RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
RN7SKP228-201ENST00000411042 DLEC1Q9Y238 1755 aa12.37□□□□□ -0.43
RN7SKP228-201ENST00000411042 KIF13BQ9NQT8 1826 aa12.37□□□□□ -0.43
RN7SKP228-201ENST00000411042 NEDD4P46934 1319 aa12.37□□□□□ -0.43
RN7SKP228-201ENST00000411042 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
RN7SKP228-201ENST00000411042 USP17L12C9JPN9 530 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 USP17L21D6R901 530 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 CPLX1O14810 134 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 IFIT3O14879 490 aaKnown RBP12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 ZBTB43O43298 467 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 KDM4AO75164 1064 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 PPP1R37O75864 691 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 DYNLL1P63167 89 aaKnown RBP12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 TMEM67Q5HYA8 995 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 C12orf60Q5U649 245 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 STRIP1Q5VSL9 837 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 CYB5R4Q7L1T6 521 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 RTKN2Q8IZC4 609 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 SDR42E1Q8WUS8 393 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 ZNF622Q969S3 477 aaKnown RBP eCLIP12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 MAP3K14Q99558 947 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 LARP6Q9BRS8 491 aaKnown RBP12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 UBAC1Q9BSL1 405 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 LRRC2Q9BYS8 371 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 SCAND2PQ9GZW5 306 aaPredicted RBP12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 BRPF3Q9ULD4 1205 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 SNED1Q8TER0 1413 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 ELP1O95163 1332 aa12.36□□□□□ -0.43
RN7SKP228-201ENST00000411042 LAMB1P07942 1786 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 CCDC69A6NI79 296 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 GOLGA8BA8MQT2 603 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 CTDNEP1O95476 244 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 PRKAR2AP13861 404 aaKnown RBP12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 NCLP19338 710 aaKnown RBP12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 MMP14P50281 582 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 METAP2P50579 478 aaKnown RBP eCLIP12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 TGFB2P61812 414 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 CTDSPL2Q05D32 466 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 STK3Q13188 491 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 WTAPQ15007 396 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 SMYD5Q6GMV2 418 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 WASF1Q92558 559 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 ANKS1AQ92625 1134 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 PSMD1Q99460 953 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 TCP11L1Q9NUJ3 509 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 SLC12A7Q9Y666 1083 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 DDX49Q9Y6V7 483 aaKnown RBP12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 TCHHQ07283 1943 aa12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 BAZ2AQ9UIF9 1905 aaKnown RBP12.35□□□□□ -0.43
RN7SKP228-201ENST00000411042 SLX4Q8IY92 1834 aa12.34□□□□□ -0.43
RN7SKP228-201ENST00000411042 H3BQV1 296 aa12.34□□□□□ -0.43
RN7SKP228-201ENST00000411042 IFNAR1P17181 557 aa12.34□□□□□ -0.43
RN7SKP228-201ENST00000411042 KRT85P78386 507 aa12.34□□□□□ -0.43
RN7SKP228-201ENST00000411042 KIAA2012Q0VF49 1180 aa12.34□□□□□ -0.43
RN7SKP228-201ENST00000411042 SEC23AQ15436 765 aa12.34□□□□□ -0.43
RN7SKP228-201ENST00000411042 IFFO2Q5TF58 517 aa12.34□□□□□ -0.43
RN7SKP228-201ENST00000411042 MSL1Q68DK7 614 aa12.34□□□□□ -0.43
RN7SKP228-201ENST00000411042 CFAP45Q9UL16 551 aa12.34□□□□□ -0.43
RN7SKP228-201ENST00000411042 FOCADQ5VW36 1801 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 MINDY4BA8MYZ0 360 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 G3V3G9 751 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 DDAH1O94760 285 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 USP5P45974 858 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 UBE2HP62256 183 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 GTF2IP78347 998 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 CHST3Q7LGC8 479 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 DGKHQ86XP1 1220 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 FAM177A1Q8N128 213 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 TTLL6Q8N841 843 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 SYAP1Q96A49 352 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 ZSCAN10Q96SZ4 725 aaPredicted RBP12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 RBM28Q9NW13 759 aaKnown RBP12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 MYO3BQ8WXR4 1341 aa12.33□□□□□ -0.44
RN7SKP228-201ENST00000411042 VPS37CA5D8V6 355 aaPredicted RBP12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 JAK2O60674 1132 aa12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 PRPF40AO75400 957 aaKnown RBP12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 BTDP43251 543 aa12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 RHBDL3P58872 404 aa12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 NTRK3Q16288 839 aa12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 NFXL1Q6ZNB6 911 aa12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 BRAPQ7Z569 592 aa12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 FBXO18Q8NFZ0 1043 aa12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 MCM9Q9NXL9 1143 aa12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 RBM27Q9P2N5 1060 aaKnown RBP12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 ORC3Q9UBD5 711 aaPredicted RBP12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 TACC3Q9Y6A5 838 aa12.32□□□□□ -0.44
RN7SKP228-201ENST00000411042 GOLGA8AA7E2F4 631 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 LETM1O95202 739 aaPredicted RBP12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 FDPSP14324 419 aaKnown RBP12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 RESTQ13127 1097 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 CDC37L1Q7L3B6 337 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 TTC6Q86TZ1 520 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 TEX11Q8IYF3 940 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms