RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 PFDN1O60925 122 aa12.39□□□□□ -0.43
CACNA1C-208ENST00000399601 SERPINI2O75830 405 aa12.39□□□□□ -0.43
CACNA1C-208ENST00000399601 AFAP1L2Q8N4X5 818 aa12.39□□□□□ -0.43
CACNA1C-208ENST00000399601 OSBPP22059 807 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 PHLDB2Q86SQ0 1253 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 NCAPG2Q86XI2 1143 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 TAB3Q8N5C8 712 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 CD2APQ9Y5K6 639 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 UHRF1BP1LA0JNW5 1464 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 BRD2P25440 801 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 METAP2P50579 478 aaKnown RBP eCLIP12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 SCYL1Q96KG9 808 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 NAP1L4Q99733 375 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 TRIM56Q9BRZ2 755 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 PLCB4Q15147 1175 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 COPS6Q7L5N1 327 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 SLAIN2Q9P270 581 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 MUM1Q2TAK8 710 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 OCM2P0CE71 109 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 OCMP0CE72 109 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 SF3B3Q15393 1217 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 C2orf69Q8N8R5 385 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 AP5M1Q9H0R1 490 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 HELLSQ9NRZ9 838 aa12.38□□□□□ -0.43
CACNA1C-208ENST00000399601 MAEAQ7L5Y9 396 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 RPAP2Q8IXW5 612 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 NCOA7Q8NI08 942 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 DAAM1Q9Y4D1 1078 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 EBAG9O00559 213 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 TMPOP42166 694 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 HS1BP3Q53T59 392 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 SEL1L2Q5TEA6 688 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 TMCO5AQ8N6Q1 288 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 ZFYVE19Q96K21 471 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 KRT82Q9NSB4 513 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 SORBS3O60504 671 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 ANXA1P04083 346 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 HLA-DPA1P20036 260 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 CCDC85BQ15834 202 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 ZSCAN30Q86W11 494 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 EFCC1Q9HA90 598 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 STRN3Q13033 797 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 TRPC3Q13507 836 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 MX1P20591 662 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 FAM196AQ6ZSG2 479 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 MIGA1Q8NAN2 632 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 CEP19Q96LK0 163 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 HINFPQ9BQA5 517 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 SYTL2Q9HCH5 934 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 GPCPD1Q9NPB8 672 aa12.37□□□□□ -0.43
CACNA1C-208ENST00000399601 GJC2Q5T442 439 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 MARCKSP29966 332 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 CDC26Q8NHZ8 85 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 MRFAP1L1Q96HT8 127 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 LBHD1Q9BQE6 289 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 STX1AQ16623 288 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 HIF1AQ16665 826 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 CAPN12Q6ZSI9 719 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 PNMA8AQ86V59 439 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 HAUS2Q9NVX0 235 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 FIS1Q9Y3D6 152 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 CAMSAP2Q08AD1 1489 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 GTPBP10A4D1E9 387 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 LONP1P36776 959 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 UBASH3AP57075 661 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 NSMCE1Q8WV22 266 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 NBNO60934 754 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 CCNA1P78396 465 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 UBE3AQ05086 875 aa12.36□□□□□ -0.43
CACNA1C-208ENST00000399601 RAD50Q92878 1312 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 TSNAXIP1Q2TAA8 658 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 CNKSR1Q969H4 720 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 CCDC169A6NNP5 214 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 GSTA1P08263 222 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 GSTA2P09210 222 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 KRT222Q8N1A0 295 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 RNF10Q8N5U6 811 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 METTL13Q8N6R0 699 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 FNBP1Q96RU3 617 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 CTAGE9A4FU28 777 aa12.35□□□□□ -0.43
CACNA1C-208ENST00000399601 PI4KAP2A4QPH2 592 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms