RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 PI4KBQ9UBF8 816 aa19.72■□□□□ 0.75
NOD1-202ENST00000411552 NAV1Q8NEY1 1877 aa19.71■□□□□ 0.75
NOD1-202ENST00000411552 DDX60LQ5H9U9 1706 aaKnown RBP19.71■□□□□ 0.75
NOD1-202ENST00000411552 TRPA1O75762 1119 aa19.71■□□□□ 0.75
NOD1-202ENST00000411552 MBD4O95243 580 aa19.71■□□□□ 0.75
NOD1-202ENST00000411552 LBX1P52954 281 aa19.71■□□□□ 0.75
NOD1-202ENST00000411552 SAGE1Q9NXZ1 904 aa19.71■□□□□ 0.75
NOD1-202ENST00000411552 DOCK1Q14185 1865 aa19.71■□□□□ 0.75
NOD1-202ENST00000411552 SLC4A8Q2Y0W8 1093 aa19.7■□□□□ 0.74
NOD1-202ENST00000411552 MS4A4AQ96JQ5 239 aa19.7■□□□□ 0.74
NOD1-202ENST00000411552 HERC5Q9UII4 1024 aaKnown RBP19.7■□□□□ 0.74
NOD1-202ENST00000411552 RNF113AO15541 343 aaKnown RBP19.69■□□□□ 0.74
NOD1-202ENST00000411552 CTNND1O60716 968 aaKnown RBP19.69■□□□□ 0.74
NOD1-202ENST00000411552 INHBEP58166 350 aa19.69■□□□□ 0.74
NOD1-202ENST00000411552 PPIL2Q13356 520 aa19.69■□□□□ 0.74
NOD1-202ENST00000411552 METTL16Q86W50 562 aaKnown RBP19.69■□□□□ 0.74
NOD1-202ENST00000411552 SCYL3Q8IZE3 742 aa19.69■□□□□ 0.74
NOD1-202ENST00000411552 SDR42E1Q8WUS8 393 aa19.69■□□□□ 0.74
NOD1-202ENST00000411552 PUS7LQ9H0K6 701 aaKnown RBP19.69■□□□□ 0.74
NOD1-202ENST00000411552 IRF6O14896 467 aa19.68■□□□□ 0.74
NOD1-202ENST00000411552 PRKAB2O43741 272 aa19.68■□□□□ 0.74
NOD1-202ENST00000411552 HLA-DOAP06340 250 aa19.68■□□□□ 0.74
NOD1-202ENST00000411552 ZFYP08048 801 aaPredicted RBP19.68■□□□□ 0.74
NOD1-202ENST00000411552 GTF2A2P52657 109 aa19.68■□□□□ 0.74
NOD1-202ENST00000411552 PPATQ06203 517 aa19.68■□□□□ 0.74
NOD1-202ENST00000411552 IFNL1Q8IU54 200 aa19.68■□□□□ 0.74
NOD1-202ENST00000411552 FOXP4Q8IVH2 680 aaPredicted RBP19.68■□□□□ 0.74
NOD1-202ENST00000411552 FSD1Q9BTV5 496 aa19.68■□□□□ 0.74
NOD1-202ENST00000411552 DNAJC18Q9H819 358 aa19.68■□□□□ 0.74
NOD1-202ENST00000411552 PRDM10Q9NQV6 1147 aa19.68■□□□□ 0.74
NOD1-202ENST00000411552 ATAD5Q96QE3 1844 aa19.67■□□□□ 0.74
NOD1-202ENST00000411552 TESPA1A2RU30 521 aaPredicted RBP19.67■□□□□ 0.74
NOD1-202ENST00000411552 IGF2BP3O00425 579 aaKnown RBP eCLIP19.67■□□□□ 0.74
NOD1-202ENST00000411552 RRP1BQ14684 758 aaKnown RBP19.67■□□□□ 0.74
NOD1-202ENST00000411552 PLEKHM2Q8IWE5 1019 aa19.67■□□□□ 0.74
NOD1-202ENST00000411552 CRACR2BQ8N4Y2 399 aaPredicted RBP19.67■□□□□ 0.74
NOD1-202ENST00000411552 APPBP2Q92624 585 aa19.67■□□□□ 0.74
NOD1-202ENST00000411552 OSBP2Q969R2 916 aa19.67■□□□□ 0.74
NOD1-202ENST00000411552 DCP1AQ9NPI6 582 aaPredicted RBP19.67■□□□□ 0.74
NOD1-202ENST00000411552 PICK1Q9NRD5 415 aa19.67■□□□□ 0.74
NOD1-202ENST00000411552 BAZ2AQ9UIF9 1905 aaKnown RBP19.66■□□□□ 0.74
NOD1-202ENST00000411552 CCL15-CCL14A0A0B4J2E2 113 aa19.66■□□□□ 0.74
NOD1-202ENST00000411552 PTPRAP18433 802 aa19.66■□□□□ 0.74
NOD1-202ENST00000411552 CCL15Q16663 113 aa19.66■□□□□ 0.74
NOD1-202ENST00000411552 LRRFIP1Q32MZ4 808 aaKnown RBP19.66■□□□□ 0.74
NOD1-202ENST00000411552 TNS4Q8IZW8 715 aa19.66■□□□□ 0.74
NOD1-202ENST00000411552 BRI3BPQ8WY22 251 aa19.66■□□□□ 0.74
NOD1-202ENST00000411552 PTPN18Q99952 460 aa19.66■□□□□ 0.74
NOD1-202ENST00000411552 TRIM34Q9BYJ4 488 aa19.66■□□□□ 0.74
NOD1-202ENST00000411552 MCM9Q9NXL9 1143 aa19.66■□□□□ 0.74
NOD1-202ENST00000411552 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.66■□□□□ 0.74
NOD1-202ENST00000411552 PHIPQ8WWQ0 1821 aa19.66■□□□□ 0.74
NOD1-202ENST00000411552 CASP8AP2Q9UKL3 1982 aa19.66■□□□□ 0.74
NOD1-202ENST00000411552 SNAPC2Q13487 334 aa19.65■□□□□ 0.74
NOD1-202ENST00000411552 TTC6Q86TZ1 520 aa19.65■□□□□ 0.74
NOD1-202ENST00000411552 EVI5LQ96CN4 794 aa19.65■□□□□ 0.74
NOD1-202ENST00000411552 EHD4Q9H223 541 aa19.65■□□□□ 0.74
NOD1-202ENST00000411552 ATP8A2Q9NTI2 1148 aa19.65■□□□□ 0.74
NOD1-202ENST00000411552 ZHX2Q9Y6X8 837 aa19.65■□□□□ 0.74
NOD1-202ENST00000411552 M0R2C6 588 aa19.64■□□□□ 0.73
NOD1-202ENST00000411552 POLR3DP05423 398 aaPredicted RBP19.64■□□□□ 0.73
NOD1-202ENST00000411552 CETPP11597 493 aa19.64■□□□□ 0.73
NOD1-202ENST00000411552 CAP2P40123 477 aa19.64■□□□□ 0.73
NOD1-202ENST00000411552 PLCD1P51178 756 aa19.64■□□□□ 0.73
NOD1-202ENST00000411552 EVX2Q03828 476 aa19.64■□□□□ 0.73
NOD1-202ENST00000411552 STRBPQ96SI9 672 aaKnown RBP19.64■□□□□ 0.73
NOD1-202ENST00000411552 OSBPL3Q9H4L5 887 aa19.64■□□□□ 0.73
NOD1-202ENST00000411552 SERPINB13Q9UIV8 391 aa19.64■□□□□ 0.73
NOD1-202ENST00000411552 KCNH4Q9UQ05 1017 aa19.64■□□□□ 0.73
NOD1-202ENST00000411552 SLC4A4Q9Y6R1 1079 aa19.64■□□□□ 0.73
NOD1-202ENST00000411552 TBC1D8O95759 1140 aa19.63■□□□□ 0.73
NOD1-202ENST00000411552 ALDH1A1P00352 501 aa19.63■□□□□ 0.73
NOD1-202ENST00000411552 CCDC84Q86UT8 332 aaPredicted RBP19.63■□□□□ 0.73
NOD1-202ENST00000411552 PTPRFP10586 1907 aa19.63■□□□□ 0.73
NOD1-202ENST00000411552 GPAA1O43292 621 aa19.62■□□□□ 0.73
NOD1-202ENST00000411552 CYP2D6P10635 497 aa19.62■□□□□ 0.73
NOD1-202ENST00000411552 PDE4AP27815 886 aa19.62■□□□□ 0.73
NOD1-202ENST00000411552 JAG1P78504 1218 aa19.62■□□□□ 0.73
NOD1-202ENST00000411552 ZMYM1Q5SVZ6 1142 aa19.62■□□□□ 0.73
NOD1-202ENST00000411552 OTUD7BQ6GQQ9 843 aa19.62■□□□□ 0.73
NOD1-202ENST00000411552 SEC62Q99442 399 aaKnown RBP19.62■□□□□ 0.73
NOD1-202ENST00000411552 CFHR5Q9BXR6 569 aa19.62■□□□□ 0.73
NOD1-202ENST00000411552 R3HDMLQ9H3Y0 253 aa19.62■□□□□ 0.73
NOD1-202ENST00000411552 AFG3L2Q9Y4W6 797 aa19.62■□□□□ 0.73
NOD1-202ENST00000411552 TRIM6-TRIM34B2RNG4 842 aa19.61■□□□□ 0.73
NOD1-202ENST00000411552 GDF11O95390 407 aa19.61■□□□□ 0.73
NOD1-202ENST00000411552 SHROOM1Q2M3G4 852 aaPredicted RBP19.61■□□□□ 0.73
NOD1-202ENST00000411552 TATDN1Q6P1N9 297 aa19.61■□□□□ 0.73
NOD1-202ENST00000411552 FAM43AQ8N2R8 423 aa19.61■□□□□ 0.73
NOD1-202ENST00000411552 CYP2D7A0A087X1C5 515 aa19.6■□□□□ 0.73
NOD1-202ENST00000411552 GSG1L2A8MUP6 293 aa19.6■□□□□ 0.73
NOD1-202ENST00000411552 BTBD19C9JJ37 291 aa19.6■□□□□ 0.73
NOD1-202ENST00000411552 CXCL11O14625 94 aa19.6■□□□□ 0.73
NOD1-202ENST00000411552 SHMT1P34896 483 aa19.6■□□□□ 0.73
NOD1-202ENST00000411552 GABPAQ06546 454 aa19.6■□□□□ 0.73
NOD1-202ENST00000411552 MOGSQ13724 837 aa19.6■□□□□ 0.73
NOD1-202ENST00000411552 DDRGK1Q96HY6 314 aa19.6■□□□□ 0.73
NOD1-202ENST00000411552 A0A0G2JLL6 359 aaPredicted RBP19.59■□□□□ 0.73
NOD1-202ENST00000411552 TRIM75PA6NK02 468 aa19.59■□□□□ 0.73
NOD1-202ENST00000411552 USP17L12C9JPN9 530 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms