RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 SMC3Q9UQE7 1217 aa19.88■□□□□ 0.77
IRF1-202ENST00000405885 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.88■□□□□ 0.77
IRF1-202ENST00000405885 WDR19Q8NEZ3 1342 aa19.87■□□□□ 0.77
IRF1-202ENST00000405885 NMT2O60551 498 aa19.87■□□□□ 0.77
IRF1-202ENST00000405885 PFKFB2O60825 505 aa19.87■□□□□ 0.77
IRF1-202ENST00000405885 VIL1P09327 827 aaKnown RBP19.87■□□□□ 0.77
IRF1-202ENST00000405885 NFKBIBQ15653 356 aa19.87■□□□□ 0.77
IRF1-202ENST00000405885 EVCP57679 992 aa19.87■□□□□ 0.77
IRF1-202ENST00000405885 CERS3Q8IU89 383 aa19.87■□□□□ 0.77
IRF1-202ENST00000405885 ZFPM1Q8IX07 1006 aa19.87■□□□□ 0.77
IRF1-202ENST00000405885 ESR2Q92731 530 aa19.87■□□□□ 0.77
IRF1-202ENST00000405885 GOLGA8BA8MQT2 603 aa19.86■□□□□ 0.77
IRF1-202ENST00000405885 CTDNEP1O95476 244 aa19.86■□□□□ 0.77
IRF1-202ENST00000405885 SLURP2P0DP57 97 aa19.86■□□□□ 0.77
IRF1-202ENST00000405885 CHAMP1Q96JM3 812 aa19.86■□□□□ 0.77
IRF1-202ENST00000405885 VPS33BQ9H267 617 aa19.86■□□□□ 0.77
IRF1-202ENST00000405885 SERPINA10Q9UK55 444 aa19.86■□□□□ 0.77
IRF1-202ENST00000405885 DDX60LQ5H9U9 1706 aaKnown RBP19.86■□□□□ 0.77
IRF1-202ENST00000405885 SHTN1A0MZ66 631 aa19.85■□□□□ 0.77
IRF1-202ENST00000405885 CFAP100Q494V2 611 aa19.85■□□□□ 0.77
IRF1-202ENST00000405885 CCDC144CPQ8IYA2 1237 aa19.85■□□□□ 0.77
IRF1-202ENST00000405885 JDP2Q8WYK2 163 aa19.85■□□□□ 0.77
IRF1-202ENST00000405885 ZNF274Q96GC6 653 aaPredicted RBP19.85■□□□□ 0.77
IRF1-202ENST00000405885 TMEM87BQ96K49 555 aa19.85■□□□□ 0.77
IRF1-202ENST00000405885 PRMT6Q96LA8 375 aaPredicted RBP19.85■□□□□ 0.77
IRF1-202ENST00000405885 GMLQ99445 158 aa19.85■□□□□ 0.77
IRF1-202ENST00000405885 PSME4Q14997 1843 aa19.85■□□□□ 0.77
IRF1-202ENST00000405885 TCP10Q12799 353 aa19.85■□□□□ 0.77
IRF1-202ENST00000405885 DDX11Q96FC9 970 aa19.85■□□□□ 0.77
IRF1-202ENST00000405885 TNKSO95271 1327 aa19.84■□□□□ 0.77
IRF1-202ENST00000405885 NFXL1Q6ZNB6 911 aa19.84■□□□□ 0.77
IRF1-202ENST00000405885 MICU3Q86XE3 530 aa19.84■□□□□ 0.77
IRF1-202ENST00000405885 TDRD3Q9H7E2 651 aaKnown RBP19.84■□□□□ 0.77
IRF1-202ENST00000405885 PDE4BQ07343 736 aa19.83■□□□□ 0.77
IRF1-202ENST00000405885 UBAC1Q9BSL1 405 aa19.83■□□□□ 0.77
IRF1-202ENST00000405885 MRIQ9BWK5 157 aa19.83■□□□□ 0.77
IRF1-202ENST00000405885 FOCADQ5VW36 1801 aa19.83■□□□□ 0.77
IRF1-202ENST00000405885 ORC4O43929 436 aa19.83■□□□□ 0.76
IRF1-202ENST00000405885 SLC3A2P08195 630 aaKnown RBP19.83■□□□□ 0.76
IRF1-202ENST00000405885 SYT1P21579 422 aa19.83■□□□□ 0.76
IRF1-202ENST00000405885 HDLBPQ00341 1268 aaKnown RBP19.83■□□□□ 0.76
IRF1-202ENST00000405885 APOA5Q6Q788 366 aa19.83■□□□□ 0.76
IRF1-202ENST00000405885 ENAHQ8N8S7 591 aaPredicted RBP19.83■□□□□ 0.76
IRF1-202ENST00000405885 SYT17Q9BSW7 474 aa19.83■□□□□ 0.76
IRF1-202ENST00000405885 ROBO3Q96MS0 1386 aa19.83■□□□□ 0.76
IRF1-202ENST00000405885 MYH1P12882 1939 aa19.82■□□□□ 0.76
IRF1-202ENST00000405885 AMOTL1Q8IY63 956 aa19.82■□□□□ 0.76
IRF1-202ENST00000405885 NSUN7Q8NE18 718 aaKnown RBP19.82■□□□□ 0.76
IRF1-202ENST00000405885 ZSCAN10Q96SZ4 725 aaPredicted RBP19.82■□□□□ 0.76
IRF1-202ENST00000405885 OSBPL5Q9H0X9 879 aaPredicted RBP19.82■□□□□ 0.76
IRF1-202ENST00000405885 LIFRP42702 1097 aa19.82■□□□□ 0.76
IRF1-202ENST00000405885 NUCB2P80303 420 aa19.82■□□□□ 0.76
IRF1-202ENST00000405885 WTAPQ15007 396 aa19.82■□□□□ 0.76
IRF1-202ENST00000405885 SEC23AQ15436 765 aa19.82■□□□□ 0.76
IRF1-202ENST00000405885 SGMS1Q86VZ5 419 aa19.82■□□□□ 0.76
IRF1-202ENST00000405885 MKNK2Q9HBH9 465 aa19.82■□□□□ 0.76
IRF1-202ENST00000405885 FAM198AQ9UFP1 575 aa19.82■□□□□ 0.76
IRF1-202ENST00000405885 TSPY2A6NKD2 308 aa19.81■□□□□ 0.76
IRF1-202ENST00000405885 ADD1P35611 737 aaKnown RBP19.81■□□□□ 0.76
IRF1-202ENST00000405885 TFAP4Q01664 338 aa19.81■□□□□ 0.76
IRF1-202ENST00000405885 CIAPIN1Q6FI81 312 aa19.81■□□□□ 0.76
IRF1-202ENST00000405885 MYO3BQ8WXR4 1341 aa19.81■□□□□ 0.76
IRF1-202ENST00000405885 ARFGEF1Q9Y6D6 1849 aa19.81■□□□□ 0.76
IRF1-202ENST00000405885 BRD1O95696 1058 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 PCP11498 1178 aaKnown RBP19.8■□□□□ 0.76
IRF1-202ENST00000405885 CDC27P30260 824 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 CDK8P49336 464 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 SART3Q15020 963 aaKnown RBP19.8■□□□□ 0.76
IRF1-202ENST00000405885 FOXD4L6Q3SYB3 417 aaPredicted RBP19.8■□□□□ 0.76
IRF1-202ENST00000405885 FOXD4L3Q6VB84 417 aaPredicted RBP19.8■□□□□ 0.76
IRF1-202ENST00000405885 ARHGAP27Q6ZUM4 889 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 SLC12A7Q9Y666 1083 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 LTBP3Q9NS15 1303 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 ECM29Q5VYK3 1845 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 CLRN2A0PK11 232 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 ERICH2A1L162 156 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 PTPDC1A2A3K4 754 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 SPDYE2BA6NHP3 402 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 CCDC69A6NI79 296 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 SPDYE6P0CI01 402 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 C16orf86Q6ZW13 317 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 OGFOD1Q8N543 542 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 IL17RBQ9NRM6 502 aa19.8■□□□□ 0.76
IRF1-202ENST00000405885 ZBTB43O43298 467 aa19.79■□□□□ 0.76
IRF1-202ENST00000405885 EGFRP00533 1210 aa19.79■□□□□ 0.76
IRF1-202ENST00000405885 RASA1P20936 1047 aa19.79■□□□□ 0.76
IRF1-202ENST00000405885 METAP2P50579 478 aaKnown RBP eCLIP19.79■□□□□ 0.76
IRF1-202ENST00000405885 IQCA1Q86XH1 822 aa19.79■□□□□ 0.76
IRF1-202ENST00000405885 DDTLA6NHG4 134 aaPredicted RBP19.79■□□□□ 0.76
IRF1-202ENST00000405885 STX6O43752 255 aa19.79■□□□□ 0.76
IRF1-202ENST00000405885 FOSBP53539 338 aa19.79■□□□□ 0.76
IRF1-202ENST00000405885 SH3BP5LQ7L8J4 393 aa19.79■□□□□ 0.76
IRF1-202ENST00000405885 SMARCC2Q8TAQ2 1214 aa19.79■□□□□ 0.76
IRF1-202ENST00000405885 FAM217BQ9NTX9 383 aaPredicted RBP19.79■□□□□ 0.76
IRF1-202ENST00000405885 FAM196BA6NMK8 535 aa19.78■□□□□ 0.76
IRF1-202ENST00000405885 LARP1BQ659C4 914 aaKnown RBP19.78■□□□□ 0.76
IRF1-202ENST00000405885 AGBL3Q8NEM8 1001 aa19.78■□□□□ 0.76
IRF1-202ENST00000405885 SCAF8Q9UPN6 1271 aaKnown RBP19.78■□□□□ 0.76
IRF1-202ENST00000405885 GJA3Q9Y6H8 435 aa19.78■□□□□ 0.76
IRF1-202ENST00000405885 IFIT1BQ5T764 474 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms