RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 PLEKHM2Q8IWE5 1019 aa12.75□□□□□ -0.37
RPAIN-204ENST00000405578 NKX2-3Q8TAU0 364 aa12.75□□□□□ -0.37
RPAIN-204ENST00000405578 PI4K2BQ8TCG2 481 aa12.75□□□□□ -0.37
RPAIN-204ENST00000405578 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
RPAIN-204ENST00000405578 SALL3Q9BXA9 1300 aa12.74□□□□□ -0.37
RPAIN-204ENST00000405578 FARP2O94887 1054 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-204ENST00000405578 GNRH1P01148 92 aa12.74□□□□□ -0.37
RPAIN-204ENST00000405578 CCL5P13501 91 aa12.74□□□□□ -0.37
RPAIN-204ENST00000405578 CRKP46108 304 aa12.74□□□□□ -0.37
RPAIN-204ENST00000405578 MECOMQ03112 1051 aa12.74□□□□□ -0.37
RPAIN-204ENST00000405578 TNFAIP1Q13829 316 aa12.74□□□□□ -0.37
RPAIN-204ENST00000405578 NAA16Q6N069 864 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-204ENST00000405578 HHIPL2Q6UWX4 724 aa12.74□□□□□ -0.37
RPAIN-204ENST00000405578 CSADQ9Y600 493 aa12.74□□□□□ -0.37
RPAIN-204ENST00000405578 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 BTBD19C9JJ37 291 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 BAG3O95817 575 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 GJB1P08034 283 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 CTGFP29279 349 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 GRK4P32298 578 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 CERS3Q8IU89 383 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.73□□□□□ -0.37
RPAIN-204ENST00000405578 RAET1EQ8TD07 263 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 EVI5LQ96CN4 794 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 TEPSINQ96N21 525 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 PIH1D3Q9NQM4 214 aaKnown RBP12.73□□□□□ -0.37
RPAIN-204ENST00000405578 TMOD2Q9NZR1 351 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 ZNF70Q9UC06 446 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-204ENST00000405578 SRRDQ9UH36 339 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 NDUFB9Q9Y6M9 179 aa12.73□□□□□ -0.37
RPAIN-204ENST00000405578 MYPNQ86TC9 1320 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 SPDYE5A6NIY4 337 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 ZFYP08048 801 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-204ENST00000405578 CETPP11597 493 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 OSBPP22059 807 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 PDE4AP27815 886 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 PSMC4P43686 418 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 GRIK5Q16478 980 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 SLC9C2Q5TAH2 1124 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 TICAM2Q86XR7 235 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 KBTBD3Q8NAB2 608 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 NSUN4Q96CB9 384 aaKnown RBP12.72□□□□□ -0.37
RPAIN-204ENST00000405578 FAM163AQ96GL9 167 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-204ENST00000405578 TRIM47Q96LD4 638 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 ZDHHC15Q96MV8 337 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 FSD1Q9BTV5 496 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 RNF208Q9H0X6 261 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 ANTXR1Q9H6X2 564 aa12.72□□□□□ -0.37
RPAIN-204ENST00000405578 TDRD3Q9H7E2 651 aaKnown RBP12.72□□□□□ -0.37
RPAIN-204ENST00000405578 ZCCHC17Q9NP64 241 aaKnown RBP12.72□□□□□ -0.37
RPAIN-204ENST00000405578 MROH7-TTC4A0A0A0MT08 1334 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 AK9Q5TCS8 1911 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 TCP10L2B9ZVM9 353 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 EVI5O60447 810 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 MAP4K4O95819 1239 aaPredicted RBP12.71□□□□□ -0.37
RPAIN-204ENST00000405578 PLCG2P16885 1265 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 CYP7A1P22680 504 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 TMEM39BQ9GZU3 492 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 BIN2Q9UBW5 565 aaPredicted RBP12.71□□□□□ -0.37
RPAIN-204ENST00000405578 CPA4Q9UI42 421 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 SNCAIPQ9Y6H5 919 aa12.71□□□□□ -0.37
RPAIN-204ENST00000405578 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.38
RPAIN-204ENST00000405578 FMNL1O95466 1100 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-204ENST00000405578 RGS3P49796 1198 aa12.7□□□□□ -0.38
RPAIN-204ENST00000405578 UBXN2AP68543 259 aa12.7□□□□□ -0.38
RPAIN-204ENST00000405578 C17orf99Q6UX52 265 aa12.7□□□□□ -0.38
RPAIN-204ENST00000405578 Q7L0L9 218 aa12.7□□□□□ -0.38
RPAIN-204ENST00000405578 DEFB123Q8N688 67 aa12.7□□□□□ -0.38
RPAIN-204ENST00000405578 U2AF1L4Q8WU68 220 aaKnown RBP12.7□□□□□ -0.38
RPAIN-204ENST00000405578 RILPL2Q969X0 211 aa12.7□□□□□ -0.38
RPAIN-204ENST00000405578 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
RPAIN-204ENST00000405578 COL25A1Q9BXS0 654 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-204ENST00000405578 DAGLAQ9Y4D2 1042 aa12.7□□□□□ -0.38
RPAIN-204ENST00000405578 DOCK3Q8IZD9 2030 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 GAKO14976 1311 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 HIP1O00291 1037 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 PDE6AP16499 860 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 HOXD10P28358 340 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 TNNI2P48788 182 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 SNAPC2Q13487 334 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 UBE3CQ15386 1083 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 TTC22Q5TAA0 569 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 APOBEC3HQ6NTF7 200 aaKnown RBP12.69□□□□□ -0.38
RPAIN-204ENST00000405578 ERO1BQ86YB8 467 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 UNC93B1Q9H1C4 597 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 STXBP5LQ9Y2K9 1186 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 GTF3C3Q9Y5Q9 886 aa12.69□□□□□ -0.38
RPAIN-204ENST00000405578 ADGRA2Q96PE1 1338 aa12.68□□□□□ -0.38
RPAIN-204ENST00000405578 ZNF532Q9HCE3 1301 aa12.68□□□□□ -0.38
RPAIN-204ENST00000405578 GPR75-ASB3A0A0A6YYF3 556 aa12.68□□□□□ -0.38
RPAIN-204ENST00000405578 IRF6O14896 467 aa12.68□□□□□ -0.38
RPAIN-204ENST00000405578 RNF113AO15541 343 aaKnown RBP12.68□□□□□ -0.38
RPAIN-204ENST00000405578 ADD2P35612 726 aa12.68□□□□□ -0.38
RPAIN-204ENST00000405578 BTDP43251 543 aa12.68□□□□□ -0.38
RPAIN-204ENST00000405578 PRKCZQ05513 592 aa12.68□□□□□ -0.38
RPAIN-204ENST00000405578 WRNIP1Q96S55 665 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms