RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 MCM9Q9NXL9 1143 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 SLC3A2P08195 630 aaKnown RBP6.48□□□□□ -1.37
EPHA4-202ENST00000409854 ZSCAN22P10073 491 aaPredicted RBP6.48□□□□□ -1.37
EPHA4-202ENST00000409854 PDCP20941 246 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 HMGN5P82970 282 aaKnown RBP6.48□□□□□ -1.37
EPHA4-202ENST00000409854 TMEM67Q5HYA8 995 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 TEKT1Q969V4 418 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 SENP2Q9HC62 589 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 MTMR6Q9Y217 621 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 MYO3BQ8WXR4 1341 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 LTBP3Q9NS15 1303 aa6.48□□□□□ -1.37
EPHA4-202ENST00000409854 GOLGA8BA8MQT2 603 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 JAK2O60674 1132 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 CRKP46108 304 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 SART3Q15020 963 aaKnown RBP6.47□□□□□ -1.37
EPHA4-202ENST00000409854 DALRD3Q5D0E6 543 aaKnown RBP6.47□□□□□ -1.37
EPHA4-202ENST00000409854 APOBEC3HQ6NTF7 200 aaKnown RBP6.47□□□□□ -1.37
EPHA4-202ENST00000409854 TMTC2Q8N394 836 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 FBXW7Q969H0 707 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 ZMYND15Q9H091 742 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 SERPINA10Q9UK55 444 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 PTPDC1A2A3K4 754 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 IFIT3O14879 490 aaKnown RBP6.47□□□□□ -1.37
EPHA4-202ENST00000409854 NPM3O75607 178 aaKnown RBP6.47□□□□□ -1.37
EPHA4-202ENST00000409854 WDHD1O75717 1129 aaPredicted RBP6.47□□□□□ -1.37
EPHA4-202ENST00000409854 F13A1P00488 732 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 PTMSP20962 102 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 PDE4BQ07343 736 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
EPHA4-202ENST00000409854 MAPKAPK5Q8IW41 473 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 ZSCAN10Q96SZ4 725 aaPredicted RBP6.47□□□□□ -1.37
EPHA4-202ENST00000409854 NCOA5Q9HCD5 579 aaKnown RBP6.47□□□□□ -1.37
EPHA4-202ENST00000409854 TNKSO95271 1327 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 PLIN4Q96Q06 1357 aa6.47□□□□□ -1.37
EPHA4-202ENST00000409854 DHX16O60231 1041 aaKnown RBP6.46□□□□□ -1.37
EPHA4-202ENST00000409854 VIL1P09327 827 aaKnown RBP6.46□□□□□ -1.37
EPHA4-202ENST00000409854 CCT2P78371 535 aaKnown RBP6.46□□□□□ -1.37
EPHA4-202ENST00000409854 WTAPQ15007 396 aa6.46□□□□□ -1.37
EPHA4-202ENST00000409854 C16orf86Q6ZW13 317 aa6.46□□□□□ -1.37
EPHA4-202ENST00000409854 AMOTL1Q8IY63 956 aa6.46□□□□□ -1.37
EPHA4-202ENST00000409854 ENAHQ8N8S7 591 aaPredicted RBP6.46□□□□□ -1.37
EPHA4-202ENST00000409854 GMLQ99445 158 aa6.46□□□□□ -1.37
EPHA4-202ENST00000409854 FAM217BQ9NTX9 383 aaPredicted RBP6.46□□□□□ -1.37
EPHA4-202ENST00000409854 BCCIPQ9P287 314 aaKnown RBP eCLIP6.46□□□□□ -1.37
EPHA4-202ENST00000409854 F8W031 263 aaPredicted RBP6.46□□□□□ -1.38
EPHA4-202ENST00000409854 ZBTB43O43298 467 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 FDPSP14324 419 aaKnown RBP6.46□□□□□ -1.38
EPHA4-202ENST00000409854 IARSP41252 1262 aaKnown RBP6.46□□□□□ -1.38
EPHA4-202ENST00000409854 SCNN1DP51172 638 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 PLCD1P51178 756 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 NTRK3Q16288 839 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 LARP1BQ659C4 914 aaKnown RBP6.46□□□□□ -1.38
EPHA4-202ENST00000409854 CDC42EP5Q6NZY7 148 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 UBAC1Q9BSL1 405 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 ZNF277Q9NRM2 450 aaPredicted RBP6.46□□□□□ -1.38
EPHA4-202ENST00000409854 TCP11L1Q9NUJ3 509 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 TAOK2Q9UL54 1235 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 ERICH2A1L162 156 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 PSDA5PKW4 1024 aaPredicted RBP6.46□□□□□ -1.38
EPHA4-202ENST00000409854 NFKBIEO00221 500 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 METAP2P50579 478 aaKnown RBP eCLIP6.46□□□□□ -1.38
EPHA4-202ENST00000409854 GABPAQ06546 454 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 RSBN1LQ6PCB5 846 aaPredicted RBP6.46□□□□□ -1.38
EPHA4-202ENST00000409854 IQCA1Q86XH1 822 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 ANKS1AQ92625 1134 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 IDI2Q9BXS1 227 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 DDX4Q9NQI0 724 aaKnown RBP6.46□□□□□ -1.38
EPHA4-202ENST00000409854 TOMM22Q9NS69 142 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 STK36Q9NRP7 1315 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 ATAD5Q96QE3 1844 aa6.46□□□□□ -1.38
EPHA4-202ENST00000409854 CCDC69A6NI79 296 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 PRDM1O75626 825 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 CDC27P30260 824 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 NOVP48745 357 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 PPP2R5BQ15173 497 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 CDC37L1Q7L3B6 337 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 KIAA0825Q8IV33 1275 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 ZNF654Q8IZM8 581 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 STK11IPQ8N1F8 1099 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 LARGE2Q8N3Y3 721 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 DYNLL2Q96FJ2 89 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 ZKSCAN3Q9BRR0 538 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 OSBPL5Q9H0X9 879 aaPredicted RBP6.45□□□□□ -1.38
EPHA4-202ENST00000409854 USP40Q9NVE5 1235 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 KIF3AQ9Y496 699 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 SLC12A7Q9Y666 1083 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 ATRNL1Q5VV63 1379 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 RANBP6O60518 1105 aaKnown RBP6.45□□□□□ -1.38
EPHA4-202ENST00000409854 DTNBO60941 627 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 POLR3DP05423 398 aaPredicted RBP6.45□□□□□ -1.38
EPHA4-202ENST00000409854 RASA1P20936 1047 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 RCSD1Q6JBY9 416 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 NFXL1Q6ZNB6 911 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 TMEM87AQ8NBN3 555 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 TAOK3Q9H2K8 898 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 ZNF287Q9HBT7 754 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 SAP30BPQ9UHR5 308 aaKnown RBP6.45□□□□□ -1.38
EPHA4-202ENST00000409854 GOLGA8AA7E2F4 631 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 PSMD14O00487 310 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms