RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 NPM3O75607 178 aaKnown RBP19.98■□□□□ 0.79
CUX2-202ENST00000397643 MNX1P50219 401 aaPredicted RBP19.98■□□□□ 0.79
CUX2-202ENST00000397643 TIMM10P62072 90 aa19.98■□□□□ 0.79
CUX2-202ENST00000397643 MECOMQ03112 1051 aa19.98■□□□□ 0.79
CUX2-202ENST00000397643 NECAB2Q7Z6G3 386 aa19.98■□□□□ 0.79
CUX2-202ENST00000397643 SLF2Q8IX21 1173 aa19.98■□□□□ 0.79
CUX2-202ENST00000397643 SLC17A8Q8NDX2 589 aa19.98■□□□□ 0.79
CUX2-202ENST00000397643 SMC4Q9NTJ3 1288 aa19.98■□□□□ 0.79
CUX2-202ENST00000397643 GJD2Q9UKL4 321 aa19.98■□□□□ 0.79
CUX2-202ENST00000397643 DLL1O00548 723 aa19.97■□□□□ 0.79
CUX2-202ENST00000397643 HMGCRP04035 888 aa19.97■□□□□ 0.79
CUX2-202ENST00000397643 TRIM32Q13049 653 aa19.97■□□□□ 0.79
CUX2-202ENST00000397643 SPP2Q13103 211 aa19.97■□□□□ 0.79
CUX2-202ENST00000397643 RRP1BQ14684 758 aaKnown RBP19.97■□□□□ 0.79
CUX2-202ENST00000397643 OSBPL5Q9H0X9 879 aaPredicted RBP19.97■□□□□ 0.79
CUX2-202ENST00000397643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.97■□□□□ 0.79
CUX2-202ENST00000397643 DDX60LQ5H9U9 1706 aaKnown RBP19.96■□□□□ 0.79
CUX2-202ENST00000397643 A0A1B0GUL7 405 aa19.96■□□□□ 0.79
CUX2-202ENST00000397643 BMP8BP34820 402 aa19.96■□□□□ 0.79
CUX2-202ENST00000397643 SPTY2D1Q68D10 685 aaPredicted RBP19.96■□□□□ 0.79
CUX2-202ENST00000397643 ANKLE1Q8NAG6 615 aa19.96■□□□□ 0.79
CUX2-202ENST00000397643 ZNF280CQ8ND82 737 aa19.96■□□□□ 0.79
CUX2-202ENST00000397643 XAGE2Q96GT9 111 aa19.96■□□□□ 0.79
CUX2-202ENST00000397643 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.96■□□□□ 0.79
CUX2-202ENST00000397643 SIPA1L1O43166 1804 aa19.96■□□□□ 0.79
CUX2-202ENST00000397643 GCLCP48506 637 aaPredicted RBP19.95■□□□□ 0.78
CUX2-202ENST00000397643 HMGCS2P54868 508 aa19.95■□□□□ 0.78
CUX2-202ENST00000397643 C7orf61Q8IZ16 206 aa19.95■□□□□ 0.78
CUX2-202ENST00000397643 MEIS3Q99687 375 aa19.95■□□□□ 0.78
CUX2-202ENST00000397643 ASCC2Q9H1I8 757 aaPredicted RBP19.95■□□□□ 0.78
CUX2-202ENST00000397643 SH3D19Q5HYK7 790 aa19.94■□□□□ 0.78
CUX2-202ENST00000397643 PI16Q6UXB8 463 aa19.94■□□□□ 0.78
CUX2-202ENST00000397643 ERICH6Q7L0X2 663 aa19.94■□□□□ 0.78
CUX2-202ENST00000397643 NSUN4Q96CB9 384 aaKnown RBP19.94■□□□□ 0.78
CUX2-202ENST00000397643 HMG20BQ9P0W2 317 aa19.94■□□□□ 0.78
CUX2-202ENST00000397643 ZMYND8Q9ULU4 1186 aaPredicted RBP19.94■□□□□ 0.78
CUX2-202ENST00000397643 RPTORQ8N122 1335 aa19.94■□□□□ 0.78
CUX2-202ENST00000397643 CAP2P40123 477 aa19.93■□□□□ 0.78
CUX2-202ENST00000397643 TFCP2Q12800 502 aa19.93■□□□□ 0.78
CUX2-202ENST00000397643 TRIB2Q92519 343 aa19.93■□□□□ 0.78
CUX2-202ENST00000397643 CDCA7LQ96GN5 454 aa19.93■□□□□ 0.78
CUX2-202ENST00000397643 TBC1D2Q9BYX2 928 aa19.93■□□□□ 0.78
CUX2-202ENST00000397643 MORF4L1Q9UBU8 362 aa19.93■□□□□ 0.78
CUX2-202ENST00000397643 NOB1Q9ULX3 412 aaKnown RBP19.93■□□□□ 0.78
CUX2-202ENST00000397643 MAP4K4O95819 1239 aaPredicted RBP19.92■□□□□ 0.78
CUX2-202ENST00000397643 MVPQ14764 893 aaKnown RBP19.92■□□□□ 0.78
CUX2-202ENST00000397643 MAP3K21Q5TCX8 1036 aa19.92■□□□□ 0.78
CUX2-202ENST00000397643 GPR153Q6NV75 609 aa19.92■□□□□ 0.78
CUX2-202ENST00000397643 TRMT2AQ8IZ69 625 aaKnown RBP19.92■□□□□ 0.78
CUX2-202ENST00000397643 NBPF3Q9H094 633 aa19.92■□□□□ 0.78
CUX2-202ENST00000397643 HMX1Q9NP08 348 aaPredicted RBP19.92■□□□□ 0.78
CUX2-202ENST00000397643 OGDHLQ9ULD0 1010 aa19.92■□□□□ 0.78
CUX2-202ENST00000397643 PABPC4Q13310 644 aaKnown RBP eCLIP19.91■□□□□ 0.78
CUX2-202ENST00000397643 TBC1D9Q6ZT07 1266 aa19.91■□□□□ 0.78
CUX2-202ENST00000397643 USP17L5A8MUK1 530 aa19.9■□□□□ 0.78
CUX2-202ENST00000397643 PEX10O60683 326 aa19.9■□□□□ 0.78
CUX2-202ENST00000397643 MTX1Q13505 466 aa19.9■□□□□ 0.78
CUX2-202ENST00000397643 SPATA5Q8NB90 893 aa19.9■□□□□ 0.78
CUX2-202ENST00000397643 C11orf49Q9H6J7 331 aa19.9■□□□□ 0.78
CUX2-202ENST00000397643 HDAC5Q9UQL6 1122 aa19.9■□□□□ 0.78
CUX2-202ENST00000397643 AKAP2Q9Y2D5 859 aa19.9■□□□□ 0.78
CUX2-202ENST00000397643 PFASO15067 1338 aa19.9■□□□□ 0.78
CUX2-202ENST00000397643 SRGAP3O43295 1099 aa19.89■□□□□ 0.77
CUX2-202ENST00000397643 SYN1P17600 705 aa19.89■□□□□ 0.77
CUX2-202ENST00000397643 ARID4AP29374 1257 aaPredicted RBP19.89■□□□□ 0.77
CUX2-202ENST00000397643 MAGEA10P43363 369 aaPredicted RBP19.89■□□□□ 0.77
CUX2-202ENST00000397643 GSTO1P78417 241 aa19.89■□□□□ 0.77
CUX2-202ENST00000397643 JAG1P78504 1218 aa19.89■□□□□ 0.77
CUX2-202ENST00000397643 LRIT3Q3SXY7 679 aa19.89■□□□□ 0.77
CUX2-202ENST00000397643 WDR18Q9BV38 432 aa19.89■□□□□ 0.77
CUX2-202ENST00000397643 API5Q9BZZ5 524 aaKnown RBP19.89■□□□□ 0.77
CUX2-202ENST00000397643 TXNRD2Q9NNW7 524 aa19.89■□□□□ 0.77
CUX2-202ENST00000397643 HERC5Q9UII4 1024 aaKnown RBP19.89■□□□□ 0.77
CUX2-202ENST00000397643 LDHCP07864 332 aa19.88■□□□□ 0.77
CUX2-202ENST00000397643 MTMR2Q13614 643 aa19.88■□□□□ 0.77
CUX2-202ENST00000397643 Q7L0L9 218 aa19.88■□□□□ 0.77
CUX2-202ENST00000397643 TEX11Q8IYF3 940 aa19.88■□□□□ 0.77
CUX2-202ENST00000397643 DNAJC18Q9H819 358 aa19.88■□□□□ 0.77
CUX2-202ENST00000397643 PRKAR2AP13861 404 aaKnown RBP19.87■□□□□ 0.77
CUX2-202ENST00000397643 CYP2B6P20813 491 aa19.87■□□□□ 0.77
CUX2-202ENST00000397643 HOXA7P31268 230 aaPredicted RBP19.87■□□□□ 0.77
CUX2-202ENST00000397643 MCAMP43121 646 aa19.87■□□□□ 0.77
CUX2-202ENST00000397643 BACE1P56817 501 aa19.87■□□□□ 0.77
CUX2-202ENST00000397643 SHROOM1Q2M3G4 852 aaPredicted RBP19.87■□□□□ 0.77
CUX2-202ENST00000397643 DEFB123Q8N688 67 aa19.87■□□□□ 0.77
CUX2-202ENST00000397643 SH3RF3Q8TEJ3 882 aaPredicted RBP19.87■□□□□ 0.77
CUX2-202ENST00000397643 P2RX7Q99572 595 aaKnown RBP19.87■□□□□ 0.77
CUX2-202ENST00000397643 AS3MTQ9HBK9 375 aa19.87■□□□□ 0.77
CUX2-202ENST00000397643 RAI14Q9P0K7 980 aa19.87■□□□□ 0.77
CUX2-202ENST00000397643 CDK5RAP2Q96SN8 1893 aa19.87■□□□□ 0.77
CUX2-202ENST00000397643 MAST2Q6P0Q8 1798 aa19.87■□□□□ 0.77
CUX2-202ENST00000397643 CT47B1P0C2W7 299 aaPredicted RBP19.86■□□□□ 0.77
CUX2-202ENST00000397643 COL6A1P12109 1028 aa19.86■□□□□ 0.77
CUX2-202ENST00000397643 XRCC5P13010 732 aaKnown RBP19.86■□□□□ 0.77
CUX2-202ENST00000397643 POTEEQ6S8J3 1075 aa19.86■□□□□ 0.77
CUX2-202ENST00000397643 METTL16Q86W50 562 aaKnown RBP19.86■□□□□ 0.77
CUX2-202ENST00000397643 TDHQ8IZJ6 230 aa19.86■□□□□ 0.77
CUX2-202ENST00000397643 USP6NLQ92738 828 aa19.86■□□□□ 0.77
CUX2-202ENST00000397643 NEUROD6Q96NK8 337 aa19.86■□□□□ 0.77
CUX2-202ENST00000397643 PI4KBQ9UBF8 816 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms