RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 PSMD6Q15008 389 aa13.46□□□□□ -0.25
SHANK2-203ENST00000409161 RPS6KA2Q15349 733 aa13.46□□□□□ -0.25
SHANK2-203ENST00000409161 PFDN1O60925 122 aa13.46□□□□□ -0.25
SHANK2-203ENST00000409161 YWHAEP62258 255 aaKnown RBP13.46□□□□□ -0.25
SHANK2-203ENST00000409161 RPS6KA1Q15418 735 aa13.46□□□□□ -0.25
SHANK2-203ENST00000409161 CUTAO60888 179 aa13.46□□□□□ -0.25
SHANK2-203ENST00000409161 CYP7A1P22680 504 aa13.46□□□□□ -0.25
SHANK2-203ENST00000409161 PEX26Q7Z412 305 aa13.46□□□□□ -0.25
SHANK2-203ENST00000409161 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
SHANK2-203ENST00000409161 BAG5Q9UL15 447 aa13.46□□□□□ -0.26
SHANK2-203ENST00000409161 LZTS2Q9BRK4 669 aa13.46□□□□□ -0.26
SHANK2-203ENST00000409161 SAR1BQ9Y6B6 198 aa13.46□□□□□ -0.26
SHANK2-203ENST00000409161 TBC1D8O95759 1140 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 ESRRGP62508 458 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 PPP1R21Q6ZMI0 780 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 DAPK3O43293 454 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 OGFOD1Q8N543 542 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 BAIAP2L1Q9UHR4 511 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 CREB3L3Q68CJ9 461 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 ANKRD13DQ6ZTN6 518 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 IFIH1Q9BYX4 1025 aaKnown RBP13.45□□□□□ -0.26
SHANK2-203ENST00000409161 ABCC5O15440 1437 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 MBIPQ9NS73 344 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 NUP160Q12769 1436 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 PI4KAP2A4QPH2 592 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 DEXIO95424 95 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 PI4KAP1Q8N8J0 262 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 ZNF526Q8TF50 670 aaPredicted RBP13.45□□□□□ -0.26
SHANK2-203ENST00000409161 TEKT1Q969V4 418 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 DDX21Q9NR30 783 aaKnown RBP eCLIP13.45□□□□□ -0.26
SHANK2-203ENST00000409161 DDX41Q9UJV9 622 aaKnown RBP13.45□□□□□ -0.26
SHANK2-203ENST00000409161 PTPDC1A2A3K4 754 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 PFDN6O15212 129 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 CCDC105Q8IYK2 499 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 THUMPD2Q9BTF0 503 aaKnown RBP13.45□□□□□ -0.26
SHANK2-203ENST00000409161 XAB2Q9HCS7 855 aaKnown RBP13.45□□□□□ -0.26
SHANK2-203ENST00000409161 TTC16Q8NEE8 873 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 CAPN7Q9Y6W3 813 aa13.45□□□□□ -0.26
SHANK2-203ENST00000409161 NUTM2BA6NNL0 878 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-203ENST00000409161 NUTM2EB1AL46 878 aaPredicted RBP13.44□□□□□ -0.26
SHANK2-203ENST00000409161 AK2P54819 239 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 NYXQ9GZU5 481 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 NOC2LQ9Y3T9 749 aaKnown RBP13.44□□□□□ -0.26
SHANK2-203ENST00000409161 RIPOR2Q9Y4F9 1068 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 EFCAB8A8MWE9 144 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 EIF3CLB5ME19 914 aaKnown RBP13.44□□□□□ -0.26
SHANK2-203ENST00000409161 CCDC93Q567U6 631 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 KRT12Q99456 494 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 EIF3CQ99613 913 aaKnown RBP13.44□□□□□ -0.26
SHANK2-203ENST00000409161 KCNH3Q9ULD8 1083 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 SMIM24O75264 130 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 DPH6Q7L8W6 267 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 EFCAB13Q8IY85 973 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 CLSTN2Q9H4D0 955 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 MAN1A1P33908 653 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 HELLSQ9NRZ9 838 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
SHANK2-203ENST00000409161 P4HA1P13674 534 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 CTNNA1P35221 906 aaKnown RBP13.44□□□□□ -0.26
SHANK2-203ENST00000409161 ANKRD20A4Q4UJ75 823 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 ANKRD20A8PQ5CZ79 823 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 ANKRD20A2Q5SQ80 823 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 ANKRD20A1Q5TYW2 823 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 ZC4H2Q9NQZ6 224 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.44□□□□□ -0.26
SHANK2-203ENST00000409161 MRC2Q9UBG0 1479 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 CAPS2Q9BXY5 557 aa13.44□□□□□ -0.26
SHANK2-203ENST00000409161 VWA3AA6NCI4 1184 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 U2AF2P26368 475 aaKnown RBP eCLIP13.43□□□□□ -0.266e-6■■■□□ 19.1
SHANK2-203ENST00000409161 BIRC3Q13489 604 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 CSGALNACT2Q8N6G5 542 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 TMEM87BQ96K49 555 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 ZNF277Q9NRM2 450 aaPredicted RBP13.43□□□□□ -0.26
SHANK2-203ENST00000409161 SFMBT2Q5VUG0 894 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 BBOF1Q8ND07 529 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 RIC8AQ9NPQ8 531 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 RNF113AO15541 343 aaKnown RBP13.43□□□□□ -0.26
SHANK2-203ENST00000409161 HOXA7P31268 230 aaPredicted RBP13.43□□□□□ -0.26
SHANK2-203ENST00000409161 IFNL2Q8IZJ0 200 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 MIS12Q9H081 205 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 GOLGA8CPA6NN73 597 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 FANCCQ00597 558 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 PLCB4Q15147 1175 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 SPZ1Q9BXG8 430 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 WWC3Q9ULE0 1092 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 ZMYM4Q5VZL5 1548 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
SHANK2-203ENST00000409161 TRIM68Q6AZZ1 485 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 BANK1Q8NDB2 785 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 NLRP7Q8WX94 980 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 AFG3L2Q9Y4W6 797 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 DCUN1D2Q6PH85 259 aa13.43□□□□□ -0.26
SHANK2-203ENST00000409161 SUN1O94901 812 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 NLRP12P59046 1061 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 PHEXP78562 749 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 STRN3Q13033 797 aa13.42□□□□□ -0.26
SHANK2-203ENST00000409161 CDK13Q14004 1512 aaKnown RBP13.42□□□□□ -0.26
SHANK2-203ENST00000409161 SLC9C2Q5TAH2 1124 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms