RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 TTC28Q96AY4 2481 aa22.53■■□□□ 1.2
UFD1-202ENST00000399523 EYSQ5T1H1 3165 aa22.52■■□□□ 1.2
UFD1-202ENST00000399523 SPP2Q13103 211 aa22.52■■□□□ 1.2
UFD1-202ENST00000399523 PABPC4Q13310 644 aaKnown RBP eCLIP22.52■■□□□ 1.2
UFD1-202ENST00000399523 GUCD1Q96NT3 240 aa22.52■■□□□ 1.2
UFD1-202ENST00000399523 ASCC2Q9H1I8 757 aaPredicted RBP22.52■■□□□ 1.2
UFD1-202ENST00000399523 ATP2B3Q16720 1220 aa22.51■■□□□ 1.19
UFD1-202ENST00000399523 ZGPATQ8N5A5 531 aaKnown RBP22.51■■□□□ 1.19
UFD1-202ENST00000399523 ZNF280CQ8ND82 737 aa22.51■■□□□ 1.19
UFD1-202ENST00000399523 TBC1D2Q9BYX2 928 aa22.51■■□□□ 1.19
UFD1-202ENST00000399523 MORF4L1Q9UBU8 362 aa22.51■■□□□ 1.19
UFD1-202ENST00000399523 COL2A1P02458 1487 aaPredicted RBP22.51■■□□□ 1.19
UFD1-202ENST00000399523 PRUNE2Q8WUY3 3088 aa22.51■■□□□ 1.19
UFD1-202ENST00000399523 SPTBN5Q9NRC6 3674 aaKnown RBP22.5■■□□□ 1.19
UFD1-202ENST00000399523 XRCC5P13010 732 aaKnown RBP22.5■■□□□ 1.19
UFD1-202ENST00000399523 PRKAR2AP13861 404 aaKnown RBP22.5■■□□□ 1.19
UFD1-202ENST00000399523 OSBPL5Q9H0X9 879 aaPredicted RBP22.5■■□□□ 1.19
UFD1-202ENST00000399523 FBXO3Q9UK99 471 aa22.5■■□□□ 1.19
UFD1-202ENST00000399523 NPM3O75607 178 aaKnown RBP22.49■■□□□ 1.19
UFD1-202ENST00000399523 PHKA1P46020 1223 aa22.49■■□□□ 1.19
UFD1-202ENST00000399523 HMGCS2P54868 508 aa22.49■■□□□ 1.19
UFD1-202ENST00000399523 SLF2Q8IX21 1173 aa22.49■■□□□ 1.19
UFD1-202ENST00000399523 CIAO1O76071 339 aa22.48■■□□□ 1.19
UFD1-202ENST00000399523 CYP2B6P20813 491 aa22.48■■□□□ 1.19
UFD1-202ENST00000399523 MDM2Q00987 491 aaPredicted RBP22.48■■□□□ 1.19
UFD1-202ENST00000399523 PICALMQ13492 652 aa22.48■■□□□ 1.19
UFD1-202ENST00000399523 LRRC26Q2I0M4 334 aa22.48■■□□□ 1.19
UFD1-202ENST00000399523 SH3D19Q5HYK7 790 aa22.48■■□□□ 1.19
UFD1-202ENST00000399523 DZIP1Q86YF9 867 aaKnown RBP22.48■■□□□ 1.19
UFD1-202ENST00000399523 CEP126Q9P2H0 1117 aa22.48■■□□□ 1.19
UFD1-202ENST00000399523 BTDP43251 543 aa22.47■■□□□ 1.19
UFD1-202ENST00000399523 LHX8Q68G74 356 aa22.47■■□□□ 1.19
UFD1-202ENST00000399523 NUDT12Q9BQG2 462 aa22.47■■□□□ 1.19
UFD1-202ENST00000399523 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.47■■□□□ 1.19
UFD1-202ENST00000399523 RHBDL3P58872 404 aa22.46■■□□□ 1.19
UFD1-202ENST00000399523 TRMT44Q8IYL2 757 aaKnown RBP22.46■■□□□ 1.19
UFD1-202ENST00000399523 SOCS4Q8WXH5 440 aa22.46■■□□□ 1.19
UFD1-202ENST00000399523 PDS5AQ29RF7 1337 aaKnown RBP22.46■■□□□ 1.19
UFD1-202ENST00000399523 ATAD5Q96QE3 1844 aa22.45■■□□□ 1.19
UFD1-202ENST00000399523 GPR75-ASB3A0A0A6YYF3 556 aa22.45■■□□□ 1.18
UFD1-202ENST00000399523 FAM196BA6NMK8 535 aa22.45■■□□□ 1.18
UFD1-202ENST00000399523 CAP2P40123 477 aa22.45■■□□□ 1.18
UFD1-202ENST00000399523 CACNB2Q08289 660 aaPredicted RBP22.45■■□□□ 1.18
UFD1-202ENST00000399523 MRPL50Q8N5N7 158 aaKnown RBP22.45■■□□□ 1.18
UFD1-202ENST00000399523 MROH7-TTC4A0A0A0MT08 1334 aa22.45■■□□□ 1.18
UFD1-202ENST00000399523 PTPRCP08575 1304 aa22.45■■□□□ 1.18
UFD1-202ENST00000399523 USP17L5A8MUK1 530 aa22.44■■□□□ 1.18
UFD1-202ENST00000399523 RRP1BQ14684 758 aaKnown RBP22.44■■□□□ 1.18
UFD1-202ENST00000399523 SPTY2D1Q68D10 685 aaPredicted RBP22.44■■□□□ 1.18
UFD1-202ENST00000399523 CCDC102BQ68D86 513 aa22.44■■□□□ 1.18
UFD1-202ENST00000399523 USP6NLQ92738 828 aa22.44■■□□□ 1.18
UFD1-202ENST00000399523 SIL1Q9H173 461 aa22.44■■□□□ 1.18
UFD1-202ENST00000399523 ABCF2Q9UG63 623 aa22.44■■□□□ 1.18
UFD1-202ENST00000399523 HOXA7P31268 230 aaPredicted RBP22.43■■□□□ 1.18
UFD1-202ENST00000399523 RASGRF1Q13972 1273 aa22.43■■□□□ 1.18
UFD1-202ENST00000399523 GPRC5AQ8NFJ5 357 aa22.43■■□□□ 1.18
UFD1-202ENST00000399523 FAM161BQ96MY7 647 aa22.43■■□□□ 1.18
UFD1-202ENST00000399523 MAP4K4O95819 1239 aaPredicted RBP22.42■■□□□ 1.18
UFD1-202ENST00000399523 ZKSCAN1P17029 563 aaPredicted RBP22.42■■□□□ 1.18
UFD1-202ENST00000399523 CCND3P30281 292 aaPredicted RBP22.42■■□□□ 1.18
UFD1-202ENST00000399523 ADORA1P30542 326 aa22.42■■□□□ 1.18
UFD1-202ENST00000399523 IRX3P78415 501 aaPredicted RBP22.42■■□□□ 1.18
UFD1-202ENST00000399523 P2RX7Q99572 595 aaKnown RBP22.42■■□□□ 1.18
UFD1-202ENST00000399523 WDR18Q9BV38 432 aa22.42■■□□□ 1.18
UFD1-202ENST00000399523 TXNRD2Q9NNW7 524 aa22.42■■□□□ 1.18
UFD1-202ENST00000399523 MAPK4P31152 587 aa22.41■■□□□ 1.18
UFD1-202ENST00000399523 IL15P40933 162 aaPredicted RBP22.41■■□□□ 1.18
UFD1-202ENST00000399523 ZNF697Q5TEC3 545 aa22.41■■□□□ 1.18
UFD1-202ENST00000399523 ZNF384Q8TF68 577 aa22.41■■□□□ 1.18
UFD1-202ENST00000399523 LBHD1Q9BQE6 289 aaPredicted RBP22.41■■□□□ 1.18
UFD1-202ENST00000399523 AS3MTQ9HBK9 375 aa22.41■■□□□ 1.18
UFD1-202ENST00000399523 PRDM6Q9NQX0 595 aa22.41■■□□□ 1.18
UFD1-202ENST00000399523 PEX10O60683 326 aa22.4■■□□□ 1.18
UFD1-202ENST00000399523 BACE1P56817 501 aa22.4■■□□□ 1.18
UFD1-202ENST00000399523 HERVK_113P62684 666 aa22.4■■□□□ 1.18
UFD1-202ENST00000399523 MECOMQ03112 1051 aa22.4■■□□□ 1.18
UFD1-202ENST00000399523 PDE3AQ14432 1141 aa22.4■■□□□ 1.18
UFD1-202ENST00000399523 CDH23Q9H251 3354 aa22.4■■□□□ 1.18
UFD1-202ENST00000399523 RGS2P41220 211 aa22.39■■□□□ 1.17
UFD1-202ENST00000399523 CCL14Q16627 93 aa22.39■■□□□ 1.17
UFD1-202ENST00000399523 MORN1Q5T089 497 aa22.39■■□□□ 1.17
UFD1-202ENST00000399523 RBPJLQ9UBG7 517 aa22.39■■□□□ 1.17
UFD1-202ENST00000399523 HERC5Q9UII4 1024 aaKnown RBP22.39■■□□□ 1.17
UFD1-202ENST00000399523 MTMR2Q13614 643 aa22.38■■□□□ 1.17
UFD1-202ENST00000399523 ERICH6Q7L0X2 663 aa22.38■■□□□ 1.17
UFD1-202ENST00000399523 CDX2Q99626 313 aaPredicted RBP22.38■■□□□ 1.17
UFD1-202ENST00000399523 MRS2Q9HD23 443 aa22.38■■□□□ 1.17
UFD1-202ENST00000399523 TMOD4Q9NZQ9 345 aa22.38■■□□□ 1.17
UFD1-202ENST00000399523 FRMPD3Q5JV73 1810 aa22.38■■□□□ 1.17
UFD1-202ENST00000399523 MAST2Q6P0Q8 1798 aa22.38■■□□□ 1.17
UFD1-202ENST00000399523 Q3C1V9 767 aa22.37■■□□□ 1.17
UFD1-202ENST00000399523 GPR142Q7Z601 462 aa22.37■■□□□ 1.17
UFD1-202ENST00000399523 APBA2Q99767 749 aa22.37■■□□□ 1.17
UFD1-202ENST00000399523 SENP6Q9GZR1 1112 aaPredicted RBP22.37■■□□□ 1.17
UFD1-202ENST00000399523 PORCNQ9H237 461 aa22.37■■□□□ 1.17
UFD1-202ENST00000399523 MUC3AQ02505 3323 aa22.36■■□□□ 1.17
UFD1-202ENST00000399523 C19orf81C9J6K1 198 aa22.36■■□□□ 1.17
UFD1-202ENST00000399523 TIMM10P62072 90 aa22.36■■□□□ 1.17
UFD1-202ENST00000399523 ERVK-9P63128 1117 aa22.36■■□□□ 1.17
UFD1-202ENST00000399523 ERVK-24P63145 666 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms