RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ARHGAP10A1A4S6 786 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 PYGBP11216 843 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 UBASH3AP57075 661 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 CHMP4BP1P59074 171 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 LRRC49Q8IUZ0 686 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 PIK3R5Q8WYR1 880 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 TSC22D3Q99576 134 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 TNIKQ9UKE5 1360 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 BAG2O95816 211 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 DAB2P98082 770 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 MICALL2Q8IY33 904 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 MMEP08473 750 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 OLFM1Q99784 485 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 TSC22D4Q9Y3Q8 395 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 C16orf62Q7Z3J2 963 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 MAIP1Q8WWC4 291 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 GUCY1B3Q02153 619 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 NUGGCQ68CJ6 796 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 HOMER3Q9NSC5 361 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 ZNF212Q9UDV6 495 aa9.49□□□□□ -0.89
CACNA1C-220ENST00000399655 MCM4P33991 863 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 APOBRQ0VD83 1088 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 KRT73Q86Y46 540 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 DONSONQ9NYP3 566 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 TTI1O43156 1089 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 SYNCRIPO60506 623 aaKnown RBP9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 SSRP1Q08945 709 aaKnown RBP9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 FSIP1Q8NA03 581 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 CFAP61Q8NHU2 1237 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 RPS6KC1Q96S38 1066 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 UPF3AQ9H1J1 476 aaKnown RBP9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 ZSWIM4Q9H7M6 989 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 MKNK2Q9HBH9 465 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 FGD4Q96M96 766 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 ATPIF1Q9UII2 106 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 MAP3K7O43318 606 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 C8orf74Q6P047 294 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 RAB44Q7Z6P3 723 aaPredicted RBP9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 DEAF1O75398 565 aaPredicted RBP9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 TRIM14Q14142 442 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 FBXL13Q8NEE6 735 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 ATP11BQ9Y2G3 1177 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 HGSO14964 777 aaPredicted RBP9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 CDC40O60508 579 aaKnown RBP eCLIP9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 ADCY5O95622 1261 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 HOXA7P31268 230 aaPredicted RBP9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 TSC22D1Q15714 1073 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 PIGUQ9H490 435 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 SNX1Q13596 522 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 IQCDQ96DY2 449 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 SERPINI1Q99574 410 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 DDIT3P35638 169 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 NOSTRINQ8IVI9 506 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 CNGB3Q9NQW8 809 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 KPNA2P52292 529 aaKnown RBP9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 TJAP1Q5JTD0 557 aa9.48□□□□□ -0.89
CACNA1C-220ENST00000399655 CCDC186Q7Z3E2 898 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 MRPL40Q9NQ50 206 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 DDX41Q9UJV9 622 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 CAB39Q9Y376 341 aaPredicted RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 SLC12A7Q9Y666 1083 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 MSR1P21757 451 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 SNAP25P60880 206 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 CCHCR1Q8TD31 782 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 COPG2Q9UBF2 871 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 H3BRJ5 948 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 RPL13P26373 211 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 PPP1R2P41236 205 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 TRIM59Q8IWR1 403 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 GSTA4O15217 222 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 XPOTO43592 962 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 NBPF7P0C2Y1 421 aaPredicted RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 SMARCA1P28370 1054 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 DEFA1P59665 94 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 DEFA3P59666 94 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 CASC4Q6P4E1 433 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 GIPC2Q8TF65 315 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 LZTFL1Q9NQ48 299 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 CEP164Q9UPV0 1460 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 NINQ8N4C6 2090 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 CEP55Q53EZ4 464 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 TRAF7Q6Q0C0 670 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 RTL3Q8N8U3 475 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 ARMC2Q8NEN0 867 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 RNF216Q9NWF9 866 aaPredicted RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 LRP2BPQ9P2M1 347 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 FBXW4P57775 412 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 ZGPATQ8N5A5 531 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 NUP58Q9BVL2 599 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 KIF27Q86VH2 1401 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 DIDO1Q9BTC0 2240 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 POTEFA5A3E0 1075 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 HIF1AQ16665 826 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 DENND6AQ8IWF6 608 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 KIF9Q9HAQ2 790 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 HS2ST1Q7LGA3 356 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 RBM27Q9P2N5 1060 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 STK38LQ9Y2H1 464 aa9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 HNRNPRO43390 633 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-220ENST00000399655 BRF1Q92994 677 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms