RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 DCAF15Q66K64 600 aa28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 SNX29Q8TEQ0 813 aa28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 KCNH3Q9ULD8 1083 aa28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 CNGA4Q8IV77 575 aa28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 DNM3Q9UQ16 869 aa28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 INSRP06213 1382 aa28.08■■■□□ 2.09
SPIRE1-202ENST00000409402 YEATS2Q9ULM3 1422 aa28.07■■■□□ 2.08
SPIRE1-202ENST00000409402 VWA3BQ502W6 1294 aa28.07■■■□□ 2.08
SPIRE1-202ENST00000409402 DSCC1Q9BVC3 393 aa28.07■■■□□ 2.08
SPIRE1-202ENST00000409402 PLEKHG1Q9ULL1 1385 aa28.07■■■□□ 2.08
SPIRE1-202ENST00000409402 GUCA1BQ9UMX6 200 aa28.07■■■□□ 2.08
SPIRE1-202ENST00000409402 MYL10Q9BUA6 226 aa28.07■■■□□ 2.08
SPIRE1-202ENST00000409402 ARID4AP29374 1257 aaPredicted RBP28.07■■■□□ 2.08
SPIRE1-202ENST00000409402 STMN4Q9H169 189 aaPredicted RBP28.06■■■□□ 2.08
SPIRE1-202ENST00000409402 LOC102724428A0A0B4J2F2 783 aa28.06■■■□□ 2.08
SPIRE1-202ENST00000409402 SIK1P57059 783 aa28.06■■■□□ 2.08
SPIRE1-202ENST00000409402 ZNF830Q96NB3 372 aaPredicted RBP28.06■■■□□ 2.08
SPIRE1-202ENST00000409402 CUTAO60888 179 aa28.06■■■□□ 2.08
SPIRE1-202ENST00000409402 PCCAP05165 728 aaPredicted RBP28.06■■■□□ 2.08
SPIRE1-202ENST00000409402 CALCRLQ16602 461 aa28.06■■■□□ 2.08
SPIRE1-202ENST00000409402 PPM1EQ8WY54 764 aa28.06■■■□□ 2.08
SPIRE1-202ENST00000409402 TSGA10Q9BZW7 698 aa28.06■■■□□ 2.08
SPIRE1-202ENST00000409402 GOLGA1Q92805 767 aa28.06■■■□□ 2.08
SPIRE1-202ENST00000409402 FAM47AQ5JRC9 791 aa28.05■■■□□ 2.08
SPIRE1-202ENST00000409402 IL17REQ8NFR9 667 aa28.05■■■□□ 2.08
SPIRE1-202ENST00000409402 KIF24Q5T7B8 1368 aa28.05■■■□□ 2.08
SPIRE1-202ENST00000409402 CETN3O15182 167 aa28.05■■■□□ 2.08
SPIRE1-202ENST00000409402 BMS1Q14692 1282 aaKnown RBP28.05■■■□□ 2.08
SPIRE1-202ENST00000409402 PRIMPOLQ96LW4 560 aa28.05■■■□□ 2.08
SPIRE1-202ENST00000409402 USPL1Q5W0Q7 1092 aa28.05■■■□□ 2.08
SPIRE1-202ENST00000409402 TTLL7Q6ZT98 887 aa28.05■■■□□ 2.08
SPIRE1-202ENST00000409402 MTUS1Q9ULD2 1270 aa28.05■■■□□ 2.08
SPIRE1-202ENST00000409402 EFCAB6Q5THR3 1501 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 ZMYM4Q5VZL5 1548 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 KCNQ3O43525 872 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 NLRX1Q86UT6 975 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 KIAA1524Q8TCG1 905 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 MLH3Q9UHC1 1453 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 SNX16P57768 344 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 FAM196AQ6ZSG2 479 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 CARD10Q9BWT7 1032 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 SPC25Q9HBM1 224 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 MAP3K15Q6ZN16 1313 aa28.04■■■□□ 2.08
SPIRE1-202ENST00000409402 TNFAIP3P21580 790 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 CCDC14Q49A88 953 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 C6orf163Q5TEZ5 329 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 FNBP4Q8N3X1 1017 aaPredicted RBP28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 FAM107BQ9H098 131 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 SAMD9Q5K651 1589 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 NDC80O14777 642 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 ATP2A2P16615 1042 aaKnown RBP28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 MAEAQ7L5Y9 396 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 RNF34Q969K3 372 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 DCPSQ96C86 337 aaKnown RBP28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 TXNDC16Q9P2K2 825 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 TBC1D8BQ0IIM8 1120 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 SRRTQ9BXP5 876 aaKnown RBP28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 SEL1L2Q5TEA6 688 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 RXRBP28702 533 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 GYG1P46976 350 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 CBX1P83916 185 aa28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 PAIP2Q9BPZ3 127 aaKnown RBP28.03■■■□□ 2.08
SPIRE1-202ENST00000409402 DOK7Q18PE1 504 aa28.02■■■□□ 2.08
SPIRE1-202ENST00000409402 REXO1Q8N1G1 1221 aaKnown RBP28.02■■■□□ 2.08
SPIRE1-202ENST00000409402 PABPC4Q13310 644 aaKnown RBP eCLIP28.02■■■□□ 2.08
SPIRE1-202ENST00000409402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.02■■■□□ 2.084e-6■□□□□ 9.9
SPIRE1-202ENST00000409402 FAM135BQ49AJ0 1406 aa28.02■■■□□ 2.08
SPIRE1-202ENST00000409402 CRKLP46109 303 aaKnown RBP28.02■■■□□ 2.08
SPIRE1-202ENST00000409402 PHKBQ93100 1093 aa28.02■■■□□ 2.08
SPIRE1-202ENST00000409402 NOX5Q96PH1 765 aa28.02■■■□□ 2.08
SPIRE1-202ENST00000409402 KIF22Q14807 665 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 CCDC63Q8NA47 563 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 GAS8O95995 478 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 PPP1R7Q15435 360 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 MYCT1Q8N699 235 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 TCP10L2B9ZVM9 353 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 PAGR1Q9BTK6 254 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 FAM169AQ9Y6X4 670 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 USP17L12C9JPN9 530 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 USP17L21D6R901 530 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 NOLC1Q14978 699 aaKnown RBP eCLIP28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 GNPTABQ3T906 1256 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 KCNG1Q9UIX4 513 aa28.01■■■□□ 2.07
SPIRE1-202ENST00000409402 E7EWF7 191 aa28■■■□□ 2.07
SPIRE1-202ENST00000409402 RRP9O43818 475 aaKnown RBP28■■■□□ 2.07
SPIRE1-202ENST00000409402 LIN9Q5TKA1 542 aa28■■■□□ 2.07
SPIRE1-202ENST00000409402 AKR1B15C9JRZ8 316 aaPredicted RBP28■■■□□ 2.07
SPIRE1-202ENST00000409402 POLR2DO15514 142 aaKnown RBP28■■■□□ 2.07
SPIRE1-202ENST00000409402 TRIM14Q14142 442 aa28■■■□□ 2.07
SPIRE1-202ENST00000409402 KRT40Q6A162 431 aa28■■■□□ 2.07
SPIRE1-202ENST00000409402 CSGALNACT2Q8N6G5 542 aa28■■■□□ 2.07
SPIRE1-202ENST00000409402 CEP63Q96MT8 703 aa28■■■□□ 2.07
SPIRE1-202ENST00000409402 LZTFL1Q9NQ48 299 aa28■■■□□ 2.07
SPIRE1-202ENST00000409402 HERC4Q5GLZ8 1057 aaPredicted RBP28■■■□□ 2.07
SPIRE1-202ENST00000409402 KIAA0825Q8IV33 1275 aa28■■■□□ 2.07
SPIRE1-202ENST00000409402 SULF1Q8IWU6 871 aa28■■■□□ 2.07
SPIRE1-202ENST00000409402 CAPZA3Q96KX2 299 aa28■■■□□ 2.07
SPIRE1-202ENST00000409402 NSRP1Q9H0G5 558 aaKnown RBP28■■■□□ 2.07
SPIRE1-202ENST00000409402 LEO1Q8WVC0 666 aaPredicted RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms