RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 SUPT20HL1Q3ZLR7 823 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 MAP1SQ66K74 1059 aaPredicted RBP10.61□□□□□ -0.71
BRCC3-206ENST00000399042 CDC37L1Q7L3B6 337 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 FAM83AQ86UY5 434 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 IL25Q9H293 177 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 ZNF408Q9H9D4 720 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 MKNK2Q9HBH9 465 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 ZNF287Q9HBT7 754 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
BRCC3-206ENST00000399042 FAM198AQ9UFP1 575 aa10.61□□□□□ -0.71
BRCC3-206ENST00000399042 RBM8AQ9Y5S9 174 aaKnown RBP10.61□□□□□ -0.71
BRCC3-206ENST00000399042 POTECB2RU33 542 aa10.6□□□□□ -0.71
BRCC3-206ENST00000399042 PDE4BQ07343 736 aa10.6□□□□□ -0.71
BRCC3-206ENST00000399042 ALX1Q15699 326 aa10.6□□□□□ -0.71
BRCC3-206ENST00000399042 RRP12Q5JTH9 1297 aaKnown RBP10.6□□□□□ -0.71
BRCC3-206ENST00000399042 PRAMEF18Q5VWM3 479 aa10.6□□□□□ -0.71
BRCC3-206ENST00000399042 CTR9Q6PD62 1173 aa10.6□□□□□ -0.71
BRCC3-206ENST00000399042 ZFPM1Q8IX07 1006 aa10.6□□□□□ -0.71
BRCC3-206ENST00000399042 MAP4K1Q92918 833 aa10.6□□□□□ -0.71
BRCC3-206ENST00000399042 BACH2Q9BYV9 841 aa10.6□□□□□ -0.71
BRCC3-206ENST00000399042 LSG1Q9H089 658 aaKnown RBP10.6□□□□□ -0.71
BRCC3-206ENST00000399042 RNF41Q9H4P4 317 aaPredicted RBP10.6□□□□□ -0.71
BRCC3-206ENST00000399042 DDX4Q9NQI0 724 aaKnown RBP10.6□□□□□ -0.71
BRCC3-206ENST00000399042 PI4KBQ9UBF8 816 aa10.6□□□□□ -0.71
BRCC3-206ENST00000399042 PPP2R3BQ9Y5P8 575 aa10.6□□□□□ -0.71
BRCC3-206ENST00000399042 PITPNM2Q9BZ72 1349 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 CYP2D7A0A087X1C5 515 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 ADM5C9JUS6 153 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 CYP2D6P10635 497 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 CTDSPL2Q05D32 466 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 PPARAQ07869 468 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 PRKG1Q13976 671 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 DCAF15Q66K64 600 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 MFSD6Q6ZSS7 791 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 MIGA2Q7L4E1 593 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 RALYLQ86SE5 291 aaKnown RBP10.59□□□□□ -0.71
BRCC3-206ENST00000399042 ZNF444Q8N0Y2 327 aaPredicted RBP10.59□□□□□ -0.71
BRCC3-206ENST00000399042 USP26Q9BXU7 913 aa10.59□□□□□ -0.71
BRCC3-206ENST00000399042 GLIS2Q9BZE0 524 aaPredicted RBP10.59□□□□□ -0.71
BRCC3-206ENST00000399042 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.59□□□□□ -0.71
BRCC3-206ENST00000399042 EPB41L4AQ9HCS5 686 aaPredicted RBP10.59□□□□□ -0.71
BRCC3-206ENST00000399042 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
BRCC3-206ENST00000399042 MAST2Q6P0Q8 1798 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 DDTLA6NHG4 134 aaPredicted RBP10.58□□□□□ -0.72
BRCC3-206ENST00000399042 MPHOSPH10O00566 681 aaKnown RBP10.58□□□□□ -0.72
BRCC3-206ENST00000399042 PPP1R12BO60237 982 aaPredicted RBP10.58□□□□□ -0.72
BRCC3-206ENST00000399042 SEC24BO95487 1268 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 FGD1P98174 961 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 KRT32Q14532 448 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 C12orf60Q5U649 245 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 CREB3L3Q68CJ9 461 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 FOXP4Q8IVH2 680 aaPredicted RBP10.58□□□□□ -0.72
BRCC3-206ENST00000399042 C22orf23Q9BZE7 217 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 SERPINB13Q9UIV8 391 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 AK9Q5TCS8 1911 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 MYH2Q9UKX2 1941 aa10.58□□□□□ -0.72
BRCC3-206ENST00000399042 SLC27A2O14975 620 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 EPB41L2O43491 1005 aaKnown RBP10.57□□□□□ -0.72
BRCC3-206ENST00000399042 RANBP6O60518 1105 aaKnown RBP10.57□□□□□ -0.72
BRCC3-206ENST00000399042 PRDM1O75626 825 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 TIE1P35590 1138 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 PLCD1P51178 756 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 SBK1Q52WX2 424 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 NBPF12Q5TAG4 269 aaPredicted RBP10.57□□□□□ -0.72
BRCC3-206ENST00000399042 ZNF784Q8NCA9 323 aaPredicted RBP10.57□□□□□ -0.72
BRCC3-206ENST00000399042 SMC1BQ8NDV3 1235 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 CDCA5Q96FF9 252 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 DYNLL2Q96FJ2 89 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 CNNM2Q9H8M5 875 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 SWAP70Q9UH65 585 aa10.57□□□□□ -0.72
BRCC3-206ENST00000399042 PSME4Q14997 1843 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 CNTNAP1P78357 1384 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 RIOK3O14730 519 aaKnown RBP10.56□□□□□ -0.72
BRCC3-206ENST00000399042 PSMA5P28066 241 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 AKNAD1Q5T1N1 836 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 ARMC9Q7Z3E5 817 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 ZNF341Q9BYN7 854 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 KRT23Q9C075 422 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 CABP5Q9NP86 173 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 PGAP2Q9UHJ9 254 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 HERC5Q9UII4 1024 aaKnown RBP10.56□□□□□ -0.72
BRCC3-206ENST00000399042 ZMYM6O95789 1325 aa10.56□□□□□ -0.72
BRCC3-206ENST00000399042 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
BRCC3-206ENST00000399042 TSPY2A6NKD2 308 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 FAM196BA6NMK8 535 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 TRAF5O00463 557 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 TOMM70O94826 608 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 CELF2O95319 508 aaKnown RBP10.55□□□□□ -0.72
BRCC3-206ENST00000399042 CYP21A2P08686 494 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 TSPY3P0CV98 308 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 TSPY8P0CW00 308 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 HSPA4P34932 840 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 IREB2P48200 963 aaKnown RBP10.55□□□□□ -0.72
BRCC3-206ENST00000399042 CDK8P49336 464 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 NECTIN1Q15223 517 aa10.55□□□□□ -0.72
BRCC3-206ENST00000399042 CERKLQ49MI3 558 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms