RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 IFNLR1Q8IU57 520 aaPredicted RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 CCDC124Q96CT7 223 aaKnown RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 PPANQ9NQ55 473 aaKnown RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 EIF2AK4Q9P2K8 1649 aaKnown RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 KRT3P12035 628 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 DOLKQ9UPQ8 538 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 CALUO43852 315 aaPredicted RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 CYP7A1P22680 504 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 ASPHQ12797 758 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 C4orf50Q6ZRC1 276 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 MICALL1Q8N3F8 863 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 URGCPQ8TCY9 931 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 MAP3K20Q9NYL2 800 aaKnown RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 SLC13A4Q9UKG4 626 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 PCDHB8Q9UN66 801 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 PCDHB13Q9Y5F0 798 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 WDR64B1ANS9 1081 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 SLC10A4Q96EP9 437 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 NUP58Q9BVL2 599 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 FMNL1O95466 1100 aaPredicted RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 NAA30Q147X3 362 aaPredicted RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 LMBR1LQ6UX01 489 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 NOP9Q86U38 636 aaKnown RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 PNMA8AQ86V59 439 aaPredicted RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 FAM177A1Q8N128 213 aaPredicted RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 GIMAP8Q8ND71 665 aaPredicted RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 RAET1EQ8TD07 263 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 JAKMIP1Q96N16 626 aaKnown RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 BRD1O95696 1058 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 DNAJC21Q5F1R6 531 aaKnown RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 FAM160B1Q5W0V3 765 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 FTOQ9C0B1 505 aaKnown RBP eCLIP5.57□□□□□ -1.52
TTC3-204ENST00000399017 MMRN2Q9H8L6 949 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 KIF9Q9HAQ2 790 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 ZNF212Q9UDV6 495 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 PPME1Q9Y570 386 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 MYH3P11055 1940 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 PARP1P09874 1014 aaKnown RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 PYGBP11216 843 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 GSDMDP57764 484 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 PRKG1Q13976 671 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 ZNF713Q8N859 430 aaPredicted RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 MED10Q9BTT4 135 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 NUF2Q9BZD4 464 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 MTRF1LQ9UGC7 380 aaKnown RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 CNOT7Q9UIV1 285 aaKnown RBP5.57□□□□□ -1.52
TTC3-204ENST00000399017 NESP48681 1621 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 PDE4DQ08499 809 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 VWA3BQ502W6 1294 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 PDCL2Q8N4E4 241 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 ZKSCAN3Q9BRR0 538 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 JADE2Q9NQC1 790 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 LIMCH1Q9UPQ0 1083 aa5.57□□□□□ -1.52
TTC3-204ENST00000399017 ATXN8OSP0DMR3 200 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 ARHGAP25P42331 645 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 USP14P54578 494 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 TMC2Q8TDI7 906 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 FAM81BQ96LP2 452 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 DPP7Q9UHL4 492 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 TTLL3Q9Y4R7 772 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 NUB1Q9Y5A7 615 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 UBXN8O00124 270 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 KRT5P13647 590 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 ANXA13P27216 316 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 PHBP35232 272 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 SPAG1Q07617 926 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 SREBF2Q12772 1141 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 KCTD2Q14681 263 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 CC2D2BQ6DHV5 1058 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.56□□□□□ -1.528e-8■□□□□ 10.4
TTC3-204ENST00000399017 ZNF518AQ6AHZ1 1483 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 CA4P22748 312 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 APBA1Q02410 837 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 PPFIA1Q13136 1202 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 TFIP11Q9UBB9 837 aaKnown RBP5.56□□□□□ -1.52
TTC3-204ENST00000399017 NR2E3Q9Y5X4 410 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 AQRO60306 1485 aaKnown RBP eCLIP5.56□□□□□ -1.521e-7■■■■□ 25.7
TTC3-204ENST00000399017 CLGNO14967 610 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 TNNT1P13805 278 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 TCP11L2Q8N4U5 519 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 TRIM47Q96LD4 638 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 HYOU1Q9Y4L1 999 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 ARHGAP4P98171 946 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 RTN1Q16799 776 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 RRAGBQ5VZM2 374 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 ZBTB21Q9ULJ3 1066 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 MYH14Q7Z406 1995 aaKnown RBP5.56□□□□□ -1.52
TTC3-204ENST00000399017 PIK3R4Q99570 1358 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 SLC1A4P43007 532 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 ANKRD24Q8TF21 1146 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 BTG4Q9NY30 223 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 AKAP7Q9P0M2 348 aaPredicted RBP5.56□□□□□ -1.52
TTC3-204ENST00000399017 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.56□□□□□ -1.52
TTC3-204ENST00000399017 PHLPP2Q6ZVD8 1323 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 CCDC169A6NNP5 214 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 ZBTB43O43298 467 aa5.56□□□□□ -1.52
TTC3-204ENST00000399017 DALRD3Q5D0E6 543 aaKnown RBP5.56□□□□□ -1.52
TTC3-204ENST00000399017 DDX27Q96GQ7 796 aaKnown RBP5.56□□□□□ -1.52
TTC3-204ENST00000399017 STN1Q9H668 368 aaKnown RBP5.56□□□□□ -1.52
TTC3-204ENST00000399017 UTP6Q9NYH9 597 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms