RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 EXOSC10Q01780 885 aaKnown RBP19.91■□□□□ 0.78
SSB-202ENST00000409333 NOL8Q76FK4 1167 aaKnown RBP19.91■□□□□ 0.78
SSB-202ENST00000409333 IPO9Q96P70 1041 aaKnown RBP19.91■□□□□ 0.78
SSB-202ENST00000409333 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.91■□□□□ 0.78
SSB-202ENST00000409333 ASTN2O75129 1339 aaPredicted RBP19.91■□□□□ 0.78
SSB-202ENST00000409333 SLC3A2P08195 630 aaKnown RBP19.9■□□□□ 0.78
SSB-202ENST00000409333 ANTXR2P58335 489 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 CYB5R4Q7L1T6 521 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 SH3BP5LQ7L8J4 393 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 HSCBQ8IWL3 235 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 TRPM4Q8TD43 1214 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 CNNM2Q9H8M5 875 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 CNTNAP1P78357 1384 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 COL2A1P02458 1487 aaPredicted RBP19.9■□□□□ 0.78
SSB-202ENST00000409333 DDTLA6NHG4 134 aaPredicted RBP19.9■□□□□ 0.78
SSB-202ENST00000409333 KDM4AO75164 1064 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 ENTPD3O75355 529 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 SLC4A3P48751 1232 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 SLC44A5Q8NCS7 719 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 KRT23Q9C075 422 aa19.9■□□□□ 0.78
SSB-202ENST00000409333 WDR90Q96KV7 1748 aa19.89■□□□□ 0.78
SSB-202ENST00000409333 MCM5P33992 734 aa19.89■□□□□ 0.77
SSB-202ENST00000409333 BECN1Q14457 450 aa19.89■□□□□ 0.77
SSB-202ENST00000409333 DPY19L2Q6NUT2 758 aa19.89■□□□□ 0.77
SSB-202ENST00000409333 Q6ZUG5 572 aa19.89■□□□□ 0.77
SSB-202ENST00000409333 LARP6Q9BRS8 491 aaKnown RBP19.89■□□□□ 0.77
SSB-202ENST00000409333 PRC1O43663 620 aa19.88■□□□□ 0.77
SSB-202ENST00000409333 PCP11498 1178 aaKnown RBP19.88■□□□□ 0.77
SSB-202ENST00000409333 LMOD1P29536 600 aaPredicted RBP19.88■□□□□ 0.77
SSB-202ENST00000409333 PDE4BQ07343 736 aa19.88■□□□□ 0.77
SSB-202ENST00000409333 TOB2Q14106 344 aaPredicted RBP19.88■□□□□ 0.77
SSB-202ENST00000409333 C16orf86Q6ZW13 317 aa19.88■□□□□ 0.77
SSB-202ENST00000409333 TTC6Q86TZ1 520 aa19.88■□□□□ 0.77
SSB-202ENST00000409333 ZSWIM5Q9P217 1185 aa19.88■□□□□ 0.77
SSB-202ENST00000409333 SCAF8Q9UPN6 1271 aaKnown RBP19.88■□□□□ 0.77
SSB-202ENST00000409333 ATRNL1Q5VV63 1379 aa19.88■□□□□ 0.77
SSB-202ENST00000409333 GREB1LQ9C091 1923 aaPredicted RBP19.88■□□□□ 0.77
SSB-202ENST00000409333 K7ELQ4 463 aaPredicted RBP19.88■□□□□ 0.77
SSB-202ENST00000409333 ORC4O43929 436 aa19.88■□□□□ 0.77
SSB-202ENST00000409333 FKBP1CQ5VVH2 108 aa19.88■□□□□ 0.77
SSB-202ENST00000409333 ZSCAN29Q8IWY8 852 aaPredicted RBP19.88■□□□□ 0.77
SSB-202ENST00000409333 IL27Q8NEV9 243 aa19.88■□□□□ 0.77
SSB-202ENST00000409333 DHX36Q9H2U1 1008 aaKnown RBP19.88■□□□□ 0.77
SSB-202ENST00000409333 HACL1Q9UJ83 578 aa19.88■□□□□ 0.77
SSB-202ENST00000409333 GLTPD2A6NH11 291 aa19.87■□□□□ 0.77
SSB-202ENST00000409333 RANBP6O60518 1105 aaKnown RBP19.87■□□□□ 0.77
SSB-202ENST00000409333 HLA-DOAP06340 250 aa19.87■□□□□ 0.77
SSB-202ENST00000409333 SLURP2P0DP57 97 aa19.87■□□□□ 0.77
SSB-202ENST00000409333 CDK8P49336 464 aa19.87■□□□□ 0.77
SSB-202ENST00000409333 ESR2Q92731 530 aa19.87■□□□□ 0.77
SSB-202ENST00000409333 L3MBTL3Q96JM7 780 aaPredicted RBP19.87■□□□□ 0.77
SSB-202ENST00000409333 ALDH8A1Q9H2A2 487 aaPredicted RBP19.87■□□□□ 0.77
SSB-202ENST00000409333 GPHNQ9NQX3 736 aaPredicted RBP19.87■□□□□ 0.77
SSB-202ENST00000409333 ATAD5Q96QE3 1844 aa19.86■□□□□ 0.77
SSB-202ENST00000409333 HIRAP54198 1017 aaPredicted RBP19.86■□□□□ 0.77
SSB-202ENST00000409333 GABPAQ06546 454 aa19.86■□□□□ 0.77
SSB-202ENST00000409333 FAM151AQ8WW52 585 aa19.86■□□□□ 0.77
SSB-202ENST00000409333 SERPINB13Q9UIV8 391 aa19.86■□□□□ 0.77
SSB-202ENST00000409333 WDR19Q8NEZ3 1342 aa19.86■□□□□ 0.77
SSB-202ENST00000409333 FGD1P98174 961 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 FAM47AQ5JRC9 791 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 FAM83AQ86UY5 434 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 CDAN1Q8IWY9 1227 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 ZKSCAN3Q9BRR0 538 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 AGXT2Q9BYV1 514 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 TMEM39BQ9GZU3 492 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 MKNK2Q9HBH9 465 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 MYH4Q9Y623 1939 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 MCM2P49736 904 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 BRF1Q92994 677 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 EHD4Q9H223 541 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 DNAJC18Q9H819 358 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 ADARB2Q9NS39 739 aaKnown RBP19.85■□□□□ 0.77
SSB-202ENST00000409333 PI4KBQ9UBF8 816 aa19.85■□□□□ 0.77
SSB-202ENST00000409333 FAM196BA6NMK8 535 aa19.84■□□□□ 0.77
SSB-202ENST00000409333 LARGE1O95461 756 aa19.84■□□□□ 0.77
SSB-202ENST00000409333 RASA1P20936 1047 aa19.84■□□□□ 0.77
SSB-202ENST00000409333 ANGEL2Q5VTE6 544 aaKnown RBP19.84■□□□□ 0.77
SSB-202ENST00000409333 CSRNP1Q96S65 589 aa19.84■□□□□ 0.77
SSB-202ENST00000409333 TPCN1Q9ULQ1 816 aa19.84■□□□□ 0.77
SSB-202ENST00000409333 ANKRD1Q15327 319 aa19.83■□□□□ 0.77
SSB-202ENST00000409333 TMX3Q96JJ7 454 aa19.83■□□□□ 0.77
SSB-202ENST00000409333 LIMCH1Q9UPQ0 1083 aa19.83■□□□□ 0.77
SSB-202ENST00000409333 SH2B2O14492 632 aaPredicted RBP19.83■□□□□ 0.76
SSB-202ENST00000409333 SHMT1P34896 483 aa19.83■□□□□ 0.76
SSB-202ENST00000409333 TNNI2P48788 182 aa19.83■□□□□ 0.76
SSB-202ENST00000409333 APOBRQ0VD83 1088 aa19.83■□□□□ 0.76
SSB-202ENST00000409333 TNFAIP1Q13829 316 aa19.83■□□□□ 0.76
SSB-202ENST00000409333 RASA3Q14644 834 aa19.83■□□□□ 0.76
SSB-202ENST00000409333 FBXL16Q8N461 479 aa19.83■□□□□ 0.76
SSB-202ENST00000409333 CRACR2BQ8N4Y2 399 aaPredicted RBP19.83■□□□□ 0.76
SSB-202ENST00000409333 ZNF287Q9HBT7 754 aa19.83■□□□□ 0.76
SSB-202ENST00000409333 SENP2Q9HC62 589 aa19.83■□□□□ 0.76
SSB-202ENST00000409333 GGA3Q9NZ52 723 aa19.83■□□□□ 0.76
SSB-202ENST00000409333 PGAP2Q9UHJ9 254 aa19.83■□□□□ 0.76
SSB-202ENST00000409333 TSPY2A6NKD2 308 aa19.82■□□□□ 0.76
SSB-202ENST00000409333 IGDCC4Q8TDY8 1250 aa19.82■□□□□ 0.76
SSB-202ENST00000409333 TMEM87BQ96K49 555 aa19.82■□□□□ 0.76
SSB-202ENST00000409333 SWAP70Q9UH65 585 aa19.82■□□□□ 0.76
SSB-202ENST00000409333 ANGEL1Q9UNK9 670 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms