RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 A0A1W2PQ27 194 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 A0A1W2PQ64 194 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 A0A1W2PQD8 194 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 SOWAHDA6NJG2 315 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 DNM1LO00429 736 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 SLC3A2P08195 630 aaKnown RBP12.48□□□□□ -0.41
ITSN1-207ENST00000399338 AMOTQ4VCS5 1084 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 TTMPQ5BVD1 217 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 NCAPH2Q6IBW4 605 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 CCNI2Q6ZMN8 369 aaPredicted RBP12.48□□□□□ -0.41
ITSN1-207ENST00000399338 PCDHA7Q9UN72 937 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 C15orf41Q9Y2V0 281 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 ZFYVE16Q7Z3T8 1539 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 A6NHS1 94 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 ZKSCAN1P17029 563 aaPredicted RBP12.47□□□□□ -0.41
ITSN1-207ENST00000399338 ME1P48163 572 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 CREB3L3Q68CJ9 461 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 ADALQ6DHV7 355 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 RAD9BQ6WBX8 426 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 STAMBPL1Q96FJ0 436 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 ALS2CR12Q96Q35 445 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 GGNBP2Q9H3C7 697 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 G3BP2Q9UN86 482 aaKnown RBP12.47□□□□□ -0.41
ITSN1-207ENST00000399338 U3KPZ7 1027 aaPredicted RBP12.47□□□□□ -0.41
ITSN1-207ENST00000399338 RIMS2Q9UQ26 1411 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 OPLAHO14841 1288 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 ATP6V1G2O95670 118 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 USP4Q13107 963 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 SPECC1LQ69YQ0 1117 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 FAM81AQ8TBF8 368 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 NUP133Q8WUM0 1156 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 CDC5LQ99459 802 aaKnown RBP12.47□□□□□ -0.41
ITSN1-207ENST00000399338 SLX1AQ9BQ83 275 aa12.47□□□□□ -0.41
ITSN1-207ENST00000399338 NBPF7P0C2Y1 421 aaPredicted RBP12.46□□□□□ -0.41
ITSN1-207ENST00000399338 FERP16591 822 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 PSMA5P28066 241 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 RANBP1P43487 201 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 SLMAPQ14BN4 828 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 EMC10Q5UCC4 262 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 MTHFD1LQ6UB35 978 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 RASGRP2Q7LDG7 609 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 AENQ8WTP8 325 aaKnown RBP12.46□□□□□ -0.41
ITSN1-207ENST00000399338 NOD2Q9HC29 1040 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 RIPOR2Q9Y4F9 1068 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 CD163L1Q9NR16 1453 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 KDM6AO15550 1401 aaPredicted RBP12.46□□□□□ -0.41
ITSN1-207ENST00000399338 MYO1EQ12965 1108 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 STK3Q13188 491 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 SETDB1Q15047 1291 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 CRELD2Q6UXH1 353 aaPredicted RBP12.46□□□□□ -0.41
ITSN1-207ENST00000399338 ATL2Q8NHH9 583 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 MYCBPAPQ8TBZ2 947 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 CUL5Q93034 780 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 PANX2Q96RD6 677 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 CCT8L2Q96SF2 557 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 OSBPL7Q9BZF2 842 aa12.46□□□□□ -0.41
ITSN1-207ENST00000399338 PAPOLBQ9NRJ5 636 aaKnown RBP12.46□□□□□ -0.41
ITSN1-207ENST00000399338 OPA1O60313 960 aa12.46□□□□□ -0.42
ITSN1-207ENST00000399338 CSB-PGBD3P0DP91 1061 aa12.46□□□□□ -0.42
ITSN1-207ENST00000399338 RPS6KB1P23443 525 aa12.46□□□□□ -0.42
ITSN1-207ENST00000399338 HDLBPQ00341 1268 aaKnown RBP12.46□□□□□ -0.42
ITSN1-207ENST00000399338 PTGISQ16647 500 aa12.46□□□□□ -0.42
ITSN1-207ENST00000399338 ANKRD20A8PQ5CZ79 823 aa12.46□□□□□ -0.42
ITSN1-207ENST00000399338 CCDC121Q6ZUS5 278 aa12.46□□□□□ -0.42
ITSN1-207ENST00000399338 ARHGAP22Q7Z5H3 698 aa12.46□□□□□ -0.42
ITSN1-207ENST00000399338 TAX1BP1Q86VP1 789 aa12.46□□□□□ -0.42
ITSN1-207ENST00000399338 GSPT2Q8IYD1 628 aaKnown RBP12.46□□□□□ -0.42
ITSN1-207ENST00000399338 ARL8AQ96BM9 186 aa12.46□□□□□ -0.42
ITSN1-207ENST00000399338 ZNF396Q96N95 335 aaPredicted RBP12.46□□□□□ -0.42
ITSN1-207ENST00000399338 ZNF570Q96NI8 536 aa12.46□□□□□ -0.42
ITSN1-207ENST00000399338 ZCCHC11Q5TAX3 1644 aaKnown RBP12.45□□□□□ -0.42
ITSN1-207ENST00000399338 BUB1BO60566 1050 aaPredicted RBP12.45□□□□□ -0.42
ITSN1-207ENST00000399338 RNF8O76064 485 aa12.45□□□□□ -0.42
ITSN1-207ENST00000399338 CCT4P50991 539 aaKnown RBP12.45□□□□□ -0.42
ITSN1-207ENST00000399338 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
ITSN1-207ENST00000399338 NLRP14Q86W24 1093 aa12.45□□□□□ -0.42
ITSN1-207ENST00000399338 ZFAND2BQ8WV99 257 aa12.45□□□□□ -0.42
ITSN1-207ENST00000399338 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
ITSN1-207ENST00000399338 HOOK1Q9UJC3 728 aaKnown RBP12.45□□□□□ -0.42
ITSN1-207ENST00000399338 CEMIPQ8WUJ3 1361 aa12.45□□□□□ -0.42
ITSN1-207ENST00000399338 SRRM3A6NNA2 597 aaPredicted RBP12.45□□□□□ -0.42
ITSN1-207ENST00000399338 BLMHQ13867 455 aa12.45□□□□□ -0.42
ITSN1-207ENST00000399338 KDM7AQ6ZMT4 941 aa12.45□□□□□ -0.42
ITSN1-207ENST00000399338 RUFY2Q8WXA3 655 aa12.45□□□□□ -0.42
ITSN1-207ENST00000399338 TCEANC2Q96MN5 208 aa12.45□□□□□ -0.42
ITSN1-207ENST00000399338 RBM8AQ9Y5S9 174 aaKnown RBP12.45□□□□□ -0.42
ITSN1-207ENST00000399338 FAM107AO95990 144 aa12.44□□□□□ -0.42
ITSN1-207ENST00000399338 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
ITSN1-207ENST00000399338 LACTB2Q53H82 288 aaPredicted RBP12.44□□□□□ -0.42
ITSN1-207ENST00000399338 TUBE1Q9UJT0 475 aa12.44□□□□□ -0.42
ITSN1-207ENST00000399338 MAP3K5Q99683 1374 aa12.44□□□□□ -0.42
ITSN1-207ENST00000399338 TULP4Q9NRJ4 1543 aa12.44□□□□□ -0.42
ITSN1-207ENST00000399338 ELF3P78545 371 aaPredicted RBP12.44□□□□□ -0.42
ITSN1-207ENST00000399338 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
ITSN1-207ENST00000399338 MYLK4Q86YV6 388 aaPredicted RBP12.44□□□□□ -0.42
ITSN1-207ENST00000399338 TBC1D31Q96DN5 1066 aa12.44□□□□□ -0.42
ITSN1-207ENST00000399338 NAA15Q9BXJ9 866 aaKnown RBP12.44□□□□□ -0.42
ITSN1-207ENST00000399338 GOPCQ9HD26 462 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms