RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 PUS7LQ9H0K6 701 aaKnown RBP23.17■■□□□ 1.3
RTN4-207ENST00000402434 OSBPL3Q9H4L5 887 aa23.17■■□□□ 1.3
RTN4-207ENST00000402434 ARMT1Q9H993 441 aa23.17■■□□□ 1.3
RTN4-207ENST00000402434 RNF186Q9NXI6 227 aa23.17■■□□□ 1.3
RTN4-207ENST00000402434 TESPA1A2RU30 521 aaPredicted RBP23.16■■□□□ 1.3
RTN4-207ENST00000402434 MBD4O95243 580 aa23.16■■□□□ 1.3
RTN4-207ENST00000402434 PPATQ06203 517 aa23.16■■□□□ 1.3
RTN4-207ENST00000402434 LRRFIP1Q32MZ4 808 aaKnown RBP23.16■■□□□ 1.3
RTN4-207ENST00000402434 OTUD5Q96G74 571 aa23.16■■□□□ 1.3
RTN4-207ENST00000402434 SAP30BPQ9UHR5 308 aaKnown RBP23.16■■□□□ 1.3
RTN4-207ENST00000402434 FAM196BA6NMK8 535 aa23.15■■□□□ 1.3
RTN4-207ENST00000402434 HSPA8P11142 646 aaKnown RBP23.15■■□□□ 1.3
RTN4-207ENST00000402434 SCYL3Q8IZE3 742 aa23.15■■□□□ 1.3
RTN4-207ENST00000402434 APPBP2Q92624 585 aa23.15■■□□□ 1.3
RTN4-207ENST00000402434 MYH1P12882 1939 aa23.14■■□□□ 1.3
RTN4-207ENST00000402434 SIPA1L1O43166 1804 aa23.14■■□□□ 1.3
RTN4-207ENST00000402434 IRF6O14896 467 aa23.14■■□□□ 1.29
RTN4-207ENST00000402434 HLA-DOAP06340 250 aa23.14■■□□□ 1.29
RTN4-207ENST00000402434 PPIL2Q13356 520 aa23.14■■□□□ 1.29
RTN4-207ENST00000402434 OSBP2Q969R2 916 aa23.14■■□□□ 1.29
RTN4-207ENST00000402434 EVI5LQ96CN4 794 aa23.14■■□□□ 1.29
RTN4-207ENST00000402434 DNAJC18Q9H819 358 aa23.14■■□□□ 1.29
RTN4-207ENST00000402434 DCP1AQ9NPI6 582 aaPredicted RBP23.14■■□□□ 1.29
RTN4-207ENST00000402434 PRKAB2O43741 272 aa23.13■■□□□ 1.29
RTN4-207ENST00000402434 TRPA1O75762 1119 aa23.13■■□□□ 1.29
RTN4-207ENST00000402434 GTF2A2P52657 109 aa23.13■■□□□ 1.29
RTN4-207ENST00000402434 LBX1P52954 281 aa23.13■■□□□ 1.29
RTN4-207ENST00000402434 TTC6Q86TZ1 520 aa23.13■■□□□ 1.29
RTN4-207ENST00000402434 SDR42E1Q8WUS8 393 aa23.13■■□□□ 1.29
RTN4-207ENST00000402434 FSD1Q9BTV5 496 aa23.13■■□□□ 1.29
RTN4-207ENST00000402434 EHD4Q9H223 541 aa23.13■■□□□ 1.29
RTN4-207ENST00000402434 ATP8A2Q9NTI2 1148 aa23.13■■□□□ 1.29
RTN4-207ENST00000402434 PTPRAP18433 802 aa23.12■■□□□ 1.29
RTN4-207ENST00000402434 IFNL1Q8IU54 200 aa23.12■■□□□ 1.29
RTN4-207ENST00000402434 STRBPQ96SI9 672 aaKnown RBP23.12■■□□□ 1.29
RTN4-207ENST00000402434 PRDM10Q9NQV6 1147 aa23.12■■□□□ 1.29
RTN4-207ENST00000402434 CAP2P40123 477 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 RRP1BQ14684 758 aaKnown RBP23.11■■□□□ 1.29
RTN4-207ENST00000402434 TICAM2Q86XR7 235 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 PTPN18Q99952 460 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 PICK1Q9NRD5 415 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 TSKSQ9UJT2 592 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 KCNH4Q9UQ05 1017 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 IGF2BP3O00425 579 aaKnown RBP eCLIP23.11■■□□□ 1.29
RTN4-207ENST00000402434 ALDH1A1P00352 501 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 PLCD1P51178 756 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 SNAPC2Q13487 334 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 CRACR2BQ8N4Y2 399 aaPredicted RBP23.11■■□□□ 1.29
RTN4-207ENST00000402434 CFHR5Q9BXR6 569 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 MCM9Q9NXL9 1143 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 SERPINB13Q9UIV8 391 aa23.11■■□□□ 1.29
RTN4-207ENST00000402434 DDX60LQ5H9U9 1706 aaKnown RBP23.1■■□□□ 1.29
RTN4-207ENST00000402434 SLC4A8Q2Y0W8 1093 aa23.1■■□□□ 1.29
RTN4-207ENST00000402434 ZMYM1Q5SVZ6 1142 aa23.1■■□□□ 1.29
RTN4-207ENST00000402434 BRI3BPQ8WY22 251 aa23.1■■□□□ 1.29
RTN4-207ENST00000402434 SLC4A4Q9Y6R1 1079 aa23.1■■□□□ 1.29
RTN4-207ENST00000402434 ZHX2Q9Y6X8 837 aa23.1■■□□□ 1.29
RTN4-207ENST00000402434 CETPP11597 493 aa23.09■■□□□ 1.29
RTN4-207ENST00000402434 TATDN1Q6P1N9 297 aa23.09■■□□□ 1.29
RTN4-207ENST00000402434 TRIM34Q9BYJ4 488 aa23.09■■□□□ 1.29
RTN4-207ENST00000402434 DOCK1Q14185 1865 aa23.08■■□□□ 1.29
RTN4-207ENST00000402434 CCL15-CCL14A0A0B4J2E2 113 aa23.08■■□□□ 1.29
RTN4-207ENST00000402434 CXCL11O14625 94 aa23.08■■□□□ 1.29
RTN4-207ENST00000402434 POLR3DP05423 398 aaPredicted RBP23.08■■□□□ 1.29
RTN4-207ENST00000402434 PDE4AP27815 886 aa23.08■■□□□ 1.29
RTN4-207ENST00000402434 GABPAQ06546 454 aa23.08■■□□□ 1.29
RTN4-207ENST00000402434 CCL15Q16663 113 aa23.08■■□□□ 1.29
RTN4-207ENST00000402434 AFG3L2Q9Y4W6 797 aa23.08■■□□□ 1.29
RTN4-207ENST00000402434 M0R2C6 588 aa23.07■■□□□ 1.28
RTN4-207ENST00000402434 GPAA1O43292 621 aa23.07■■□□□ 1.28
RTN4-207ENST00000402434 OTUD7BQ6GQQ9 843 aa23.07■■□□□ 1.28
RTN4-207ENST00000402434 NAV1Q8NEY1 1877 aa23.07■■□□□ 1.28
RTN4-207ENST00000402434 GINM1Q9NU53 330 aa23.07■■□□□ 1.28
RTN4-207ENST00000402434 TAOK2Q9UL54 1235 aa23.07■■□□□ 1.28
RTN4-207ENST00000402434 GSG1L2A8MUP6 293 aa23.06■■□□□ 1.28
RTN4-207ENST00000402434 GNAT2P19087 354 aa23.06■■□□□ 1.28
RTN4-207ENST00000402434 COL13A1Q5TAT6 717 aaPredicted RBP23.06■■□□□ 1.28
RTN4-207ENST00000402434 GIMAP6Q6P9H5 292 aa23.06■■□□□ 1.28
RTN4-207ENST00000402434 DDRGK1Q96HY6 314 aa23.06■■□□□ 1.28
RTN4-207ENST00000402434 SEC62Q99442 399 aaKnown RBP23.06■■□□□ 1.28
RTN4-207ENST00000402434 ASNSP08243 561 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 JAG1P78504 1218 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 C12orf60Q5U649 245 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 TBC1D2Q9BYX2 928 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.05■■□□□ 1.28
RTN4-207ENST00000402434 TRIM6-TRIM34B2RNG4 842 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 USP17L12C9JPN9 530 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 USP17L21D6R901 530 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 TBC1D8O95759 1140 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 CYP2D6P10635 497 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 EVX2Q03828 476 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 MOGSQ13724 837 aa23.05■■□□□ 1.28
RTN4-207ENST00000402434 NOM1Q5C9Z4 860 aaKnown RBP23.05■■□□□ 1.28
RTN4-207ENST00000402434 ZCCHC17Q9NP64 241 aaKnown RBP23.05■■□□□ 1.28
RTN4-207ENST00000402434 BAZ2AQ9UIF9 1905 aaKnown RBP23.04■■□□□ 1.28
RTN4-207ENST00000402434 PHIPQ8WWQ0 1821 aa23.04■■□□□ 1.28
RTN4-207ENST00000402434 SHMT1P34896 483 aa23.04■■□□□ 1.28
RTN4-207ENST00000402434 CTR9Q6PD62 1173 aa23.04■■□□□ 1.28
RTN4-207ENST00000402434 CCDC84Q86UT8 332 aaPredicted RBP23.04■■□□□ 1.28
RTN4-207ENST00000402434 FAM43AQ8N2R8 423 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms