RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CAPN12Q6ZSI9 719 aa4.27□□□□□ -1.73
RNU6-1140P-201ENST00000410517 TMC1Q8TDI8 760 aa4.27□□□□□ -1.73
RNU6-1140P-201ENST00000410517 WDR18Q9BV38 432 aa4.27□□□□□ -1.73
RNU6-1140P-201ENST00000410517 CARS2Q9HA77 564 aaKnown RBP4.27□□□□□ -1.73
RNU6-1140P-201ENST00000410517 C19orf73Q9NVV2 129 aa4.27□□□□□ -1.73
RNU6-1140P-201ENST00000410517 A6NHS1 94 aa4.26□□□□□ -1.73
RNU6-1140P-201ENST00000410517 OVOL3O00110 214 aa4.26□□□□□ -1.73
RNU6-1140P-201ENST00000410517 INSRRP14616 1297 aa4.26□□□□□ -1.73
RNU6-1140P-201ENST00000410517 C8orf34Q49A92 452 aa4.26□□□□□ -1.73
RNU6-1140P-201ENST00000410517 PHLDB3Q6NSJ2 640 aa4.26□□□□□ -1.73
RNU6-1140P-201ENST00000410517 XKR5Q6UX68 686 aa4.26□□□□□ -1.73
RNU6-1140P-201ENST00000410517 TOP6BLQ8N6T0 577 aa4.26□□□□□ -1.73
RNU6-1140P-201ENST00000410517 HEXIM2Q96MH2 286 aaKnown RBP4.26□□□□□ -1.73
RNU6-1140P-201ENST00000410517 ATXN3LQ9H3M9 355 aa4.26□□□□□ -1.73
RNU6-1140P-201ENST00000410517 MYO15BQ96JP2 1530 aa4.26□□□□□ -1.73
RNU6-1140P-201ENST00000410517 EREGO14944 169 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 TMPRSS2O15393 492 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 TRIM13O60858 407 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 NPR3P17342 541 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 PUM1Q14671 1186 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 TCERG1LQ5VWI1 586 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 ATCAYQ86WG3 371 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 SPACA3Q8IXA5 215 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 ABHD4Q8TB40 342 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 BAHD1Q8TBE0 780 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 DDX54Q8TDD1 881 aaKnown RBP4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 ASB16Q96NS5 453 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 FANCD2OSQ96PS1 177 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 TRIM56Q9BRZ2 755 aaKnown RBP4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 CLEC4MQ9H2X3 399 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 LATS2Q9NRM7 1088 aa4.25□□□□□ -1.73
RNU6-1140P-201ENST00000410517 E9PSI1 815 aa4.24□□□□□ -1.73
RNU6-1140P-201ENST00000410517 NKPD1Q17RQ9 610 aa4.24□□□□□ -1.73
RNU6-1140P-201ENST00000410517 RGS22Q8NE09 1264 aa4.24□□□□□ -1.73
RNU6-1140P-201ENST00000410517 BCL2L13Q9BXK5 485 aa4.24□□□□□ -1.73
RNU6-1140P-201ENST00000410517 RBCK1Q9BYM8 510 aa4.24□□□□□ -1.73
RNU6-1140P-201ENST00000410517 GGNBP2Q9H3C7 697 aa4.24□□□□□ -1.73
RNU6-1140P-201ENST00000410517 SYNGAP1Q96PV0 1343 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 A0A096LPE4 126 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 A0A1W2PPZ6 126 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 OTOL1A6NHN0 477 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 SASH1O94885 1247 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 HCLS1P14317 486 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 LIG1P18858 919 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 MPSTP25325 297 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 MZF1P28698 734 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 EIF1AXP47813 144 aaKnown RBP4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 DNM1Q05193 864 aaKnown RBP4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 TTLL4Q14679 1199 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 EAPPQ56P03 285 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 EDEM1Q92611 657 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 CRELD1Q96HD1 420 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 XYLT2Q9H1B5 865 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 SSU72Q9NP77 194 aaKnown RBP4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 DISC1Q9NRI5 854 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 SLAIN2Q9P270 581 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 SEPT3Q9UH03 358 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 GTF2IRD1Q9UHL9 959 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 PCOLCE2Q9UKZ9 415 aa4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 CNOT6Q9ULM6 557 aaKnown RBP4.23□□□□□ -1.73
RNU6-1140P-201ENST00000410517 AKAP8O43823 692 aaKnown RBP4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 PHACTR2O75167 634 aa4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 SLFN14P0C7P3 912 aa4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 SRFP11831 508 aa4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 RAC2P15153 192 aa4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 RBM25P49756 843 aaKnown RBP4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 DLG4P78352 724 aa4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 ID3Q02535 119 aa4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 SPRED3Q2MJR0 410 aa4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 PEAR1Q5VY43 1037 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 ALKBH8Q96BT7 664 aaKnown RBP4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 WDR89Q96FK6 387 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 FRMD6Q96NE9 622 aa4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 MRS2Q9HD23 443 aa4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 ANO2Q9NQ90 1003 aa4.22□□□□□ -1.73
RNU6-1140P-201ENST00000410517 RBM47A0AV96 593 aaKnown RBP4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ANKRD33BA6NCL7 494 aa4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 GNAT3A8MTJ3 354 aa4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 CLCN7P51798 805 aa4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 XPCQ01831 940 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 SPATS1Q496A3 300 aa4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ZNF385BQ569K4 471 aa4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 FAM214BQ7L5A3 538 aa4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 NPAS4Q8IUM7 802 aa4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 CCDC120Q96HB5 630 aa4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ATP13A1Q9HD20 1204 aa4.21□□□□□ -1.74
RNU6-1140P-201ENST00000410517 IGF2BP3O00425 579 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ARHGAP4P98171 946 aa4.2□□□□□ -1.74
RNU6-1140P-201ENST00000410517 PLCB3Q01970 1234 aa4.2□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ALG1LQ6GMV1 187 aa4.2□□□□□ -1.74
RNU6-1140P-201ENST00000410517 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ZDHHC14Q8IZN3 488 aa4.2□□□□□ -1.74
RNU6-1140P-201ENST00000410517 FBF1Q8TES7 1133 aa4.2□□□□□ -1.74
RNU6-1140P-201ENST00000410517 ZC3H12CQ9C0D7 883 aaKnown RBP4.2□□□□□ -1.74
RNU6-1140P-201ENST00000410517 DNAJC25Q9H1X3 360 aa4.2□□□□□ -1.74
RNU6-1140P-201ENST00000410517 KCTD3Q9Y597 815 aa4.2□□□□□ -1.74
RNU6-1140P-201ENST00000410517 RFXAPO00287 272 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 PDGFAP04085 211 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 TMEM132EQ6IEE7 984 aa4.19□□□□□ -1.74
RNU6-1140P-201ENST00000410517 DNAJC14Q6Y2X3 702 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms