RNA–Protein interactions for RNA: ENST00000404574.5

SMTN-204, Transcript of smoothelin, humanhuman

TSL 2 BASIC

Gene SMTN, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-204ENST00000404574 ROBO3Q96MS0 1386 aa23.28■■□□□ 1.32
SMTN-204ENST00000404574 MCM5P33992 734 aa23.28■■□□□ 1.32
SMTN-204ENST00000404574 EVX2Q03828 476 aa23.28■■□□□ 1.32
SMTN-204ENST00000404574 FAM83AQ86UY5 434 aa23.28■■□□□ 1.32
SMTN-204ENST00000404574 B4E1Z4 1266 aa23.27■■□□□ 1.32
SMTN-204ENST00000404574 FGRP09769 529 aa23.27■■□□□ 1.32
SMTN-204ENST00000404574 ESR2Q92731 530 aa23.27■■□□□ 1.32
SMTN-204ENST00000404574 DYNLL2Q96FJ2 89 aa23.27■■□□□ 1.32
SMTN-204ENST00000404574 MKNK2Q9HBH9 465 aa23.27■■□□□ 1.32
SMTN-204ENST00000404574 PI4KBQ9UBF8 816 aa23.27■■□□□ 1.32
SMTN-204ENST00000404574 SERPINB13Q9UIV8 391 aa23.27■■□□□ 1.32
SMTN-204ENST00000404574 MYH1P12882 1939 aa23.26■■□□□ 1.31
SMTN-204ENST00000404574 IQCA1LA6NCM1 817 aa23.26■■□□□ 1.31
SMTN-204ENST00000404574 FGD1P98174 961 aa23.26■■□□□ 1.31
SMTN-204ENST00000404574 BECN1Q14457 450 aa23.26■■□□□ 1.31
SMTN-204ENST00000404574 MB21D2Q8IYB1 491 aaPredicted RBP23.26■■□□□ 1.31
SMTN-204ENST00000404574 TACC3Q9Y6A5 838 aa23.26■■□□□ 1.31
SMTN-204ENST00000404574 DDTLA6NHG4 134 aaPredicted RBP23.25■■□□□ 1.31
SMTN-204ENST00000404574 ORC4O43929 436 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 KDM4AO75164 1064 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 PRDM1O75626 825 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 C16orf86Q6ZW13 317 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 SNX21Q969T3 373 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 TRIM34Q9BYJ4 488 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 DDX60LQ5H9U9 1706 aaKnown RBP23.25■■□□□ 1.31
SMTN-204ENST00000404574 LAMB1P07942 1786 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 ATRNL1Q5VV63 1379 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 RANBP6O60518 1105 aaKnown RBP23.25■■□□□ 1.31
SMTN-204ENST00000404574 NT5C2P49902 561 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 HSCBQ8IWL3 235 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 CRACR2BQ8N4Y2 399 aaPredicted RBP23.25■■□□□ 1.31
SMTN-204ENST00000404574 TTC14Q96N46 770 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 EHD4Q9H223 541 aa23.25■■□□□ 1.31
SMTN-204ENST00000404574 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.25■■□□□ 1.31
SMTN-204ENST00000404574 COL2A1P02458 1487 aaPredicted RBP23.24■■□□□ 1.31
SMTN-204ENST00000404574 CNTNAP1P78357 1384 aa23.24■■□□□ 1.31
SMTN-204ENST00000404574 CDK8P49336 464 aa23.24■■□□□ 1.31
SMTN-204ENST00000404574 MCM2P49736 904 aa23.24■■□□□ 1.31
SMTN-204ENST00000404574 HIRAP54198 1017 aaPredicted RBP23.24■■□□□ 1.31
SMTN-204ENST00000404574 EXOSC10Q01780 885 aaKnown RBP23.24■■□□□ 1.31
SMTN-204ENST00000404574 COL9A3Q14050 684 aaPredicted RBP23.24■■□□□ 1.31
SMTN-204ENST00000404574 ANKRD1Q15327 319 aa23.24■■□□□ 1.31
SMTN-204ENST00000404574 ANGEL2Q5VTE6 544 aaKnown RBP23.24■■□□□ 1.31
SMTN-204ENST00000404574 SH3BP5LQ7L8J4 393 aa23.24■■□□□ 1.31
SMTN-204ENST00000404574 APOBEC3FQ8IUX4 373 aaKnown RBP23.24■■□□□ 1.31
SMTN-204ENST00000404574 FOXP4Q8IVH2 680 aaPredicted RBP23.24■■□□□ 1.31
SMTN-204ENST00000404574 TCEANC2Q96MN5 208 aa23.24■■□□□ 1.31
SMTN-204ENST00000404574 CSRNP1Q96S65 589 aa23.24■■□□□ 1.31
SMTN-204ENST00000404574 ZSWIM5Q9P217 1185 aa23.24■■□□□ 1.31
SMTN-204ENST00000404574 SWAP70Q9UH65 585 aa23.24■■□□□ 1.31
SMTN-204ENST00000404574 ASTN2O75129 1339 aaPredicted RBP23.24■■□□□ 1.31
SMTN-204ENST00000404574 PRC1O43663 620 aa23.23■■□□□ 1.31
SMTN-204ENST00000404574 EPHX2P34913 555 aa23.23■■□□□ 1.31
SMTN-204ENST00000404574 RASA3Q14644 834 aa23.23■■□□□ 1.31
SMTN-204ENST00000404574 USP50Q70EL3 339 aaPredicted RBP23.23■■□□□ 1.31
SMTN-204ENST00000404574 CHST3Q7LGC8 479 aa23.23■■□□□ 1.31
SMTN-204ENST00000404574 ZNF444Q8N0Y2 327 aaPredicted RBP23.23■■□□□ 1.31
SMTN-204ENST00000404574 TMEM39BQ9GZU3 492 aa23.23■■□□□ 1.31
SMTN-204ENST00000404574 GGA3Q9NZ52 723 aa23.23■■□□□ 1.31
SMTN-204ENST00000404574 TAOK2Q9UL54 1235 aa23.23■■□□□ 1.31
SMTN-204ENST00000404574 WDR19Q8NEZ3 1342 aa23.23■■□□□ 1.31
SMTN-204ENST00000404574 GABPAQ06546 454 aa23.22■■□□□ 1.31
SMTN-204ENST00000404574 SLC44A5Q8NCS7 719 aa23.22■■□□□ 1.31
SMTN-204ENST00000404574 ALDH8A1Q9H2A2 487 aaPredicted RBP23.22■■□□□ 1.31
SMTN-204ENST00000404574 AK2P54819 239 aa23.22■■□□□ 1.31
SMTN-204ENST00000404574 SART3Q15020 963 aaKnown RBP23.22■■□□□ 1.31
SMTN-204ENST00000404574 DAXXQ9UER7 740 aaPredicted RBP23.22■■□□□ 1.31
SMTN-204ENST00000404574 TSPY2A6NKD2 308 aa23.21■■□□□ 1.31
SMTN-204ENST00000404574 CD2BP2O95400 341 aaKnown RBP23.21■■□□□ 1.31
SMTN-204ENST00000404574 Q6ZUG5 572 aa23.21■■□□□ 1.31
SMTN-204ENST00000404574 CYB5R4Q7L1T6 521 aa23.21■■□□□ 1.31
SMTN-204ENST00000404574 LRRC2Q9BYS8 371 aa23.21■■□□□ 1.31
SMTN-204ENST00000404574 TBC1D2Q9BYX2 928 aa23.21■■□□□ 1.31
SMTN-204ENST00000404574 DEFB129Q9H1M3 183 aa23.21■■□□□ 1.31
SMTN-204ENST00000404574 ANTXR2P58335 489 aa23.2■■□□□ 1.3
SMTN-204ENST00000404574 NOL8Q76FK4 1167 aaKnown RBP23.2■■□□□ 1.3
SMTN-204ENST00000404574 IQCA1Q86XH1 822 aa23.2■■□□□ 1.3
SMTN-204ENST00000404574 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
SMTN-204ENST00000404574 TMEM87BQ96K49 555 aa23.2■■□□□ 1.3
SMTN-204ENST00000404574 UBAC1Q9BSL1 405 aa23.2■■□□□ 1.3
SMTN-204ENST00000404574 SCAF8Q9UPN6 1271 aaKnown RBP23.2■■□□□ 1.3
SMTN-204ENST00000404574 ERICH2A1L162 156 aa23.19■■□□□ 1.3
SMTN-204ENST00000404574 PNMA8AQ86V59 439 aaPredicted RBP23.19■■□□□ 1.3
SMTN-204ENST00000404574 MTA3Q9BTC8 594 aa23.19■■□□□ 1.3
SMTN-204ENST00000404574 HERC5Q9UII4 1024 aaKnown RBP23.19■■□□□ 1.3
SMTN-204ENST00000404574 PITPNM2Q9BZ72 1349 aa23.19■■□□□ 1.3
SMTN-204ENST00000404574 TSPY3P0CV98 308 aa23.19■■□□□ 1.3
SMTN-204ENST00000404574 TSPY8P0CW00 308 aa23.19■■□□□ 1.3
SMTN-204ENST00000404574 RASA1P20936 1047 aa23.19■■□□□ 1.3
SMTN-204ENST00000404574 TFAP4Q01664 338 aa23.19■■□□□ 1.3
SMTN-204ENST00000404574 FAM47AQ5JRC9 791 aa23.19■■□□□ 1.3
SMTN-204ENST00000404574 NKX2-3Q8TAU0 364 aa23.19■■□□□ 1.3
SMTN-204ENST00000404574 TAF1DQ9H5J8 278 aaPredicted RBP23.19■■□□□ 1.3
SMTN-204ENST00000404574 K7ELQ4 463 aaPredicted RBP23.18■■□□□ 1.3
SMTN-204ENST00000404574 IFIT3O14879 490 aaKnown RBP23.18■■□□□ 1.3
SMTN-204ENST00000404574 METTL16Q86W50 562 aaKnown RBP23.18■■□□□ 1.3
SMTN-204ENST00000404574 FBXL16Q8N461 479 aa23.18■■□□□ 1.3
SMTN-204ENST00000404574 ZC3H15Q8WU90 426 aaKnown RBP23.18■■□□□ 1.3
SMTN-204ENST00000404574 LIMCH1Q9UPQ0 1083 aa23.18■■□□□ 1.3
SMTN-204ENST00000404574 PPP2R3BQ9Y5P8 575 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms