RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 HSPA4P34932 840 aa18.11■□□□□ 0.49
LSM5-207ENST00000410044 IMMTQ16891 758 aaKnown RBP18.11■□□□□ 0.49
LSM5-207ENST00000410044 HERC5Q9UII4 1024 aaKnown RBP18.11■□□□□ 0.49
LSM5-207ENST00000410044 SERPINB13Q9UIV8 391 aa18.11■□□□□ 0.49
LSM5-207ENST00000410044 LAMB1P07942 1786 aa18.11■□□□□ 0.49
LSM5-207ENST00000410044 LAMA4Q16363 1823 aa18.11■□□□□ 0.49
LSM5-207ENST00000410044 CYP2D7A0A087X1C5 515 aa18.1■□□□□ 0.49
LSM5-207ENST00000410044 CYP21A2P08686 494 aa18.1■□□□□ 0.49
LSM5-207ENST00000410044 PCP11498 1178 aaKnown RBP18.1■□□□□ 0.49
LSM5-207ENST00000410044 PRAMEF18Q5VWM3 479 aa18.1■□□□□ 0.49
LSM5-207ENST00000410044 C16orf86Q6ZW13 317 aa18.1■□□□□ 0.49
LSM5-207ENST00000410044 CDAN1Q8IWY9 1227 aa18.1■□□□□ 0.49
LSM5-207ENST00000410044 SMC1BQ8NDV3 1235 aa18.1■□□□□ 0.49
LSM5-207ENST00000410044 CDCA5Q96FF9 252 aa18.1■□□□□ 0.49
LSM5-207ENST00000410044 SWAP70Q9UH65 585 aa18.1■□□□□ 0.49
LSM5-207ENST00000410044 SMIM22K7EJ46 135 aa18.09■□□□□ 0.49
LSM5-207ENST00000410044 SLC27A2O14975 620 aa18.09■□□□□ 0.49
LSM5-207ENST00000410044 SLC3A2P08195 630 aaKnown RBP18.09■□□□□ 0.49
LSM5-207ENST00000410044 EVX2Q03828 476 aa18.09■□□□□ 0.49
LSM5-207ENST00000410044 RNF20Q5VTR2 975 aa18.09■□□□□ 0.49
LSM5-207ENST00000410044 CREB3L3Q68CJ9 461 aa18.09■□□□□ 0.49
LSM5-207ENST00000410044 TATDN1Q6P1N9 297 aa18.09■□□□□ 0.49
LSM5-207ENST00000410044 DLK2Q6UY11 383 aa18.09■□□□□ 0.49
LSM5-207ENST00000410044 NBPF3Q9H094 633 aa18.09■□□□□ 0.49
LSM5-207ENST00000410044 NT5C2P49902 561 aa18.08■□□□□ 0.48
LSM5-207ENST00000410044 FSTL1Q12841 308 aa18.08■□□□□ 0.48
LSM5-207ENST00000410044 DCAF15Q66K64 600 aa18.08■□□□□ 0.48
LSM5-207ENST00000410044 STAG1Q8WVM7 1258 aa18.08■□□□□ 0.48
LSM5-207ENST00000410044 IL17RAQ96F46 866 aa18.08■□□□□ 0.48
LSM5-207ENST00000410044 DNAJC18Q9H819 358 aa18.08■□□□□ 0.48
LSM5-207ENST00000410044 ZNF112Q9UJU3 913 aa18.08■□□□□ 0.48
LSM5-207ENST00000410044 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.08■□□□□ 0.48
LSM5-207ENST00000410044 TRPM7Q96QT4 1865 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 PASKQ96RG2 1323 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 ORC4O43929 436 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 USP2O75604 605 aaPredicted RBP18.07■□□□□ 0.48
LSM5-207ENST00000410044 NF2P35240 595 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 CDK8P49336 464 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 CTDSPL2Q05D32 466 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 MAP3K11Q16584 847 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 AKNAD1Q5T1N1 836 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 DYNLL2Q96FJ2 89 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.07■□□□□ 0.48
LSM5-207ENST00000410044 ZNF287Q9HBT7 754 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 TACC3Q9Y6A5 838 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 SSC5DA1L4H1 1573 aa18.07■□□□□ 0.48
LSM5-207ENST00000410044 PHF20L1A8MW92 1017 aa18.06■□□□□ 0.48
LSM5-207ENST00000410044 TRAF5O00463 557 aa18.06■□□□□ 0.48
LSM5-207ENST00000410044 SHMT1P34896 483 aa18.06■□□□□ 0.48
LSM5-207ENST00000410044 HAND2P61296 217 aa18.06■□□□□ 0.48
LSM5-207ENST00000410044 PDE4BQ07343 736 aa18.06■□□□□ 0.48
LSM5-207ENST00000410044 MIGA2Q7L4E1 593 aa18.06■□□□□ 0.48
LSM5-207ENST00000410044 CRACR2BQ8N4Y2 399 aaPredicted RBP18.06■□□□□ 0.48
LSM5-207ENST00000410044 ZNF341Q9BYN7 854 aa18.06■□□□□ 0.48
LSM5-207ENST00000410044 RNF41Q9H4P4 317 aaPredicted RBP18.06■□□□□ 0.48
LSM5-207ENST00000410044 UNCXA6NJT0 531 aa18.05■□□□□ 0.48
LSM5-207ENST00000410044 PPP1R12BO60237 982 aaPredicted RBP18.05■□□□□ 0.48
LSM5-207ENST00000410044 ZKSCAN1P17029 563 aaPredicted RBP18.05■□□□□ 0.48
LSM5-207ENST00000410044 MCCP23508 829 aa18.05■□□□□ 0.48
LSM5-207ENST00000410044 FKBP1BP68106 108 aa18.05■□□□□ 0.48
LSM5-207ENST00000410044 SLC4A8Q2Y0W8 1093 aa18.05■□□□□ 0.48
LSM5-207ENST00000410044 MFSD6Q6ZSS7 791 aa18.05■□□□□ 0.48
LSM5-207ENST00000410044 TBC1D10CQ8IV04 446 aa18.05■□□□□ 0.48
LSM5-207ENST00000410044 RASEFQ8IZ41 740 aa18.05■□□□□ 0.48
LSM5-207ENST00000410044 KLRG1Q96E93 195 aa18.05■□□□□ 0.48
LSM5-207ENST00000410044 CCDC17Q96LX7 622 aa18.05■□□□□ 0.48
LSM5-207ENST00000410044 MYH8P13535 1937 aa18.04■□□□□ 0.48
LSM5-207ENST00000410044 E7EWF7 191 aa18.04■□□□□ 0.48
LSM5-207ENST00000410044 SLURP2P0DP57 97 aa18.04■□□□□ 0.48
LSM5-207ENST00000410044 RASA1P20936 1047 aa18.04■□□□□ 0.48
LSM5-207ENST00000410044 RBM25P49756 843 aaKnown RBP18.04■□□□□ 0.48
LSM5-207ENST00000410044 ANAPC15P60006 121 aa18.04■□□□□ 0.48
LSM5-207ENST00000410044 FMR1Q06787 632 aaKnown RBP eCLIP18.04■□□□□ 0.48
LSM5-207ENST00000410044 CNNM2Q9H8M5 875 aa18.04■□□□□ 0.48
LSM5-207ENST00000410044 GINM1Q9NU53 330 aa18.04■□□□□ 0.48
LSM5-207ENST00000410044 SNX14Q9Y5W7 946 aa18.04■□□□□ 0.48
LSM5-207ENST00000410044 TAF6LQ9Y6J9 622 aa18.04■□□□□ 0.48
LSM5-207ENST00000410044 KRT32Q14532 448 aa18.03■□□□□ 0.48
LSM5-207ENST00000410044 CST9Q5W186 159 aa18.03■□□□□ 0.48
LSM5-207ENST00000410044 STOX1Q6ZVD7 989 aa18.03■□□□□ 0.48
LSM5-207ENST00000410044 SLC44A5Q8NCS7 719 aa18.03■□□□□ 0.48
LSM5-207ENST00000410044 TRIM34Q9BYJ4 488 aa18.03■□□□□ 0.48
LSM5-207ENST00000410044 KRT23Q9C075 422 aa18.03■□□□□ 0.48
LSM5-207ENST00000410044 UPF2Q9HAU5 1272 aaKnown RBP18.03■□□□□ 0.48
LSM5-207ENST00000410044 MKNK2Q9HBH9 465 aa18.03■□□□□ 0.48
LSM5-207ENST00000410044 INCENPQ9NQS7 918 aa18.03■□□□□ 0.48
LSM5-207ENST00000410044 FAM196BA6NMK8 535 aa18.02■□□□□ 0.48
LSM5-207ENST00000410044 CTNND1O60716 968 aaKnown RBP18.02■□□□□ 0.48
LSM5-207ENST00000410044 CAP2P40123 477 aa18.02■□□□□ 0.48
LSM5-207ENST00000410044 RRP1BQ14684 758 aaKnown RBP18.02■□□□□ 0.48
LSM5-207ENST00000410044 CERKLQ49MI3 558 aaPredicted RBP18.02■□□□□ 0.48
LSM5-207ENST00000410044 LDLRAD1Q5T700 205 aa18.02■□□□□ 0.48
LSM5-207ENST00000410044 ZNF444Q8N0Y2 327 aaPredicted RBP18.02■□□□□ 0.48
LSM5-207ENST00000410044 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.02■□□□□ 0.482e-7■□□□□ 9.7
LSM5-207ENST00000410044 C22orf23Q9BZE7 217 aa18.02■□□□□ 0.48
LSM5-207ENST00000410044 CELF2O95319 508 aaKnown RBP18.01■□□□□ 0.47
LSM5-207ENST00000410044 IREB2P48200 963 aaKnown RBP18.01■□□□□ 0.47
LSM5-207ENST00000410044 MAP3K9P80192 1104 aa18.01■□□□□ 0.47
LSM5-207ENST00000410044 NOL9Q5SY16 702 aaKnown RBP18.01■□□□□ 0.47
LSM5-207ENST00000410044 ARMC9Q7Z3E5 817 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms