RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 HDAC6Q9UBN7 1215 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 HPSEQ9Y251 543 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 LRRC37A3O60309 1634 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 IFIT3O14879 490 aaKnown RBP10.91□□□□□ -0.66
SMC1B-202ENST00000404354 GPTP24298 496 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 HSP90B2PQ58FF3 399 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 CPLX2Q6PUV4 134 aaKnown RBP10.91□□□□□ -0.66
SMC1B-202ENST00000404354 KRI1Q8N9T8 703 aaKnown RBP10.91□□□□□ -0.66
SMC1B-202ENST00000404354 BLZF1Q9H2G9 400 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 GUCA1BQ9UMX6 200 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 NCAPD2Q15021 1401 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 ANKARQ7Z5J8 1434 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 TTC19Q6DKK2 380 aaPredicted RBP10.91□□□□□ -0.66
SMC1B-202ENST00000404354 SRGAP1Q7Z6B7 1085 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 MAP3K14Q99558 947 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 CWC25Q9NXE8 425 aaPredicted RBP10.91□□□□□ -0.66
SMC1B-202ENST00000404354 BEND6Q5SZJ8 279 aaPredicted RBP10.9□□□□□ -0.66
SMC1B-202ENST00000404354 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.9□□□□□ -0.66
SMC1B-202ENST00000404354 SRLQ86TD4 932 aa10.9□□□□□ -0.66
SMC1B-202ENST00000404354 NBPF3Q9H094 633 aa10.9□□□□□ -0.66
SMC1B-202ENST00000404354 CWC15Q9P013 229 aaKnown RBP10.9□□□□□ -0.66
SMC1B-202ENST00000404354 ADGRG1Q9Y653 693 aa10.9□□□□□ -0.66
SMC1B-202ENST00000404354 RNF225M0QZC1 329 aaPredicted RBP10.9□□□□□ -0.66
SMC1B-202ENST00000404354 CD44P16070 742 aaKnown RBP10.9□□□□□ -0.66
SMC1B-202ENST00000404354 KCNJ6P48051 423 aa10.9□□□□□ -0.66
SMC1B-202ENST00000404354 FXR1P51114 621 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMC1B-202ENST00000404354 DNAJC21Q5F1R6 531 aaKnown RBP10.9□□□□□ -0.66
SMC1B-202ENST00000404354 HOOK1Q9UJC3 728 aaKnown RBP10.9□□□□□ -0.66
SMC1B-202ENST00000404354 DIP2AQ14689 1571 aa10.9□□□□□ -0.66
SMC1B-202ENST00000404354 BAZ2BQ9UIF8 2168 aaKnown RBP10.9□□□□□ -0.67
SMC1B-202ENST00000404354 CCDC151A5D8V7 595 aa10.9□□□□□ -0.67
SMC1B-202ENST00000404354 TOB1P50616 345 aaPredicted RBP10.9□□□□□ -0.67
SMC1B-202ENST00000404354 E2F4Q16254 413 aa10.9□□□□□ -0.67
SMC1B-202ENST00000404354 GOLGA5Q8TBA6 731 aa10.9□□□□□ -0.67
SMC1B-202ENST00000404354 UBXN6Q9BZV1 441 aa10.9□□□□□ -0.67
SMC1B-202ENST00000404354 UBN2Q6ZU65 1347 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 RGPD2P0DJD1 1756 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 SMIM22K7EJ46 135 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 PRDM1O75626 825 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 TATP17735 454 aaPredicted RBP10.89□□□□□ -0.67
SMC1B-202ENST00000404354 CASP7P55210 303 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 TBX2Q13207 712 aaPredicted RBP10.89□□□□□ -0.67
SMC1B-202ENST00000404354 CASP8Q14790 479 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 DRC1Q96MC2 740 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 CSRNP2Q9H175 543 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 FAM204AQ9H8W3 233 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 AKAP2Q9Y2D5 859 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 SLC12A7Q9Y666 1083 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 CHD2O14647 1828 aaKnown RBP10.89□□□□□ -0.67
SMC1B-202ENST00000404354 LRRIQ3A6PVS8 624 aaPredicted RBP10.89□□□□□ -0.67
SMC1B-202ENST00000404354 PHKG2P15735 406 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 HDXQ7Z353 690 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 EXOC4Q96A65 974 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 NUP88Q99567 741 aaPredicted RBP10.89□□□□□ -0.67
SMC1B-202ENST00000404354 CDC23Q9UJX2 597 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 CTAGE9A4FU28 777 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 TUBB4AP04350 444 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 SSRP1Q08945 709 aaKnown RBP10.89□□□□□ -0.67
SMC1B-202ENST00000404354 SART3Q15020 963 aaKnown RBP10.89□□□□□ -0.67
SMC1B-202ENST00000404354 METTL24Q5JXM2 366 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 LRP10Q7Z4F1 713 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 NUTM2AQ8IVF1 878 aaPredicted RBP10.89□□□□□ -0.67
SMC1B-202ENST00000404354 PLBD2Q8NHP8 589 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 APPBP2Q92624 585 aa10.89□□□□□ -0.67
SMC1B-202ENST00000404354 IQSEC3Q9UPP2 1182 aaPredicted RBP10.89□□□□□ -0.67
SMC1B-202ENST00000404354 HEG1Q9ULI3 1381 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 CYP27B1O15528 508 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 NOM1Q5C9Z4 860 aaKnown RBP10.88□□□□□ -0.67
SMC1B-202ENST00000404354 TAB2Q9NYJ8 693 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 ZSWIM5Q9P217 1185 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 CTAGE15A4D2H0 777 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 N4BP3O15049 544 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 PRKAB2O43741 272 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 PPP6R2O75170 966 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 CTAGE8P0CG41 777 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 MCAMP43121 646 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 SAFBQ15424 915 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMC1B-202ENST00000404354 CTAGE6Q86UF2 777 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 NOSTRINQ8IVI9 506 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 CTAGE4Q8IX94 777 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 CHP1Q99653 195 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 WWC3Q9ULE0 1092 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 ZMYM6O95789 1325 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 A0A087X0B3 334 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 NR1I3Q14994 352 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 KCTD19Q17RG1 926 aaPredicted RBP10.88□□□□□ -0.67
SMC1B-202ENST00000404354 THEMISQ8N1K5 641 aaPredicted RBP10.88□□□□□ -0.67
SMC1B-202ENST00000404354 EHD4Q9H223 541 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 CTNND2Q9UQB3 1225 aa10.88□□□□□ -0.67
SMC1B-202ENST00000404354 GOLGA6L9A6NEM1 432 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 H7C1W4 665 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 IBSPP21815 317 aaPredicted RBP10.87□□□□□ -0.67
SMC1B-202ENST00000404354 MDM2Q00987 491 aaPredicted RBP10.87□□□□□ -0.67
SMC1B-202ENST00000404354 MUM1L1Q5H9M0 696 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 PACS2Q86VP3 889 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 PSMB7Q99436 277 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 FAM217BQ9NTX9 383 aaPredicted RBP10.87□□□□□ -0.67
SMC1B-202ENST00000404354 L1RE1Q9UN81 338 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 ZNF532Q9HCE3 1301 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms