RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 BAG1Q99933 345 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 H0YIN7 160 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 SASH1O94885 1247 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 RBM26Q5T8P6 1007 aaKnown RBP16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 CEP112Q8N8E3 955 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 FANCBQ8NB91 859 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 VPS54Q9P1Q0 977 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 ZMYM6O95789 1325 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 CD2BP2O95400 341 aaKnown RBP16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 CTNNBL1Q8WYA6 563 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 QRICH2Q9H0J4 1663 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 GOLGA6L7A0A1B0GV03 622 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 ERICH4A6NGS2 130 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 CYP27B1O15528 508 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 ALDH1B1P30837 517 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 GBP2P32456 591 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 TUBB4BP68371 445 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 PDE4DQ08499 809 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
PCDHGA11-201ENST00000398587 TULP4Q9NRJ4 1543 aa16.02■□□□□ 0.16
PCDHGA11-201ENST00000398587 ERVV-1B6SEH8 477 aa16.02■□□□□ 0.16
PCDHGA11-201ENST00000398587 RPL13P26373 211 aaKnown RBP16.02■□□□□ 0.16
PCDHGA11-201ENST00000398587 MTX1Q13505 466 aa16.02■□□□□ 0.16
PCDHGA11-201ENST00000398587 MFSD14BQ5SR56 506 aa16.02■□□□□ 0.16
PCDHGA11-201ENST00000398587 ARHGEF10LQ9HCE6 1279 aa16.02■□□□□ 0.16
PCDHGA11-201ENST00000398587 LAMC1P11047 1609 aa16.02■□□□□ 0.16
PCDHGA11-201ENST00000398587 B4DLN1 442 aa16.02■□□□□ 0.16
PCDHGA11-201ENST00000398587 FAM47AQ5JRC9 791 aa16.02■□□□□ 0.16
PCDHGA11-201ENST00000398587 CNNM4Q6P4Q7 775 aa16.02■□□□□ 0.16
PCDHGA11-201ENST00000398587 TNKSO95271 1327 aa16.02■□□□□ 0.15
PCDHGA11-201ENST00000398587 SLC1A4P43007 532 aa16.02■□□□□ 0.15
PCDHGA11-201ENST00000398587 POSTNQ15063 836 aa16.02■□□□□ 0.15
PCDHGA11-201ENST00000398587 ZNF589Q86UQ0 364 aaPredicted RBP16.02■□□□□ 0.15
PCDHGA11-201ENST00000398587 NOSTRINQ8IVI9 506 aa16.02■□□□□ 0.15
PCDHGA11-201ENST00000398587 ZSCAN10Q96SZ4 725 aaPredicted RBP16.02■□□□□ 0.15
PCDHGA11-201ENST00000398587 PLVAPQ9BX97 442 aa16.02■□□□□ 0.15
PCDHGA11-201ENST00000398587 CEP152O94986 1710 aa16.02■□□□□ 0.15
PCDHGA11-201ENST00000398587 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 CCNT1O60563 726 aaKnown RBP16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 PCP11498 1178 aaKnown RBP16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 ATP2B4P23634 1241 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 PI4K2BQ8TCG2 481 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 SDR42E1Q8WUS8 393 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 NFE2L3Q9Y4A8 694 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 CCT6AP40227 531 aaKnown RBP16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 TXKP42681 527 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 TBC1D8BQ0IIM8 1120 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 IGSF22Q8N9C0 903 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 FBXO18Q8NFZ0 1043 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 ADCY7P51828 1080 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 TRIM14Q14142 442 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 KARSQ15046 597 aaKnown RBP16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 USPL1Q5W0Q7 1092 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 HAUS3Q68CZ6 603 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 SYT10Q6XYQ8 523 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 LZTFL1Q9NQ48 299 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 IMPACTQ9P2X3 320 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 CTNND2Q9UQB3 1225 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 hCG_1642624A0A1W2PR95 340 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 TRAF5O00463 557 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 BRINP3Q76B58 766 aa16.01■□□□□ 0.15
PCDHGA11-201ENST00000398587 MED23Q9ULK4 1368 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 H7C1W4 665 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 SUPT20HQ8NEM7 779 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 DRC1Q96MC2 740 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 LRWD1Q9UFC0 647 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 SYNRGQ9UMZ2 1314 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 SCRN1Q12765 414 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 ZRSR2Q15696 482 aaKnown RBP16■□□□□ 0.15
PCDHGA11-201ENST00000398587 PIGBQ92521 554 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 ANTXR1Q9H6X2 564 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 GOPCQ9HD26 462 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 KIAA1468Q9P260 1216 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 SEMA3EO15041 775 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 GTF2IP78347 998 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
PCDHGA11-201ENST00000398587 PUF60Q9UHX1 559 aaKnown RBP16■□□□□ 0.15
PCDHGA11-201ENST00000398587 GUCA1BQ9UMX6 200 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 LRRIQ1Q96JM4 1722 aa16■□□□□ 0.15
PCDHGA11-201ENST00000398587 GOLGA6L10A0A0M3HER8 536 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 ANKRD62A6NC57 917 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 ARID5AQ03989 594 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 PAK1Q13153 545 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 CTR9Q6PD62 1173 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 GOLGA1Q92805 767 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 SELENOOQ9BVL4 669 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 CCDC113Q9H0I3 377 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 VPS16Q9H269 839 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 PRPHP41219 470 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 FCHSD1Q86WN1 690 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 REXO1Q8N1G1 1221 aaKnown RBP15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 DYDC1Q8WWB3 177 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 AXIN2Q9Y2T1 843 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 CTNNA2P26232 953 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 ZNF569Q5MCW4 686 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 KRT222Q8N1A0 295 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 LMBR1Q8WVP7 490 aa15.99■□□□□ 0.15
PCDHGA11-201ENST00000398587 NOC4LQ9BVI4 516 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms