RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 MINDY4BA8MYZ0 360 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 NTF4P34130 210 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 FAM160A1Q05DH4 1040 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 RING1Q06587 406 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 PWP1Q13610 501 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 ARTNQ5T4W7 220 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 TMEM87AQ8NBN3 555 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 TMEM74Q96NL1 305 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 LRRC4CQ9HCJ2 640 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 SNCAIPQ9Y6H5 919 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 RBM47A0AV96 593 aaKnown RBP7.08□□□□□ -1.28
PMS1-203ENST00000409593 CYP26A1O43174 497 aa7.08□□□□□ -1.28
PMS1-203ENST00000409593 PF4P02776 101 aa7.08□□□□□ -1.28
PMS1-203ENST00000409593 HOXA10P31260 410 aaPredicted RBP7.08□□□□□ -1.28
PMS1-203ENST00000409593 CD97P48960 835 aa7.08□□□□□ -1.28
PMS1-203ENST00000409593 CAMK2GQ13555 558 aaPredicted RBP7.08□□□□□ -1.28
PMS1-203ENST00000409593 CPSF6Q16630 551 aaKnown RBP eCLIP7.08□□□□□ -1.28
PMS1-203ENST00000409593 TSNAXIP1Q2TAA8 658 aa7.08□□□□□ -1.28
PMS1-203ENST00000409593 CYFIP1Q7L576 1253 aa7.08□□□□□ -1.28
PMS1-203ENST00000409593 TOP6BLQ8N6T0 577 aa7.08□□□□□ -1.28
PMS1-203ENST00000409593 RSRP1Q9BUV0 290 aa7.08□□□□□ -1.28
PMS1-203ENST00000409593 KBTBD4Q9NVX7 518 aa7.08□□□□□ -1.28
PMS1-203ENST00000409593 HYAL3O43820 417 aaPredicted RBP7.07□□□□□ -1.28
PMS1-203ENST00000409593 BPNT1O95861 308 aa7.07□□□□□ -1.28
PMS1-203ENST00000409593 SNAP47Q5SQN1 464 aa7.07□□□□□ -1.28
PMS1-203ENST00000409593 INTS5Q6P9B9 1019 aaKnown RBP7.07□□□□□ -1.28
PMS1-203ENST00000409593 OGFOD3Q6PK18 319 aa7.07□□□□□ -1.28
PMS1-203ENST00000409593 BNC2Q6ZN30 1099 aaPredicted RBP7.07□□□□□ -1.28
PMS1-203ENST00000409593 HS2ST1Q7LGA3 356 aa7.07□□□□□ -1.28
PMS1-203ENST00000409593 KCT2Q8NC54 265 aa7.07□□□□□ -1.28
PMS1-203ENST00000409593 ZNF507Q8TCN5 953 aa7.07□□□□□ -1.28
PMS1-203ENST00000409593 COPRSQ9NQ92 184 aa7.07□□□□□ -1.28
PMS1-203ENST00000409593 GGT7Q9UJ14 662 aa7.07□□□□□ -1.28
PMS1-203ENST00000409593 CCDC9Q9Y3X0 531 aaKnown RBP7.07□□□□□ -1.28
PMS1-203ENST00000409593 MED26O95402 600 aa7.06□□□□□ -1.28
PMS1-203ENST00000409593 FOSL1P15407 271 aa7.06□□□□□ -1.28
PMS1-203ENST00000409593 GRK4P32298 578 aa7.06□□□□□ -1.28
PMS1-203ENST00000409593 RPL6Q02878 288 aaKnown RBP7.06□□□□□ -1.28
PMS1-203ENST00000409593 LMNB2Q03252 620 aa7.06□□□□□ -1.28
PMS1-203ENST00000409593 CYP27C1Q4G0S4 372 aa7.06□□□□□ -1.28
PMS1-203ENST00000409593 RHOVQ96L33 236 aa7.06□□□□□ -1.28
PMS1-203ENST00000409593 WNT10AQ9GZT5 417 aa7.06□□□□□ -1.28
PMS1-203ENST00000409593 LEFTY1O75610 366 aa7.06□□□□□ -1.28
PMS1-203ENST00000409593 FBRSQ9HAH7 460 aa7.06□□□□□ -1.28
PMS1-203ENST00000409593 F13A1P00488 732 aa7.05□□□□□ -1.28
PMS1-203ENST00000409593 ARMCX6Q7L4S7 300 aa7.05□□□□□ -1.28
PMS1-203ENST00000409593 ERMP1Q7Z2K6 904 aa7.05□□□□□ -1.28
PMS1-203ENST00000409593 NBPF11Q86T75 865 aa7.05□□□□□ -1.28
PMS1-203ENST00000409593 GOLM1Q8NBJ4 401 aa7.05□□□□□ -1.28
PMS1-203ENST00000409593 DUSP23Q9BVJ7 150 aa7.05□□□□□ -1.28
PMS1-203ENST00000409593 BACH2Q9BYV9 841 aa7.05□□□□□ -1.28
PMS1-203ENST00000409593 GFRA2O00451 464 aa7.04□□□□□ -1.28
PMS1-203ENST00000409593 PGRP06401 933 aa7.04□□□□□ -1.28
PMS1-203ENST00000409593 ARHGAP27Q6ZUM4 889 aa7.04□□□□□ -1.28
PMS1-203ENST00000409593 CCDC84Q86UT8 332 aaPredicted RBP7.04□□□□□ -1.28
PMS1-203ENST00000409593 GATAD2BQ8WXI9 593 aa7.04□□□□□ -1.28
PMS1-203ENST00000409593 PDE4BQ07343 736 aa7.03□□□□□ -1.28
PMS1-203ENST00000409593 NKG7Q16617 165 aa7.03□□□□□ -1.28
PMS1-203ENST00000409593 HID1Q8IV36 788 aa7.03□□□□□ -1.28
PMS1-203ENST00000409593 FAM181AQ8N9Y4 354 aa7.03□□□□□ -1.28
PMS1-203ENST00000409593 RGS22Q8NE09 1264 aa7.03□□□□□ -1.28
PMS1-203ENST00000409593 PRDM10Q9NQV6 1147 aa7.03□□□□□ -1.28
PMS1-203ENST00000409593 KIAA1324LA8MWY0 1029 aaPredicted RBP7.03□□□□□ -1.28
PMS1-203ENST00000409593 LRIG2O94898 1065 aa7.03□□□□□ -1.28
PMS1-203ENST00000409593 ZNF76P36508 570 aa7.03□□□□□ -1.28
PMS1-203ENST00000409593 XAGE3Q8WTP9 111 aa7.03□□□□□ -1.28
PMS1-203ENST00000409593 CILPO75339 1184 aa7.02□□□□□ -1.29
PMS1-203ENST00000409593 RECKO95980 971 aa7.02□□□□□ -1.29
PMS1-203ENST00000409593 SPINK2P20155 84 aa7.02□□□□□ -1.29
PMS1-203ENST00000409593 EIF4A3P38919 411 aaKnown RBP7.02□□□□□ -1.29
PMS1-203ENST00000409593 MSMPQ1L6U9 139 aa7.02□□□□□ -1.29
PMS1-203ENST00000409593 LDLRAD1Q5T700 205 aa7.02□□□□□ -1.29
PMS1-203ENST00000409593 MRRFQ96E11 262 aaKnown RBP7.02□□□□□ -1.29
PMS1-203ENST00000409593 MIPEPQ99797 713 aa7.02□□□□□ -1.29
PMS1-203ENST00000409593 DPH2Q9BQC3 489 aaPredicted RBP7.02□□□□□ -1.29
PMS1-203ENST00000409593 FOXQ1Q9C009 403 aa7.02□□□□□ -1.29
PMS1-203ENST00000409593 ZC3H7BQ9UGR2 993 aaKnown RBP7.02□□□□□ -1.29
PMS1-203ENST00000409593 CORINQ9Y5Q5 1042 aa7.02□□□□□ -1.29
PMS1-203ENST00000409593 FAM221AA4D161 298 aa7.01□□□□□ -1.29
PMS1-203ENST00000409593 TLR3O15455 904 aaKnown RBP7.01□□□□□ -1.29
PMS1-203ENST00000409593 SLBPQ14493 270 aaKnown RBP eCLIP7.01□□□□□ -1.29
PMS1-203ENST00000409593 PRAMEF13Q5VWM6 474 aa7.01□□□□□ -1.29
PMS1-203ENST00000409593 DTX1Q86Y01 620 aa7.01□□□□□ -1.29
PMS1-203ENST00000409593 FBXO27Q8NI29 283 aa7.01□□□□□ -1.29
PMS1-203ENST00000409593 ANGEL1Q9UNK9 670 aaKnown RBP7.01□□□□□ -1.29
PMS1-203ENST00000409593 SUPT16HQ9Y5B9 1047 aaKnown RBP7.01□□□□□ -1.29
PMS1-203ENST00000409593 TACC3Q9Y6A5 838 aa7.01□□□□□ -1.29
PMS1-203ENST00000409593 GRIN3BO60391 1043 aa7□□□□□ -1.29
PMS1-203ENST00000409593 PLCG1P19174 1290 aa7□□□□□ -1.29
PMS1-203ENST00000409593 ITIH2P19823 946 aa7□□□□□ -1.29
PMS1-203ENST00000409593 GARTP22102 1010 aa7□□□□□ -1.29
PMS1-203ENST00000409593 FBXL19Q6PCT2 694 aa7□□□□□ -1.29
PMS1-203ENST00000409593 FAM196AQ6ZSG2 479 aa7□□□□□ -1.29
PMS1-203ENST00000409593 FANCCQ00597 558 aa7□□□□□ -1.29
PMS1-203ENST00000409593 MPP2Q14168 576 aa7□□□□□ -1.29
PMS1-203ENST00000409593 TMEM87BQ96K49 555 aa7□□□□□ -1.29
PMS1-203ENST00000409593 TJP2Q9UDY2 1190 aa7□□□□□ -1.29
PMS1-203ENST00000409593 TPX2Q9ULW0 747 aaKnown RBP7□□□□□ -1.29
PMS1-203ENST00000409593 U3KQE9 123 aa7□□□□□ -1.29
PMS1-203ENST00000409593 SLITRK5O94991 958 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms