RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 RNF186Q9NXI6 227 aa28.39■■■□□ 2.13
R3HCC1-202ENST00000411463 CTNND1O60716 968 aaKnown RBP28.38■■■□□ 2.13
R3HCC1-202ENST00000411463 SCYL3Q8IZE3 742 aa28.38■■■□□ 2.13
R3HCC1-202ENST00000411463 SAGE1Q9NXZ1 904 aa28.38■■■□□ 2.13
R3HCC1-202ENST00000411463 TRPA1O75762 1119 aa28.37■■■□□ 2.13
R3HCC1-202ENST00000411463 HSPA8P11142 646 aaKnown RBP28.37■■■□□ 2.13
R3HCC1-202ENST00000411463 PPATQ06203 517 aa28.37■■■□□ 2.13
R3HCC1-202ENST00000411463 SLC4A8Q2Y0W8 1093 aa28.37■■■□□ 2.13
R3HCC1-202ENST00000411463 PLEKHM2Q8IWE5 1019 aa28.37■■■□□ 2.13
R3HCC1-202ENST00000411463 CRACR2BQ8N4Y2 399 aaPredicted RBP28.37■■■□□ 2.13
R3HCC1-202ENST00000411463 SDR42E1Q8WUS8 393 aa28.37■■■□□ 2.13
R3HCC1-202ENST00000411463 APPBP2Q92624 585 aa28.37■■■□□ 2.13
R3HCC1-202ENST00000411463 TSKSQ9UJT2 592 aa28.37■■■□□ 2.13
R3HCC1-202ENST00000411463 PPIL2Q13356 520 aa28.36■■■□□ 2.13
R3HCC1-202ENST00000411463 TTC6Q86TZ1 520 aa28.36■■■□□ 2.13
R3HCC1-202ENST00000411463 METTL16Q86W50 562 aaKnown RBP28.36■■■□□ 2.13
R3HCC1-202ENST00000411463 EVI5LQ96CN4 794 aa28.36■■■□□ 2.13
R3HCC1-202ENST00000411463 TRIM34Q9BYJ4 488 aa28.36■■■□□ 2.13
R3HCC1-202ENST00000411463 PICK1Q9NRD5 415 aa28.36■■■□□ 2.13
R3HCC1-202ENST00000411463 GTF2A2P52657 109 aa28.35■■■□□ 2.13
R3HCC1-202ENST00000411463 LBX1P52954 281 aa28.35■■■□□ 2.13
R3HCC1-202ENST00000411463 OSBP2Q969R2 916 aa28.35■■■□□ 2.13
R3HCC1-202ENST00000411463 MS4A4AQ96JQ5 239 aa28.35■■■□□ 2.13
R3HCC1-202ENST00000411463 DCP1AQ9NPI6 582 aaPredicted RBP28.35■■■□□ 2.13
R3HCC1-202ENST00000411463 FOCADQ5VW36 1801 aa28.35■■■□□ 2.13
R3HCC1-202ENST00000411463 IRF6O14896 467 aa28.34■■■□□ 2.13
R3HCC1-202ENST00000411463 PRKAB2O43741 272 aa28.34■■■□□ 2.13
R3HCC1-202ENST00000411463 OSBPL3Q9H4L5 887 aa28.34■■■□□ 2.13
R3HCC1-202ENST00000411463 ATP8A2Q9NTI2 1148 aa28.34■■■□□ 2.13
R3HCC1-202ENST00000411463 MCM9Q9NXL9 1143 aa28.34■■■□□ 2.13
R3HCC1-202ENST00000411463 CDK5RAP2Q96SN8 1893 aa28.34■■■□□ 2.13
R3HCC1-202ENST00000411463 IFNL1Q8IU54 200 aa28.34■■■□□ 2.13
R3HCC1-202ENST00000411463 TESPA1A2RU30 521 aaPredicted RBP28.33■■■□□ 2.13
R3HCC1-202ENST00000411463 POLR3DP05423 398 aaPredicted RBP28.33■■■□□ 2.13
R3HCC1-202ENST00000411463 STRBPQ96SI9 672 aaKnown RBP28.33■■■□□ 2.13
R3HCC1-202ENST00000411463 EHD4Q9H223 541 aa28.33■■■□□ 2.13
R3HCC1-202ENST00000411463 DNAJC18Q9H819 358 aa28.33■■■□□ 2.13
R3HCC1-202ENST00000411463 SERPINB13Q9UIV8 391 aa28.33■■■□□ 2.13
R3HCC1-202ENST00000411463 SLC4A4Q9Y6R1 1079 aa28.33■■■□□ 2.13
R3HCC1-202ENST00000411463 PTPRAP18433 802 aa28.32■■■□□ 2.12
R3HCC1-202ENST00000411463 CAP2P40123 477 aa28.32■■■□□ 2.12
R3HCC1-202ENST00000411463 SNAPC2Q13487 334 aa28.32■■■□□ 2.12
R3HCC1-202ENST00000411463 ZHX2Q9Y6X8 837 aa28.32■■■□□ 2.12
R3HCC1-202ENST00000411463 CCL15-CCL14A0A0B4J2E2 113 aa28.31■■■□□ 2.12
R3HCC1-202ENST00000411463 IGF2BP3O00425 579 aaKnown RBP eCLIP28.31■■■□□ 2.12
R3HCC1-202ENST00000411463 ALDH1A1P00352 501 aa28.31■■■□□ 2.12
R3HCC1-202ENST00000411463 PLCD1P51178 756 aa28.31■■■□□ 2.12
R3HCC1-202ENST00000411463 RRP1BQ14684 758 aaKnown RBP28.31■■■□□ 2.12
R3HCC1-202ENST00000411463 CCL15Q16663 113 aa28.31■■■□□ 2.12
R3HCC1-202ENST00000411463 OTUD7BQ6GQQ9 843 aa28.31■■■□□ 2.12
R3HCC1-202ENST00000411463 DDRGK1Q96HY6 314 aa28.31■■■□□ 2.12
R3HCC1-202ENST00000411463 PRDM10Q9NQV6 1147 aa28.31■■■□□ 2.12
R3HCC1-202ENST00000411463 CETPP11597 493 aa28.3■■■□□ 2.12
R3HCC1-202ENST00000411463 BRI3BPQ8WY22 251 aa28.3■■■□□ 2.12
R3HCC1-202ENST00000411463 PTPN18Q99952 460 aa28.3■■■□□ 2.12
R3HCC1-202ENST00000411463 MYH7P12883 1935 aa28.29■■■□□ 2.12
R3HCC1-202ENST00000411463 TRIM6-TRIM34B2RNG4 842 aa28.29■■■□□ 2.12
R3HCC1-202ENST00000411463 KCNH4Q9UQ05 1017 aa28.29■■■□□ 2.12
R3HCC1-202ENST00000411463 M0R2C6 588 aa28.28■■■□□ 2.12
R3HCC1-202ENST00000411463 GPAA1O43292 621 aa28.28■■■□□ 2.12
R3HCC1-202ENST00000411463 ZMYM1Q5SVZ6 1142 aa28.28■■■□□ 2.12
R3HCC1-202ENST00000411463 CENPBP07199 599 aaPredicted RBP28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 PDE4AP27815 886 aa28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 RILPL2Q969X0 211 aa28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 SEC62Q99442 399 aaKnown RBP28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 SIPA1L1O43166 1804 aa28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 CXCL11O14625 94 aa28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 TBC1D8O95759 1140 aa28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 TATDN1Q6P1N9 297 aa28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 TICAM2Q86XR7 235 aa28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 AFG3L2Q9Y4W6 797 aa28.27■■■□□ 2.12
R3HCC1-202ENST00000411463 CYP2D6P10635 497 aa28.26■■■□□ 2.11
R3HCC1-202ENST00000411463 GNAT2P19087 354 aa28.26■■■□□ 2.11
R3HCC1-202ENST00000411463 COL13A1Q5TAT6 717 aaPredicted RBP28.26■■■□□ 2.11
R3HCC1-202ENST00000411463 AMOTL1Q8IY63 956 aa28.26■■■□□ 2.11
R3HCC1-202ENST00000411463 CFHR5Q9BXR6 569 aa28.26■■■□□ 2.11
R3HCC1-202ENST00000411463 GSG1L2A8MUP6 293 aa28.25■■■□□ 2.11
R3HCC1-202ENST00000411463 USP17L12C9JPN9 530 aa28.25■■■□□ 2.11
R3HCC1-202ENST00000411463 USP17L21D6R901 530 aa28.25■■■□□ 2.11
R3HCC1-202ENST00000411463 ASNSP08243 561 aa28.25■■■□□ 2.11
R3HCC1-202ENST00000411463 GABPAQ06546 454 aa28.25■■■□□ 2.11
R3HCC1-202ENST00000411463 CCDC84Q86UT8 332 aaPredicted RBP28.25■■■□□ 2.11
R3HCC1-202ENST00000411463 MYH1P12882 1939 aa28.25■■■□□ 2.11
R3HCC1-202ENST00000411463 LAMB1P07942 1786 aa28.25■■■□□ 2.11
R3HCC1-202ENST00000411463 GDF11O95390 407 aa28.24■■■□□ 2.11
R3HCC1-202ENST00000411463 NEFLP07196 543 aa28.24■■■□□ 2.11
R3HCC1-202ENST00000411463 EVX2Q03828 476 aa28.24■■■□□ 2.11
R3HCC1-202ENST00000411463 GIMAP6Q6P9H5 292 aa28.24■■■□□ 2.11
R3HCC1-202ENST00000411463 GINM1Q9NU53 330 aa28.24■■■□□ 2.11
R3HCC1-202ENST00000411463 DDX60LQ5H9U9 1706 aaKnown RBP28.24■■■□□ 2.11
R3HCC1-202ENST00000411463 NAV1Q8NEY1 1877 aa28.23■■■□□ 2.11
R3HCC1-202ENST00000411463 USP17L5A8MUK1 530 aa28.23■■■□□ 2.11
R3HCC1-202ENST00000411463 JAG1P78504 1218 aa28.23■■■□□ 2.11
R3HCC1-202ENST00000411463 C12orf60Q5U649 245 aa28.23■■■□□ 2.11
R3HCC1-202ENST00000411463 TBC1D2Q9BYX2 928 aa28.23■■■□□ 2.11
R3HCC1-202ENST00000411463 TAOK2Q9UL54 1235 aa28.23■■■□□ 2.11
R3HCC1-202ENST00000411463 DOCK1Q14185 1865 aa28.23■■■□□ 2.11
R3HCC1-202ENST00000411463 TRIM75PA6NK02 468 aa28.22■■■□□ 2.11
R3HCC1-202ENST00000411463 APPP05067 770 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms