RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 TAF6LQ9Y6J9 622 aa27.87■■■□□ 2.05
TSPAN4-202ENST00000397396 WDR19Q8NEZ3 1342 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 CYP2D7A0A087X1C5 515 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 CYP2D6P10635 497 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 EPHX2P34913 555 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 NEK4P51957 841 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 C16orf86Q6ZW13 317 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 ESR2Q92731 530 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 TRIM34Q9BYJ4 488 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 TOMM22Q9NS69 142 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 SERPINB13Q9UIV8 391 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 PPP2R3BQ9Y5P8 575 aa27.86■■■□□ 2.05
TSPAN4-202ENST00000397396 RPS6KB1P23443 525 aa27.85■■■□□ 2.05
TSPAN4-202ENST00000397396 MCM5P33992 734 aa27.85■■■□□ 2.05
TSPAN4-202ENST00000397396 PLCD1P51178 756 aa27.85■■■□□ 2.05
TSPAN4-202ENST00000397396 DHX32Q7L7V1 743 aaKnown RBP27.85■■■□□ 2.05
TSPAN4-202ENST00000397396 PNMA8AQ86V59 439 aaPredicted RBP27.85■■■□□ 2.05
TSPAN4-202ENST00000397396 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.85■■■□□ 2.05
TSPAN4-202ENST00000397396 CNTNAP1P78357 1384 aa27.84■■■□□ 2.05
TSPAN4-202ENST00000397396 MCM2P49736 904 aa27.84■■■□□ 2.05
TSPAN4-202ENST00000397396 FOXP4Q8IVH2 680 aaPredicted RBP27.84■■■□□ 2.05
TSPAN4-202ENST00000397396 ZC3H15Q8WU90 426 aaKnown RBP27.84■■■□□ 2.05
TSPAN4-202ENST00000397396 MTA3Q9BTC8 594 aa27.84■■■□□ 2.05
TSPAN4-202ENST00000397396 UPF3BQ9BZI7 483 aaKnown RBP27.84■■■□□ 2.05
TSPAN4-202ENST00000397396 MKNK2Q9HBH9 465 aa27.84■■■□□ 2.05
TSPAN4-202ENST00000397396 NEDD4P46934 1319 aa27.83■■■□□ 2.05
TSPAN4-202ENST00000397396 ANKRD1Q15327 319 aa27.83■■■□□ 2.05
TSPAN4-202ENST00000397396 MB21D2Q8IYB1 491 aaPredicted RBP27.83■■■□□ 2.05
TSPAN4-202ENST00000397396 CRACR2BQ8N4Y2 399 aaPredicted RBP27.83■■■□□ 2.05
TSPAN4-202ENST00000397396 HOOK2Q96ED9 719 aa27.83■■■□□ 2.05
TSPAN4-202ENST00000397396 CSRNP1Q96S65 589 aa27.83■■■□□ 2.05
TSPAN4-202ENST00000397396 PDRG1Q9NUG6 133 aa27.83■■■□□ 2.05
TSPAN4-202ENST00000397396 GGA3Q9NZ52 723 aa27.83■■■□□ 2.05
TSPAN4-202ENST00000397396 GABPAQ06546 454 aa27.82■■■□□ 2.04
TSPAN4-202ENST00000397396 SLC4A8Q2Y0W8 1093 aa27.82■■■□□ 2.04
TSPAN4-202ENST00000397396 ANGEL2Q5VTE6 544 aaKnown RBP27.82■■■□□ 2.04
TSPAN4-202ENST00000397396 HERC5Q9UII4 1024 aaKnown RBP27.82■■■□□ 2.04
TSPAN4-202ENST00000397396 UTRNP46939 3433 aa27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 DDTLA6NHG4 134 aaPredicted RBP27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 HIRAP54198 1017 aaPredicted RBP27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 BECN1Q14457 450 aa27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 RASA3Q14644 834 aa27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 SART3Q15020 963 aaKnown RBP27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 RRP12Q5JTH9 1297 aaKnown RBP27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 ZFPM1Q8IX07 1006 aa27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 SNX21Q969T3 373 aa27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 ALDH8A1Q9H2A2 487 aaPredicted RBP27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 TAF1DQ9H5J8 278 aaPredicted RBP27.81■■■□□ 2.04
TSPAN4-202ENST00000397396 B4E1Z4 1266 aa27.8■■■□□ 2.04
TSPAN4-202ENST00000397396 CDK8P49336 464 aa27.8■■■□□ 2.04
TSPAN4-202ENST00000397396 SH3BP5LQ7L8J4 393 aa27.8■■■□□ 2.04
TSPAN4-202ENST00000397396 METTL16Q86W50 562 aaKnown RBP27.8■■■□□ 2.04
TSPAN4-202ENST00000397396 ZNF444Q8N0Y2 327 aaPredicted RBP27.8■■■□□ 2.04
TSPAN4-202ENST00000397396 DCPSQ96C86 337 aaKnown RBP27.8■■■□□ 2.04
TSPAN4-202ENST00000397396 KDM4AO75164 1064 aa27.79■■■□□ 2.04
TSPAN4-202ENST00000397396 FGD1P98174 961 aa27.79■■■□□ 2.04
TSPAN4-202ENST00000397396 IQCA1Q86XH1 822 aa27.79■■■□□ 2.04
TSPAN4-202ENST00000397396 HSCBQ8IWL3 235 aa27.79■■■□□ 2.04
TSPAN4-202ENST00000397396 STK11IPQ8N1F8 1099 aa27.79■■■□□ 2.04
TSPAN4-202ENST00000397396 DYNLL2Q96FJ2 89 aa27.79■■■□□ 2.04
TSPAN4-202ENST00000397396 TMEM87BQ96K49 555 aa27.79■■■□□ 2.04
TSPAN4-202ENST00000397396 DEFB129Q9H1M3 183 aa27.79■■■□□ 2.04
TSPAN4-202ENST00000397396 PRC1O43663 620 aa27.78■■■□□ 2.04
TSPAN4-202ENST00000397396 RANBP6O60518 1105 aaKnown RBP27.78■■■□□ 2.04
TSPAN4-202ENST00000397396 CCDC178Q5BJE1 867 aa27.78■■■□□ 2.04
TSPAN4-202ENST00000397396 FBXL16Q8N461 479 aa27.78■■■□□ 2.04
TSPAN4-202ENST00000397396 TTC14Q96N46 770 aa27.78■■■□□ 2.04
TSPAN4-202ENST00000397396 TMEM39BQ9GZU3 492 aa27.78■■■□□ 2.04
TSPAN4-202ENST00000397396 ERICH2A1L162 156 aa27.77■■■□□ 2.04
TSPAN4-202ENST00000397396 TSPY2A6NKD2 308 aa27.77■■■□□ 2.04
TSPAN4-202ENST00000397396 TBC1D12O60347 775 aa27.77■■■□□ 2.04
TSPAN4-202ENST00000397396 VEGFAP15692 232 aaPredicted RBP27.77■■■□□ 2.04
TSPAN4-202ENST00000397396 EXOSC10Q01780 885 aaKnown RBP27.77■■■□□ 2.04
TSPAN4-202ENST00000397396 CCDC17Q96LX7 622 aa27.77■■■□□ 2.04
TSPAN4-202ENST00000397396 ASTN2O75129 1339 aaPredicted RBP27.77■■■□□ 2.04
TSPAN4-202ENST00000397396 PRDM1O75626 825 aa27.76■■■□□ 2.03
TSPAN4-202ENST00000397396 EVX2Q03828 476 aa27.76■■■□□ 2.03
TSPAN4-202ENST00000397396 SULF1Q8IWU6 871 aa27.76■■■□□ 2.03
TSPAN4-202ENST00000397396 UBAC1Q9BSL1 405 aa27.76■■■□□ 2.03
TSPAN4-202ENST00000397396 TACC3Q9Y6A5 838 aa27.76■■■□□ 2.03
TSPAN4-202ENST00000397396 CPA1P15085 419 aa27.75■■■□□ 2.03
TSPAN4-202ENST00000397396 PPP4R3BQ5MIZ7 849 aa27.75■■■□□ 2.03
TSPAN4-202ENST00000397396 ZSWIM5Q9P217 1185 aa27.75■■■□□ 2.03
TSPAN4-202ENST00000397396 PGAP2Q9UHJ9 254 aa27.75■■■□□ 2.03
TSPAN4-202ENST00000397396 SIPA1L1O43166 1804 aa27.74■■■□□ 2.03
TSPAN4-202ENST00000397396 SMIM22K7EJ46 135 aa27.74■■■□□ 2.03
TSPAN4-202ENST00000397396 TSPY3P0CV98 308 aa27.74■■■□□ 2.03
TSPAN4-202ENST00000397396 TSPY8P0CW00 308 aa27.74■■■□□ 2.03
TSPAN4-202ENST00000397396 RASA1P20936 1047 aa27.74■■■□□ 2.03
TSPAN4-202ENST00000397396 SLC44A5Q8NCS7 719 aa27.74■■■□□ 2.03
TSPAN4-202ENST00000397396 AGXT2Q9BYV1 514 aa27.74■■■□□ 2.03
TSPAN4-202ENST00000397396 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.74■■■□□ 2.031e-7■■■■■ 39.7
TSPAN4-202ENST00000397396 INCENPQ9NQS7 918 aa27.74■■■□□ 2.03
TSPAN4-202ENST00000397396 PLIN4Q96Q06 1357 aa27.74■■■□□ 2.03
TSPAN4-202ENST00000397396 POTECB2RU33 542 aa27.73■■■□□ 2.03
TSPAN4-202ENST00000397396 EAPPQ56P03 285 aaPredicted RBP27.73■■■□□ 2.03
TSPAN4-202ENST00000397396 DCAF15Q66K64 600 aa27.73■■■□□ 2.03
TSPAN4-202ENST00000397396 TEPSINQ96N21 525 aa27.73■■■□□ 2.03
TSPAN4-202ENST00000397396 SHMT1P34896 483 aa27.72■■■□□ 2.03
TSPAN4-202ENST00000397396 AK2P54819 239 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms