RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 MAP2K2P36507 400 aa17.55■□□□□ 0.4
CDPF1-203ENST00000404583 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.55■□□□□ 0.4
CDPF1-203ENST00000404583 CSADQ9Y600 493 aa17.55■□□□□ 0.4
CDPF1-203ENST00000404583 PHF20L1A8MW92 1017 aa17.55■□□□□ 0.4
CDPF1-203ENST00000404583 M0R2C6 588 aa17.55■□□□□ 0.4
CDPF1-203ENST00000404583 TBC1D12O60347 775 aa17.55■□□□□ 0.4
CDPF1-203ENST00000404583 HSPA8P11142 646 aaKnown RBP17.55■□□□□ 0.4
CDPF1-203ENST00000404583 KIF23Q02241 960 aaPredicted RBP17.55■□□□□ 0.4
CDPF1-203ENST00000404583 STRBPQ96SI9 672 aaKnown RBP17.55■□□□□ 0.4
CDPF1-203ENST00000404583 DCP1AQ9NPI6 582 aaPredicted RBP17.55■□□□□ 0.4
CDPF1-203ENST00000404583 TSKSQ9UJT2 592 aa17.55■□□□□ 0.4
CDPF1-203ENST00000404583 SLC4A4Q9Y6R1 1079 aa17.55■□□□□ 0.4
CDPF1-203ENST00000404583 ZMYM1Q5SVZ6 1142 aa17.54■□□□□ 0.4
CDPF1-203ENST00000404583 SPRYD7Q5W111 196 aa17.54■□□□□ 0.4
CDPF1-203ENST00000404583 CNKSR2Q8WXI2 1034 aa17.54■□□□□ 0.4
CDPF1-203ENST00000404583 WNK4Q96J92 1243 aa17.54■□□□□ 0.4
CDPF1-203ENST00000404583 SNCAIPQ9Y6H5 919 aa17.54■□□□□ 0.4
CDPF1-203ENST00000404583 GPAA1O43292 621 aa17.53■□□□□ 0.4
CDPF1-203ENST00000404583 POLR3DP05423 398 aaPredicted RBP17.53■□□□□ 0.4
CDPF1-203ENST00000404583 HLA-DOAP06340 250 aa17.53■□□□□ 0.4
CDPF1-203ENST00000404583 GJA5P36382 358 aa17.53■□□□□ 0.4
CDPF1-203ENST00000404583 MAP2K1Q02750 393 aaPredicted RBP17.53■□□□□ 0.4
CDPF1-203ENST00000404583 SKAP1Q86WV1 359 aa17.53■□□□□ 0.4
CDPF1-203ENST00000404583 FOXP4Q8IVH2 680 aaPredicted RBP17.53■□□□□ 0.4
CDPF1-203ENST00000404583 OPTNQ96CV9 577 aa17.53■□□□□ 0.4
CDPF1-203ENST00000404583 PRDM10Q9NQV6 1147 aa17.53■□□□□ 0.4
CDPF1-203ENST00000404583 ATP8A2Q9NTI2 1148 aa17.53■□□□□ 0.4
CDPF1-203ENST00000404583 MCM9Q9NXL9 1143 aa17.53■□□□□ 0.4
CDPF1-203ENST00000404583 DDX60LQ5H9U9 1706 aaKnown RBP17.53■□□□□ 0.4
CDPF1-203ENST00000404583 PLCD1P51178 756 aa17.52■□□□□ 0.4
CDPF1-203ENST00000404583 EVX2Q03828 476 aa17.52■□□□□ 0.4
CDPF1-203ENST00000404583 TTC22Q5TAA0 569 aa17.52■□□□□ 0.4
CDPF1-203ENST00000404583 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.4
CDPF1-203ENST00000404583 CRACR2BQ8N4Y2 399 aaPredicted RBP17.52■□□□□ 0.4
CDPF1-203ENST00000404583 DNAJC18Q9H819 358 aa17.52■□□□□ 0.4
CDPF1-203ENST00000404583 HERC5Q9UII4 1024 aaKnown RBP17.52■□□□□ 0.4
CDPF1-203ENST00000404583 GSPT1P15170 499 aaKnown RBP17.51■□□□□ 0.39
CDPF1-203ENST00000404583 TTC6Q86TZ1 520 aa17.51■□□□□ 0.39
CDPF1-203ENST00000404583 OTUD5Q96G74 571 aa17.51■□□□□ 0.39
CDPF1-203ENST00000404583 FAM227BQ96M60 508 aa17.51■□□□□ 0.39
CDPF1-203ENST00000404583 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
CDPF1-203ENST00000404583 GSG1L2A8MUP6 293 aa17.5■□□□□ 0.39
CDPF1-203ENST00000404583 CTNND1O60716 968 aaKnown RBP17.5■□□□□ 0.39
CDPF1-203ENST00000404583 ZBTB48P10074 688 aaPredicted RBP17.5■□□□□ 0.39
CDPF1-203ENST00000404583 CYP2D6P10635 497 aa17.5■□□□□ 0.39
CDPF1-203ENST00000404583 SDSP20132 328 aa17.5■□□□□ 0.39
CDPF1-203ENST00000404583 RRP1BQ14684 758 aaKnown RBP17.5■□□□□ 0.39
CDPF1-203ENST00000404583 NOL9Q5SY16 702 aaKnown RBP17.5■□□□□ 0.39
CDPF1-203ENST00000404583 ERICH6BQ5W0A0 696 aa17.5■□□□□ 0.39
CDPF1-203ENST00000404583 CCDC129Q6ZRS4 1044 aa17.5■□□□□ 0.39
CDPF1-203ENST00000404583 ERO1BQ86YB8 467 aa17.5■□□□□ 0.39
CDPF1-203ENST00000404583 ATAD5Q96QE3 1844 aa17.5■□□□□ 0.39
CDPF1-203ENST00000404583 CASP8AP2Q9UKL3 1982 aa17.5■□□□□ 0.39
CDPF1-203ENST00000404583 A0A0D9SFI3 127 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 SPDYE5A6NIY4 337 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 USP17L12C9JPN9 530 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 USP17L21D6R901 530 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 NMIQ13287 307 aaPredicted RBP17.49■□□□□ 0.39
CDPF1-203ENST00000404583 DOCK1Q14185 1865 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 TICAM2Q86XR7 235 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 SCYL3Q8IZE3 742 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 DDRGK1Q96HY6 314 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 HELLSQ9NRZ9 838 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 PPP4R2Q9NY27 417 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 SERPINB13Q9UIV8 391 aa17.49■□□□□ 0.39
CDPF1-203ENST00000404583 CYP2D7A0A087X1C5 515 aa17.48■□□□□ 0.39
CDPF1-203ENST00000404583 PATL2C9JE40 543 aaKnown RBP17.48■□□□□ 0.39
CDPF1-203ENST00000404583 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
CDPF1-203ENST00000404583 APPP05067 770 aa17.48■□□□□ 0.39
CDPF1-203ENST00000404583 GNAT2P19087 354 aa17.48■□□□□ 0.39
CDPF1-203ENST00000404583 CTR9Q6PD62 1173 aa17.48■□□□□ 0.39
CDPF1-203ENST00000404583 EHD4Q9H223 541 aa17.48■□□□□ 0.39
CDPF1-203ENST00000404583 PICK1Q9NRD5 415 aa17.48■□□□□ 0.39
CDPF1-203ENST00000404583 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.48■□□□□ 0.39
CDPF1-203ENST00000404583 LAMB1P07942 1786 aa17.48■□□□□ 0.39
CDPF1-203ENST00000404583 IRF6O14896 467 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 PTPRAP18433 802 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 CAP2P40123 477 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 PPATQ06203 517 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 MCMDC2Q4G0Z9 681 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 BEGAINQ9BUH8 593 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 EPB41L4AQ9HCS5 686 aaPredicted RBP17.47■□□□□ 0.39
CDPF1-203ENST00000404583 MANSC4A6NHS7 340 aaPredicted RBP17.47■□□□□ 0.39
CDPF1-203ENST00000404583 TM4SF4P48230 202 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 JAG1P78504 1218 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 GABPAQ06546 454 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 PPIL2Q13356 520 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 C12orf60Q5U649 245 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 TATDN1Q6P1N9 297 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 GIMAP6Q6P9H5 292 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 CCDC84Q86UT8 332 aaPredicted RBP17.47■□□□□ 0.39
CDPF1-203ENST00000404583 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
CDPF1-203ENST00000404583 IFNL3Q8IZI9 196 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 DYNLL2Q96FJ2 89 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 MS4A4AQ96JQ5 239 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 PHIPQ8WWQ0 1821 aa17.47■□□□□ 0.39
CDPF1-203ENST00000404583 MYH8P13535 1937 aa17.46■□□□□ 0.39
CDPF1-203ENST00000404583 GDF11O95390 407 aa17.46■□□□□ 0.39
CDPF1-203ENST00000404583 TDO2P48775 406 aa17.46■□□□□ 0.39
CDPF1-203ENST00000404583 SREBF2Q12772 1141 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms