RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 DIAPH3Q9NSV4 1193 aa18.51■□□□□ 0.55
TRAPPC12-203ENST00000411973 POLR3DP05423 398 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC12-203ENST00000411973 VEGFBP49765 207 aa18.5■□□□□ 0.55
TRAPPC12-203ENST00000411973 PLCD1P51178 756 aa18.5■□□□□ 0.55
TRAPPC12-203ENST00000411973 VGLL4Q14135 290 aa18.5■□□□□ 0.55
TRAPPC12-203ENST00000411973 CYP4F22Q6NT55 531 aa18.5■□□□□ 0.55
TRAPPC12-203ENST00000411973 CLMNQ96JQ2 1002 aa18.5■□□□□ 0.55
TRAPPC12-203ENST00000411973 CAPNS2Q96L46 248 aa18.5■□□□□ 0.55
TRAPPC12-203ENST00000411973 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRAPPC12-203ENST00000411973 TAOK2Q9UL54 1235 aa18.5■□□□□ 0.55
TRAPPC12-203ENST00000411973 FAM155AB1AL88 458 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 SLC10A3P09131 477 aa18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 SLURP2P0DP57 97 aa18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 SBK1Q52WX2 424 aa18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 NOL9Q5SY16 702 aaKnown RBP18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 CWC27Q6UX04 472 aaKnown RBP18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 CCDC129Q6ZRS4 1044 aa18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 RASAL3Q86YV0 1011 aa18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 SLC10A4Q96EP9 437 aa18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 DNAJC18Q9H819 358 aa18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 EPB41L4AQ9HCS5 686 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 SERPINB13Q9UIV8 391 aa18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 CSADQ9Y600 493 aa18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 WDR33Q9C0J8 1336 aaKnown RBP18.49■□□□□ 0.55
TRAPPC12-203ENST00000411973 USP17L12C9JPN9 530 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 USP17L21D6R901 530 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 CTNND1O60716 968 aaKnown RBP18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 CHMLP26374 656 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 INPP5BP32019 993 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 MFAP1P55081 439 aaKnown RBP18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 GABPAQ06546 454 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 C12orf60Q5U649 245 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 CTR9Q6PD62 1173 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 PAXIP1Q6ZW49 1069 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 ZNF589Q86UQ0 364 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 AMOTL1Q8IY63 956 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 IFNL3Q8IZI9 196 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 CRACR2BQ8N4Y2 399 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 ZKSCAN4Q969J2 545 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 NACAP1Q9BZK3 213 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 ARPP21Q9UBL0 812 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 CCDC171Q6TFL3 1326 aa18.48■□□□□ 0.55
TRAPPC12-203ENST00000411973 FAM196BA6NMK8 535 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 FOXP2O15409 715 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 APPP05067 770 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 NOGQ13253 232 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 SLC4A8Q2Y0W8 1093 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 TRIM34Q9BYJ4 488 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 SNCAIPQ9Y6H5 919 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 THSD7BQ9C0I4 1608 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 DOCK1Q14185 1865 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 LAMB1P07942 1786 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 PCNTO95613 3336 aa18.47■□□□□ 0.55
TRAPPC12-203ENST00000411973 ZBTB48P10074 688 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC12-203ENST00000411973 CYP2D6P10635 497 aa18.46■□□□□ 0.55
TRAPPC12-203ENST00000411973 MAP2K2P36507 400 aa18.46■□□□□ 0.55
TRAPPC12-203ENST00000411973 ALX1Q15699 326 aa18.46■□□□□ 0.55
TRAPPC12-203ENST00000411973 TATDN1Q6P1N9 297 aa18.46■□□□□ 0.55
TRAPPC12-203ENST00000411973 SCYL3Q8IZE3 742 aa18.46■□□□□ 0.55
TRAPPC12-203ENST00000411973 ELP3Q9H9T3 547 aa18.46■□□□□ 0.55
TRAPPC12-203ENST00000411973 ATAD5Q96QE3 1844 aa18.46■□□□□ 0.55
TRAPPC12-203ENST00000411973 RAD50Q92878 1312 aa18.46■□□□□ 0.55
TRAPPC12-203ENST00000411973 SPDYE5A6NIY4 337 aa18.45■□□□□ 0.54
TRAPPC12-203ENST00000411973 HSPD1P10809 573 aaKnown RBP18.45■□□□□ 0.54
TRAPPC12-203ENST00000411973 TDO2P48775 406 aa18.45■□□□□ 0.54
TRAPPC12-203ENST00000411973 EVX2Q03828 476 aa18.45■□□□□ 0.54
TRAPPC12-203ENST00000411973 VPS53Q5VIR6 699 aa18.45■□□□□ 0.54
TRAPPC12-203ENST00000411973 SPRYD7Q5W111 196 aa18.45■□□□□ 0.54
TRAPPC12-203ENST00000411973 ERO1BQ86YB8 467 aa18.45■□□□□ 0.54
TRAPPC12-203ENST00000411973 RUFY2Q8WXA3 655 aa18.45■□□□□ 0.54
TRAPPC12-203ENST00000411973 WNK4Q96J92 1243 aa18.45■□□□□ 0.54
TRAPPC12-203ENST00000411973 MYH8P13535 1937 aa18.45■□□□□ 0.54
TRAPPC12-203ENST00000411973 CYP2D7A0A087X1C5 515 aa18.44■□□□□ 0.54
TRAPPC12-203ENST00000411973 SHMT1P34896 483 aa18.44■□□□□ 0.54
TRAPPC12-203ENST00000411973 CAP2P40123 477 aa18.44■□□□□ 0.54
TRAPPC12-203ENST00000411973 RRP1BQ14684 758 aaKnown RBP18.44■□□□□ 0.54
TRAPPC12-203ENST00000411973 JMYQ8N9B5 988 aa18.44■□□□□ 0.54
TRAPPC12-203ENST00000411973 NAPBQ9H115 298 aa18.44■□□□□ 0.54
TRAPPC12-203ENST00000411973 GINM1Q9NU53 330 aa18.44■□□□□ 0.54
TRAPPC12-203ENST00000411973 SWAP70Q9UH65 585 aa18.44■□□□□ 0.54
TRAPPC12-203ENST00000411973 ZMYM6O95789 1325 aa18.44■□□□□ 0.54
TRAPPC12-203ENST00000411973 ROBO3Q96MS0 1386 aa18.43■□□□□ 0.54
TRAPPC12-203ENST00000411973 PPATQ06203 517 aa18.43■□□□□ 0.54
TRAPPC12-203ENST00000411973 GRM1Q13255 1194 aa18.43■□□□□ 0.54
TRAPPC12-203ENST00000411973 C16orf86Q6ZW13 317 aa18.43■□□□□ 0.54
TRAPPC12-203ENST00000411973 OPTNQ96CV9 577 aa18.43■□□□□ 0.54
TRAPPC12-203ENST00000411973 IL25Q9H293 177 aa18.43■□□□□ 0.54
TRAPPC12-203ENST00000411973 PICK1Q9NRD5 415 aa18.43■□□□□ 0.54
TRAPPC12-203ENST00000411973 PHIPQ8WWQ0 1821 aa18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 MINDY4BA8MYZ0 360 aa18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 SMIM22K7EJ46 135 aa18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 SGSM2O43147 1006 aa18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 AOC2O75106 756 aa18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 FGAP02671 866 aa18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 PTPRAP18433 802 aa18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 GJA5P36382 358 aa18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 PPIL2Q13356 520 aa18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 REM2Q8IYK8 340 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
TRAPPC12-203ENST00000411973 DYNLL2Q96FJ2 89 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms