RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 TSKSQ9UJT2 592 aa37.64■■■■□ 3.62
TRAF3IP1-203ENST00000409739 PALD1Q9ULE6 856 aa37.64■■■■□ 3.62
TRAF3IP1-203ENST00000409739 MBD4O95243 580 aa37.63■■■■□ 3.61
TRAF3IP1-203ENST00000409739 CRNKL1Q9BZJ0 848 aaKnown RBP37.63■■■■□ 3.61
TRAF3IP1-203ENST00000409739 ARMT1Q9H993 441 aa37.62■■■■□ 3.61
TRAF3IP1-203ENST00000409739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP37.62■■■■□ 3.61
TRAF3IP1-203ENST00000409739 RNF186Q9NXI6 227 aa37.62■■■■□ 3.61
TRAF3IP1-203ENST00000409739 SAGE1Q9NXZ1 904 aa37.62■■■■□ 3.61
TRAF3IP1-203ENST00000409739 CASP8AP2Q9UKL3 1982 aa37.62■■■■□ 3.61
TRAF3IP1-203ENST00000409739 MYH8P13535 1937 aa37.61■■■■□ 3.61
TRAF3IP1-203ENST00000409739 LBX1P52954 281 aa37.6■■■■□ 3.61
TRAF3IP1-203ENST00000409739 HERC5Q9UII4 1024 aaKnown RBP37.6■■■■□ 3.61
TRAF3IP1-203ENST00000409739 SLC4A8Q2Y0W8 1093 aa37.59■■■■□ 3.61
TRAF3IP1-203ENST00000409739 SCYL3Q8IZE3 742 aa37.59■■■■□ 3.61
TRAF3IP1-203ENST00000409739 PUS7LQ9H0K6 701 aaKnown RBP37.59■■■■□ 3.61
TRAF3IP1-203ENST00000409739 TRPA1O75762 1119 aa37.58■■■■□ 3.61
TRAF3IP1-203ENST00000409739 PPIL2Q13356 520 aa37.58■■■■□ 3.61
TRAF3IP1-203ENST00000409739 METTL16Q86W50 562 aaKnown RBP37.58■■■■□ 3.61
TRAF3IP1-203ENST00000409739 SDR42E1Q8WUS8 393 aa37.58■■■■□ 3.61
TRAF3IP1-203ENST00000409739 MS4A4AQ96JQ5 239 aa37.58■■■■□ 3.61
TRAF3IP1-203ENST00000409739 RNF113AO15541 343 aaKnown RBP37.57■■■■□ 3.6
TRAF3IP1-203ENST00000409739 CTNND1O60716 968 aaKnown RBP37.57■■■■□ 3.6
TRAF3IP1-203ENST00000409739 HLA-DOAP06340 250 aa37.57■■■■□ 3.6
TRAF3IP1-203ENST00000409739 PPATQ06203 517 aa37.57■■■■□ 3.6
TRAF3IP1-203ENST00000409739 DNAJC18Q9H819 358 aa37.57■■■■□ 3.6
TRAF3IP1-203ENST00000409739 ZFYP08048 801 aaPredicted RBP37.56■■■■□ 3.6
TRAF3IP1-203ENST00000409739 INHBEP58166 350 aa37.56■■■■□ 3.6
TRAF3IP1-203ENST00000409739 APPBP2Q92624 585 aa37.56■■■■□ 3.6
TRAF3IP1-203ENST00000409739 FSD1Q9BTV5 496 aa37.56■■■■□ 3.6
TRAF3IP1-203ENST00000409739 TESPA1A2RU30 521 aaPredicted RBP37.55■■■■□ 3.6
TRAF3IP1-203ENST00000409739 IRF6O14896 467 aa37.55■■■■□ 3.6
TRAF3IP1-203ENST00000409739 DCP1AQ9NPI6 582 aaPredicted RBP37.55■■■■□ 3.6
TRAF3IP1-203ENST00000409739 PRDM10Q9NQV6 1147 aa37.55■■■■□ 3.6
TRAF3IP1-203ENST00000409739 PRKAB2O43741 272 aa37.54■■■■□ 3.6
TRAF3IP1-203ENST00000409739 GTF2A2P52657 109 aa37.54■■■■□ 3.6
TRAF3IP1-203ENST00000409739 IFNL1Q8IU54 200 aa37.54■■■■□ 3.6
TRAF3IP1-203ENST00000409739 FOXP4Q8IVH2 680 aaPredicted RBP37.54■■■■□ 3.6
TRAF3IP1-203ENST00000409739 PLEKHM2Q8IWE5 1019 aa37.54■■■■□ 3.6
TRAF3IP1-203ENST00000409739 CRACR2BQ8N4Y2 399 aaPredicted RBP37.54■■■■□ 3.6
TRAF3IP1-203ENST00000409739 OSBP2Q969R2 916 aa37.54■■■■□ 3.6
TRAF3IP1-203ENST00000409739 PICK1Q9NRD5 415 aa37.54■■■■□ 3.6
TRAF3IP1-203ENST00000409739 IGF2BP3O00425 579 aaKnown RBP eCLIP37.53■■■■□ 3.6
TRAF3IP1-203ENST00000409739 RRP1BQ14684 758 aaKnown RBP37.53■■■■□ 3.6
TRAF3IP1-203ENST00000409739 LRRFIP1Q32MZ4 808 aaKnown RBP37.53■■■■□ 3.6
TRAF3IP1-203ENST00000409739 BRI3BPQ8WY22 251 aa37.52■■■■□ 3.6
TRAF3IP1-203ENST00000409739 TRIM34Q9BYJ4 488 aa37.52■■■■□ 3.6
TRAF3IP1-203ENST00000409739 CCL15-CCL14A0A0B4J2E2 113 aa37.51■■■■□ 3.6
TRAF3IP1-203ENST00000409739 PTPRAP18433 802 aa37.51■■■■□ 3.6
TRAF3IP1-203ENST00000409739 CCL15Q16663 113 aa37.51■■■■□ 3.6
TRAF3IP1-203ENST00000409739 EVI5LQ96CN4 794 aa37.51■■■■□ 3.6
TRAF3IP1-203ENST00000409739 PTPN18Q99952 460 aa37.51■■■■□ 3.6
TRAF3IP1-203ENST00000409739 EHD4Q9H223 541 aa37.51■■■■□ 3.6
TRAF3IP1-203ENST00000409739 OSBPL3Q9H4L5 887 aa37.51■■■■□ 3.6
TRAF3IP1-203ENST00000409739 MCM9Q9NXL9 1143 aa37.51■■■■□ 3.6
TRAF3IP1-203ENST00000409739 FRMD4AQ9P2Q2 1039 aaPredicted RBP37.51■■■■□ 3.6
TRAF3IP1-203ENST00000409739 SNAPC2Q13487 334 aa37.5■■■■□ 3.59
TRAF3IP1-203ENST00000409739 TTC6Q86TZ1 520 aa37.5■■■■□ 3.59
TRAF3IP1-203ENST00000409739 ATP8A2Q9NTI2 1148 aa37.5■■■■□ 3.59
TRAF3IP1-203ENST00000409739 KCNH4Q9UQ05 1017 aa37.5■■■■□ 3.59
TRAF3IP1-203ENST00000409739 POLR3DP05423 398 aaPredicted RBP37.49■■■■□ 3.59
TRAF3IP1-203ENST00000409739 CAP2P40123 477 aa37.49■■■■□ 3.59
TRAF3IP1-203ENST00000409739 PLCD1P51178 756 aa37.49■■■■□ 3.59
TRAF3IP1-203ENST00000409739 COL13A1Q5TAT6 717 aaPredicted RBP37.49■■■■□ 3.59
TRAF3IP1-203ENST00000409739 SERPINB13Q9UIV8 391 aa37.49■■■■□ 3.59
TRAF3IP1-203ENST00000409739 SLC4A4Q9Y6R1 1079 aa37.49■■■■□ 3.59
TRAF3IP1-203ENST00000409739 M0R2C6 588 aa37.48■■■■□ 3.59
TRAF3IP1-203ENST00000409739 ALDH1A1P00352 501 aa37.48■■■■□ 3.59
TRAF3IP1-203ENST00000409739 STRBPQ96SI9 672 aaKnown RBP37.48■■■■□ 3.59
TRAF3IP1-203ENST00000409739 CETPP11597 493 aa37.47■■■■□ 3.59
TRAF3IP1-203ENST00000409739 ZHX2Q9Y6X8 837 aa37.47■■■■□ 3.59
TRAF3IP1-203ENST00000409739 GPAA1O43292 621 aa37.46■■■■□ 3.59
TRAF3IP1-203ENST00000409739 PDE4AP27815 886 aa37.46■■■■□ 3.59
TRAF3IP1-203ENST00000409739 EVX2Q03828 476 aa37.46■■■■□ 3.59
TRAF3IP1-203ENST00000409739 CCDC84Q86UT8 332 aaPredicted RBP37.46■■■■□ 3.59
TRAF3IP1-203ENST00000409739 CFHR5Q9BXR6 569 aa37.46■■■■□ 3.59
TRAF3IP1-203ENST00000409739 LOC285556D6RIA3 1793 aa37.45■■■■□ 3.59
TRAF3IP1-203ENST00000409739 TBC1D8O95759 1140 aa37.45■■■■□ 3.59
TRAF3IP1-203ENST00000409739 ZMYM1Q5SVZ6 1142 aa37.45■■■■□ 3.59
TRAF3IP1-203ENST00000409739 SEC62Q99442 399 aaKnown RBP37.45■■■■□ 3.59
TRAF3IP1-203ENST00000409739 CYP2D6P10635 497 aa37.44■■■■□ 3.58
TRAF3IP1-203ENST00000409739 OTUD7BQ6GQQ9 843 aa37.44■■■■□ 3.58
TRAF3IP1-203ENST00000409739 AFG3L2Q9Y4W6 797 aa37.44■■■■□ 3.58
TRAF3IP1-203ENST00000409739 GABPAQ06546 454 aa37.43■■■■□ 3.58
TRAF3IP1-203ENST00000409739 CXCL11O14625 94 aa37.42■■■■□ 3.58
TRAF3IP1-203ENST00000409739 GDF11O95390 407 aa37.42■■■■□ 3.58
TRAF3IP1-203ENST00000409739 JAG1P78504 1218 aa37.42■■■■□ 3.58
TRAF3IP1-203ENST00000409739 SHROOM1Q2M3G4 852 aaPredicted RBP37.42■■■■□ 3.58
TRAF3IP1-203ENST00000409739 TATDN1Q6P1N9 297 aa37.42■■■■□ 3.58
TRAF3IP1-203ENST00000409739 FAM43AQ8N2R8 423 aa37.42■■■■□ 3.58
TRAF3IP1-203ENST00000409739 DDRGK1Q96HY6 314 aa37.42■■■■□ 3.58
TRAF3IP1-203ENST00000409739 R3HDMLQ9H3Y0 253 aa37.42■■■■□ 3.58
TRAF3IP1-203ENST00000409739 TRIM6-TRIM34B2RNG4 842 aa37.41■■■■□ 3.58
TRAF3IP1-203ENST00000409739 GSG1L2A8MUP6 293 aa37.4■■■■□ 3.58
TRAF3IP1-203ENST00000409739 BTBD19C9JJ37 291 aa37.4■■■■□ 3.58
TRAF3IP1-203ENST00000409739 ASNSP08243 561 aa37.4■■■■□ 3.58
TRAF3IP1-203ENST00000409739 SHMT1P34896 483 aa37.4■■■■□ 3.58
TRAF3IP1-203ENST00000409739 MOGSQ13724 837 aa37.4■■■■□ 3.58
TRAF3IP1-203ENST00000409739 USP17L12C9JPN9 530 aa37.39■■■■□ 3.58
TRAF3IP1-203ENST00000409739 USP17L21D6R901 530 aa37.39■■■■□ 3.58
TRAF3IP1-203ENST00000409739 ZBTB21Q9ULJ3 1066 aa37.39■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms