RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SALL1Q9NSC2 1324 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 MROH7-TTC4A0A0A0MT08 1334 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 ZNF335Q9H4Z2 1342 aaPredicted RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 CCDC196A0A1B0GTZ2 297 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 MINDY4BA8MYZ0 360 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 STARD3NLO95772 234 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 GUCY1A2P33402 732 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 ZNF827Q17R98 1081 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 ADALQ6DHV7 355 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 NLRP10Q86W26 655 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 ZBTB38Q8NAP3 1195 aaPredicted RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 ISCA1Q9BUE6 129 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 SRRTQ9BXP5 876 aaKnown RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 KIAA1468Q9P260 1216 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 ADAM21Q9UKJ8 722 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 BAZ2BQ9UIF8 2168 aaKnown RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 IFIT3O14879 490 aaKnown RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 COBLO75128 1261 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 PRDM1O75626 825 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 MBD4O95243 580 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 CALRP27797 417 aaKnown RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 BCAMP50895 628 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 GRIN1Q05586 938 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 GRIPAP1Q4V328 841 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 CCDC93Q567U6 631 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 TMEM67Q5HYA8 995 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 ANO1Q5XXA6 986 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 KRT40Q6A162 431 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 BICDL1Q6ZP65 573 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 DZIP3Q86Y13 1208 aaKnown RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 REXO1L1PQ8IX06 675 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 GRAMD1CQ8IYS0 662 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 SDR42E1Q8WUS8 393 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 MRFAP1L1Q96HT8 127 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 AGXT2Q9BYV1 514 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.74□□□□□ -1.49
SSR1-202ENST00000397511 NAPBQ9H115 298 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 MKRN1Q9UHC7 482 aaKnown RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 RIPOR2Q9Y4F9 1068 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 BTBD18B2RXH4 712 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 NRDCO43847 1150 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 CIAO1O76071 339 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 SEC31AO94979 1220 aaKnown RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 PDE8BO95263 885 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 SYKP43405 635 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 CTSWP56202 376 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 KIF23Q02241 960 aaPredicted RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 RPAINQ86UA6 219 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 MPHOSPH8Q99549 860 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 NAT10Q9H0A0 1025 aaKnown RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 GPR108Q9NPR9 543 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 ZSWIM5Q9P217 1185 aa5.74□□□□□ -1.49
SSR1-202ENST00000397511 ANGEL1Q9UNK9 670 aaKnown RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 PHRF1Q9P1Y6 1649 aaKnown RBP5.74□□□□□ -1.49
SSR1-202ENST00000397511 MRC1P22897 1456 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 GOLGA8AA7E2F4 631 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 ZBTB43O43298 467 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 ADAMTS2O95450 1211 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 TBC1D8O95759 1140 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 SERPINC1P01008 464 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 PCCAP05165 728 aaPredicted RBP5.73□□□□□ -1.49
SSR1-202ENST00000397511 PDE6AP16499 860 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 ADD2P35612 726 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 IARSP41252 1262 aaKnown RBP5.73□□□□□ -1.49
SSR1-202ENST00000397511 CORO7P57737 925 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 GSDMDP57764 484 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 NR5A1Q13285 461 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 CFAP100Q494V2 611 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 APOA5Q6Q788 366 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 SARM1Q6SZW1 724 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 GIGYF2Q6Y7W6 1299 aaKnown RBP5.73□□□□□ -1.49
SSR1-202ENST00000397511 NBPF11Q86T75 865 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 EFCAB13Q8IY85 973 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 DPF2Q92785 391 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 CCDC34Q96HJ3 373 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 ARFGAP3Q9NP61 516 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 RTEL1Q9NZ71 1219 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 MYO5AQ9Y4I1 1855 aaKnown RBP5.73□□□□□ -1.49
SSR1-202ENST00000397511 DCCP43146 1447 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 KIF1AQ12756 1690 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 MAP3K15Q6ZN16 1313 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 UBN2Q6ZU65 1347 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 CYP2D7A0A087X1C5 515 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 EFCAB8A8MWE9 144 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 RANBP6O60518 1105 aaKnown RBP5.73□□□□□ -1.49
SSR1-202ENST00000397511 RPS6KA5O75582 802 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 CPP00450 1065 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 CASP1P29466 404 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 USP8P40818 1118 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 CCZ1BP86790 482 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 CCZ1P86791 482 aaPredicted RBP5.73□□□□□ -1.49
SSR1-202ENST00000397511 RASGRF1Q13972 1273 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 TRIM29Q14134 588 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 LRRFIP1Q32MZ4 808 aaKnown RBP5.73□□□□□ -1.49
SSR1-202ENST00000397511 LONRF3Q496Y0 759 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 HOMER1Q86YM7 354 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 TRMT44Q8IYL2 757 aaKnown RBP5.73□□□□□ -1.49
SSR1-202ENST00000397511 LRRN4CLQ8ND94 238 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 LRP2BPQ9P2M1 347 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 SLC12A7Q9Y666 1083 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms