RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 KIF23Q02241 960 aaPredicted RBP14.29□□□□□ -0.12
CLIP4-203ENST00000401617 ZNF654Q8IZM8 581 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 TBC1D22AQ8WUA7 517 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 PHKBQ93100 1093 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 ALG1Q9BT22 464 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 RTFDC1Q9BY42 306 aaPredicted RBP14.29□□□□□ -0.12
CLIP4-203ENST00000401617 DDX60LQ5H9U9 1706 aaKnown RBP14.28□□□□□ -0.12
CLIP4-203ENST00000401617 CCDC196A0A1B0GTZ2 297 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 BAG3O95817 575 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 DIXDC1Q155Q3 683 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 RTN1Q16799 776 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 C12orf60Q5U649 245 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 NBPF11Q86T75 865 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 CCDC144CPQ8IYA2 1237 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 FUCA2Q9BTY2 467 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 GJB4Q9NTQ9 266 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 RTEL1Q9NZ71 1219 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 ROBO3Q96MS0 1386 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 FOCADQ5VW36 1801 aa14.28□□□□□ -0.12
CLIP4-203ENST00000401617 GPR75-ASB3A0A0A6YYF3 556 aa14.27□□□□□ -0.12
CLIP4-203ENST00000401617 C6orf229H3BNL8 230 aa14.27□□□□□ -0.12
CLIP4-203ENST00000401617 SLC3A2P08195 630 aaKnown RBP14.27□□□□□ -0.12
CLIP4-203ENST00000401617 CYP2D6P10635 497 aa14.27□□□□□ -0.12
CLIP4-203ENST00000401617 EVX2Q03828 476 aa14.27□□□□□ -0.12
CLIP4-203ENST00000401617 SSRP1Q08945 709 aaKnown RBP14.27□□□□□ -0.12
CLIP4-203ENST00000401617 SH3RF3Q8TEJ3 882 aaPredicted RBP14.27□□□□□ -0.12
CLIP4-203ENST00000401617 MASTLQ96GX5 879 aa14.27□□□□□ -0.12
CLIP4-203ENST00000401617 AIFM3Q96NN9 605 aa14.27□□□□□ -0.12
CLIP4-203ENST00000401617 POTEAQ6S8J7 498 aa14.27□□□□□ -0.13
CLIP4-203ENST00000401617 IQCA1Q86XH1 822 aa14.27□□□□□ -0.13
CLIP4-203ENST00000401617 PPP1R9BQ96SB3 815 aa14.27□□□□□ -0.13
CLIP4-203ENST00000401617 FTOQ9C0B1 505 aaKnown RBP eCLIP14.27□□□□□ -0.13
CLIP4-203ENST00000401617 COA1Q9GZY4 146 aa14.27□□□□□ -0.13
CLIP4-203ENST00000401617 GAKO14976 1311 aa14.27□□□□□ -0.13
CLIP4-203ENST00000401617 GOLGA6L4A6NEF3 574 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 KIF28PB7ZC32 967 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 PRDM1O75626 825 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 MYSM1Q5VVJ2 828 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 KRT40Q6A162 431 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 CRACR2BQ8N4Y2 399 aaPredicted RBP14.26□□□□□ -0.13
CLIP4-203ENST00000401617 WASF1Q92558 559 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 CAMKK2Q96RR4 588 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 DDX19AQ9NUU7 478 aaKnown RBP14.26□□□□□ -0.13
CLIP4-203ENST00000401617 POLR3EQ9NVU0 708 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 MCM9Q9NXL9 1143 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 SUGT1Q9Y2Z0 365 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 USP17L8P0C7I0 530 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 U2AF2P26368 475 aaKnown RBP eCLIP14.26□□□□□ -0.132e-8■■■■■ 36.5
CLIP4-203ENST00000401617 PDE4BQ07343 736 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 MFSD14BQ5SR56 506 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 RBM43Q6ZSC3 357 aaKnown RBP14.26□□□□□ -0.13
CLIP4-203ENST00000401617 MPNDQ8N594 471 aa14.26□□□□□ -0.13
CLIP4-203ENST00000401617 MYH1P12882 1939 aa14.25□□□□□ -0.13
CLIP4-203ENST00000401617 YEATS4O95619 227 aa14.25□□□□□ -0.13
CLIP4-203ENST00000401617 FUT2Q10981 343 aa14.25□□□□□ -0.13
CLIP4-203ENST00000401617 TROAPQ12815 778 aa14.25□□□□□ -0.13
CLIP4-203ENST00000401617 IFIT1BQ5T764 474 aaKnown RBP14.25□□□□□ -0.13
CLIP4-203ENST00000401617 SLF2Q8IX21 1173 aa14.25□□□□□ -0.13
CLIP4-203ENST00000401617 LINC00301Q8NCQ3 95 aa14.25□□□□□ -0.13
CLIP4-203ENST00000401617 NOL10Q9BSC4 688 aaKnown RBP14.25□□□□□ -0.13
CLIP4-203ENST00000401617 SLC26A6Q9BXS9 759 aa14.25□□□□□ -0.13
CLIP4-203ENST00000401617 DACT1Q9NYF0 836 aa14.25□□□□□ -0.13
CLIP4-203ENST00000401617 DDAH1O94760 285 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 PLCG2P16885 1265 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 USP5P45974 858 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 SLC15A2Q16348 729 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 ANO8Q9HCE9 1232 aaPredicted RBP14.24□□□□□ -0.13
CLIP4-203ENST00000401617 DEXIO95424 95 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 POLR3DP05423 398 aaPredicted RBP14.24□□□□□ -0.13
CLIP4-203ENST00000401617 CALM1P0DP23 149 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 CALM2P0DP24 149 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 CALM3P0DP25 149 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 GUCY1A2P33402 732 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 BTDP43251 543 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 RHBDL3P58872 404 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 CEBPZQ03701 1054 aaKnown RBP14.24□□□□□ -0.13
CLIP4-203ENST00000401617 CCDC173Q0VFZ6 552 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 MSL1Q68DK7 614 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 STYK1Q6J9G0 422 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 CATIPQ7Z7H3 387 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 TRIM22Q8IYM9 498 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 ANKS1AQ92625 1134 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 RNF26Q9BY78 433 aaPredicted RBP14.24□□□□□ -0.13
CLIP4-203ENST00000401617 NUP62CLQ9H1M0 184 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 CLSTN2Q9H4D0 955 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 SLX4Q8IY92 1834 aa14.24□□□□□ -0.13
CLIP4-203ENST00000401617 UBE2Q2LH0YL09 131 aa14.23□□□□□ -0.13
CLIP4-203ENST00000401617 NR1I2O75469 434 aa14.23□□□□□ -0.13
CLIP4-203ENST00000401617 TGFBRAP1Q8WUH2 860 aa14.23□□□□□ -0.13
CLIP4-203ENST00000401617 PDLIM2Q96JY6 352 aa14.23□□□□□ -0.13
CLIP4-203ENST00000401617 ZC3H12CQ9C0D7 883 aaKnown RBP14.23□□□□□ -0.13
CLIP4-203ENST00000401617 RBM28Q9NW13 759 aaKnown RBP14.23□□□□□ -0.13
CLIP4-203ENST00000401617 CLIC4Q9Y696 253 aa14.23□□□□□ -0.13
CLIP4-203ENST00000401617 UVSSAQ2YD98 709 aa14.23□□□□□ -0.13
CLIP4-203ENST00000401617 ADALQ6DHV7 355 aa14.23□□□□□ -0.13
CLIP4-203ENST00000401617 RCSD1Q6JBY9 416 aa14.23□□□□□ -0.13
CLIP4-203ENST00000401617 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
CLIP4-203ENST00000401617 DPP8Q6V1X1 898 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms