RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.55□□□□□ -0.4
FAM49A-202ENST00000406434 FAM196BA6NMK8 535 aa12.55□□□□□ -0.4
FAM49A-202ENST00000406434 IGF2BP3O00425 579 aaKnown RBP eCLIP12.55□□□□□ -0.4
FAM49A-202ENST00000406434 IRF6O14896 467 aa12.55□□□□□ -0.4
FAM49A-202ENST00000406434 IGSF3O75054 1194 aa12.55□□□□□ -0.4
FAM49A-202ENST00000406434 USP5P45974 858 aa12.55□□□□□ -0.4
FAM49A-202ENST00000406434 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
FAM49A-202ENST00000406434 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
FAM49A-202ENST00000406434 PTPN18Q99952 460 aa12.55□□□□□ -0.4
FAM49A-202ENST00000406434 PICK1Q9NRD5 415 aa12.55□□□□□ -0.4
FAM49A-202ENST00000406434 PAG1Q9NWQ8 432 aa12.55□□□□□ -0.4
FAM49A-202ENST00000406434 SAP30BPQ9UHR5 308 aaKnown RBP12.55□□□□□ -0.4
FAM49A-202ENST00000406434 MAGEB6P1A0A0J9YX57 407 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 PHF20L1A8MW92 1017 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 GPR25O00155 361 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 STK25O00506 426 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 PDE6AP16499 860 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 PPATQ06203 517 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 PPIL2Q13356 520 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 DGKZQ13574 1117 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 SLC4A8Q2Y0W8 1093 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 BRI3BPQ8WY22 251 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 GPATCH3Q96I76 525 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 HAUS7Q99871 368 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 TRIM34Q9BYJ4 488 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 ECHDC1Q9NTX5 307 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 PI4KBQ9UBF8 816 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 RFX7Q2KHR2 1363 aa12.54□□□□□ -0.4
FAM49A-202ENST00000406434 ZNF532Q9HCE3 1301 aa12.53□□□□□ -0.4
FAM49A-202ENST00000406434 TESPA1A2RU30 521 aaPredicted RBP12.53□□□□□ -0.4
FAM49A-202ENST00000406434 CTNND1O60716 968 aaKnown RBP12.53□□□□□ -0.4
FAM49A-202ENST00000406434 CETPP11597 493 aa12.53□□□□□ -0.4
FAM49A-202ENST00000406434 MAP3K10Q02779 954 aa12.53□□□□□ -0.4
FAM49A-202ENST00000406434 SNAPC2Q13487 334 aa12.53□□□□□ -0.4
FAM49A-202ENST00000406434 ANKRD45Q5TZF3 282 aa12.53□□□□□ -0.4
FAM49A-202ENST00000406434 TSHZ3Q63HK5 1081 aa12.53□□□□□ -0.4
FAM49A-202ENST00000406434 ZNF296Q8WUU4 475 aaPredicted RBP12.53□□□□□ -0.4
FAM49A-202ENST00000406434 PALD1Q9ULE6 856 aa12.53□□□□□ -0.4
FAM49A-202ENST00000406434 ZHX2Q9Y6X8 837 aa12.53□□□□□ -0.4
FAM49A-202ENST00000406434 FLT1P17948 1338 aa12.52□□□□□ -0.41
FAM49A-202ENST00000406434 TBC1D12O60347 775 aa12.52□□□□□ -0.41
FAM49A-202ENST00000406434 FKTNO75072 461 aa12.52□□□□□ -0.41
FAM49A-202ENST00000406434 SLFNL1Q499Z3 407 aa12.52□□□□□ -0.41
FAM49A-202ENST00000406434 NOL9Q5SY16 702 aaKnown RBP12.52□□□□□ -0.41
FAM49A-202ENST00000406434 SCYL3Q8IZE3 742 aa12.52□□□□□ -0.41
FAM49A-202ENST00000406434 CRACR2BQ8N4Y2 399 aaPredicted RBP12.52□□□□□ -0.41
FAM49A-202ENST00000406434 EXOC6Q8TAG9 804 aa12.52□□□□□ -0.41
FAM49A-202ENST00000406434 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.52□□□□□ -0.41
FAM49A-202ENST00000406434 MCOLN1Q9GZU1 580 aa12.52□□□□□ -0.41
FAM49A-202ENST00000406434 DHX36Q9H2U1 1008 aaKnown RBP12.52□□□□□ -0.41
FAM49A-202ENST00000406434 DOCK2Q92608 1830 aa12.52□□□□□ -0.41
FAM49A-202ENST00000406434 ATRNL1Q5VV63 1379 aa12.51□□□□□ -0.41
FAM49A-202ENST00000406434 BTBD19C9JJ37 291 aa12.51□□□□□ -0.41
FAM49A-202ENST00000406434 HLA-DOAP06340 250 aa12.51□□□□□ -0.41
FAM49A-202ENST00000406434 PTPRAP18433 802 aa12.51□□□□□ -0.41
FAM49A-202ENST00000406434 CRHR2Q13324 411 aa12.51□□□□□ -0.41
FAM49A-202ENST00000406434 TAF1CQ15572 869 aaPredicted RBP12.51□□□□□ -0.41
FAM49A-202ENST00000406434 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
FAM49A-202ENST00000406434 CCDC84Q86UT8 332 aaPredicted RBP12.51□□□□□ -0.41
FAM49A-202ENST00000406434 CERS3Q8IU89 383 aa12.51□□□□□ -0.41
FAM49A-202ENST00000406434 FOXP4Q8IVH2 680 aaPredicted RBP12.51□□□□□ -0.41
FAM49A-202ENST00000406434 FAM43AQ8N2R8 423 aa12.51□□□□□ -0.41
FAM49A-202ENST00000406434 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.51□□□□□ -0.41
FAM49A-202ENST00000406434 MAST2Q6P0Q8 1798 aa12.51□□□□□ -0.41
FAM49A-202ENST00000406434 CXCL11O14625 94 aa12.5□□□□□ -0.41
FAM49A-202ENST00000406434 CHGBP05060 677 aa12.5□□□□□ -0.41
FAM49A-202ENST00000406434 POLR3DP05423 398 aaPredicted RBP12.5□□□□□ -0.41
FAM49A-202ENST00000406434 IRX6P78412 446 aaPredicted RBP12.5□□□□□ -0.41
FAM49A-202ENST00000406434 CTU1Q7Z7A3 348 aaKnown RBP12.5□□□□□ -0.41
FAM49A-202ENST00000406434 ABHD8Q96I13 439 aa12.5□□□□□ -0.41
FAM49A-202ENST00000406434 CRNKL1Q9BZJ0 848 aaKnown RBP12.5□□□□□ -0.41
FAM49A-202ENST00000406434 RWDD1Q9H446 243 aaPredicted RBP12.5□□□□□ -0.41
FAM49A-202ENST00000406434 ZFYVE28Q9HCC9 887 aa12.5□□□□□ -0.41
FAM49A-202ENST00000406434 TSHZ2Q9NRE2 1034 aa12.5□□□□□ -0.41
FAM49A-202ENST00000406434 HERC5Q9UII4 1024 aaKnown RBP12.5□□□□□ -0.41
FAM49A-202ENST00000406434 CDK5RAP2Q96SN8 1893 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 TCRBV5S4A2TA0A5A2 114 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 TRIM75PA6NK02 468 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 CCDC85CA6NKD9 419 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 ADD2P35612 726 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 HDAC1Q13547 482 aaPredicted RBP12.49□□□□□ -0.41
FAM49A-202ENST00000406434 AAMPQ13685 434 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 RRP1BQ14684 758 aaKnown RBP12.49□□□□□ -0.41
FAM49A-202ENST00000406434 ZSCAN25Q6NSZ9 544 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 GADL1Q6ZQY3 521 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 OTUD7AQ8TE49 926 aaPredicted RBP12.49□□□□□ -0.41
FAM49A-202ENST00000406434 GCC1Q96CN9 775 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 RIOK1Q9BRS2 568 aaKnown RBP12.49□□□□□ -0.41
FAM49A-202ENST00000406434 CFHR5Q9BXR6 569 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 ARMT1Q9H993 441 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 KCNH4Q9UQ05 1017 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 AFG3L2Q9Y4W6 797 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 MYH1P12882 1939 aa12.49□□□□□ -0.41
FAM49A-202ENST00000406434 CAP2P40123 477 aa12.48□□□□□ -0.41
FAM49A-202ENST00000406434 B4GALNT3Q6L9W6 998 aa12.48□□□□□ -0.41
FAM49A-202ENST00000406434 TTC6Q86TZ1 520 aa12.48□□□□□ -0.41
FAM49A-202ENST00000406434 LCORLQ8N3X6 602 aa12.48□□□□□ -0.41
FAM49A-202ENST00000406434 SDR42E1Q8WUS8 393 aa12.48□□□□□ -0.41
FAM49A-202ENST00000406434 COL2A1P02458 1487 aaPredicted RBP12.47□□□□□ -0.41
FAM49A-202ENST00000406434 PDHXO00330 501 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms