RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 FGAP02671 866 aa12.74□□□□□ -0.37
NUP98-205ENST00000397007 SIAH1Q8IUQ4 282 aa12.74□□□□□ -0.37
NUP98-205ENST00000397007 FBXL16Q8N461 479 aa12.74□□□□□ -0.37
NUP98-205ENST00000397007 TGFBRAP1Q8WUH2 860 aa12.74□□□□□ -0.37
NUP98-205ENST00000397007 HERC5Q9UII4 1024 aaKnown RBP12.74□□□□□ -0.37
NUP98-205ENST00000397007 COL9A3Q14050 684 aaPredicted RBP12.73□□□□□ -0.37
NUP98-205ENST00000397007 STAG1Q8WVM7 1258 aa12.73□□□□□ -0.37
NUP98-205ENST00000397007 CRNKL1Q9BZJ0 848 aaKnown RBP12.73□□□□□ -0.37
NUP98-205ENST00000397007 NID2Q14112 1375 aa12.73□□□□□ -0.37
NUP98-205ENST00000397007 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
NUP98-205ENST00000397007 ORC4O43929 436 aa12.73□□□□□ -0.37
NUP98-205ENST00000397007 SLURP2P0DP57 97 aa12.73□□□□□ -0.37
NUP98-205ENST00000397007 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.73□□□□□ -0.37
NUP98-205ENST00000397007 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
NUP98-205ENST00000397007 TESPA1A2RU30 521 aaPredicted RBP12.73□□□□□ -0.37
NUP98-205ENST00000397007 KRT26Q7Z3Y9 468 aa12.73□□□□□ -0.37
NUP98-205ENST00000397007 GINM1Q9NU53 330 aa12.73□□□□□ -0.37
NUP98-205ENST00000397007 SNCAIPQ9Y6H5 919 aa12.73□□□□□ -0.37
NUP98-205ENST00000397007 CYP2D6P10635 497 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 CWC27Q6UX04 472 aaKnown RBP12.72□□□□□ -0.37
NUP98-205ENST00000397007 STOX1Q6ZVD7 989 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 RILPL2Q969X0 211 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 KIF2CQ99661 725 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 MYO1BO43795 1136 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 SEC24BO95487 1268 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 SAPCD2Q86UD0 394 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 TBC1D10CQ8IV04 446 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 DCPSQ96C86 337 aaKnown RBP12.72□□□□□ -0.37
NUP98-205ENST00000397007 USP26Q9BXU7 913 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 SLC4A4Q9Y6R1 1079 aa12.72□□□□□ -0.37
NUP98-205ENST00000397007 TCP10L2B9ZVM9 353 aa12.71□□□□□ -0.37
NUP98-205ENST00000397007 HSPA4P34932 840 aa12.71□□□□□ -0.37
NUP98-205ENST00000397007 FOXP4Q8IVH2 680 aaPredicted RBP12.71□□□□□ -0.37
NUP98-205ENST00000397007 MAPKAPK5Q8IW41 473 aa12.71□□□□□ -0.37
NUP98-205ENST00000397007 AIDAQ96BJ3 306 aa12.71□□□□□ -0.37
NUP98-205ENST00000397007 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.37
NUP98-205ENST00000397007 PI4KBQ9UBF8 816 aa12.71□□□□□ -0.37
NUP98-205ENST00000397007 SCAF8Q9UPN6 1271 aaKnown RBP12.71□□□□□ -0.37
NUP98-205ENST00000397007 PCP11498 1178 aaKnown RBP12.71□□□□□ -0.38
NUP98-205ENST00000397007 GJA5P36382 358 aa12.71□□□□□ -0.38
NUP98-205ENST00000397007 TRIM6-TRIM34B2RNG4 842 aa12.7□□□□□ -0.38
NUP98-205ENST00000397007 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
NUP98-205ENST00000397007 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
NUP98-205ENST00000397007 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
NUP98-205ENST00000397007 CYP21A2P08686 494 aa12.7□□□□□ -0.38
NUP98-205ENST00000397007 RASA1P20936 1047 aa12.7□□□□□ -0.38
NUP98-205ENST00000397007 SYNPO2Q9UMS6 1093 aa12.7□□□□□ -0.38
NUP98-205ENST00000397007 ZSWIM8A7E2V4 1837 aa12.7□□□□□ -0.38
NUP98-205ENST00000397007 TNNI2P48788 182 aa12.7□□□□□ -0.38
NUP98-205ENST00000397007 AGXT2Q9BYV1 514 aa12.7□□□□□ -0.38
NUP98-205ENST00000397007 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
NUP98-205ENST00000397007 ZNF526Q8TF50 670 aaPredicted RBP12.69□□□□□ -0.38
NUP98-205ENST00000397007 SWAP70Q9UH65 585 aa12.69□□□□□ -0.38
NUP98-205ENST00000397007 KCNH4Q9UQ05 1017 aa12.69□□□□□ -0.38
NUP98-205ENST00000397007 CYP2D7A0A087X1C5 515 aa12.69□□□□□ -0.38
NUP98-205ENST00000397007 APLP1P51693 650 aa12.69□□□□□ -0.38
NUP98-205ENST00000397007 PPARAQ07869 468 aa12.69□□□□□ -0.38
NUP98-205ENST00000397007 SHROOM1Q2M3G4 852 aaPredicted RBP12.69□□□□□ -0.38
NUP98-205ENST00000397007 WDR19Q8NEZ3 1342 aa12.69□□□□□ -0.38
NUP98-205ENST00000397007 MFAP1P55081 439 aaKnown RBP12.69□□□□□ -0.38
NUP98-205ENST00000397007 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
NUP98-205ENST00000397007 NEDD4P46934 1319 aa12.69□□□□□ -0.38
NUP98-205ENST00000397007 CEP350Q5VT06 3117 aa12.69□□□□□ -0.38
NUP98-205ENST00000397007 USP17L12C9JPN9 530 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 USP17L21D6R901 530 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 ADGRA2Q96PE1 1338 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 PCNTO95613 3336 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 CAP2P40123 477 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 EAPPQ56P03 285 aaPredicted RBP12.68□□□□□ -0.38
NUP98-205ENST00000397007 SH3D19Q5HYK7 790 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 SULF1Q8IWU6 871 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 IL17RBQ9NRM6 502 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 CTNND1O60716 968 aaKnown RBP12.68□□□□□ -0.38
NUP98-205ENST00000397007 MB21D2Q8IYB1 491 aaPredicted RBP12.68□□□□□ -0.38
NUP98-205ENST00000397007 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 CFHR5Q9BXR6 569 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 DIAPH3Q9NSV4 1193 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 SERPINB13Q9UIV8 391 aa12.68□□□□□ -0.38
NUP98-205ENST00000397007 RBM25P49756 843 aaKnown RBP12.67□□□□□ -0.38
NUP98-205ENST00000397007 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 RUFY2Q8WXA3 655 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 MKL1Q969V6 931 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 CSRNP1Q96S65 589 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 WDR18Q9BV38 432 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 AFG3L2Q9Y4W6 797 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 SPDYE5A6NIY4 337 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 SLC10A3P09131 477 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 CDK8P49336 464 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 PRAMEF18Q5VWM3 479 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 RASAL3Q86YV0 1011 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 ZNF341Q9BYN7 854 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 ALDH8A1Q9H2A2 487 aaPredicted RBP12.67□□□□□ -0.38
NUP98-205ENST00000397007 SLC27A2O14975 620 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 RBM5P52756 815 aaKnown RBP eCLIP12.67□□□□□ -0.38
NUP98-205ENST00000397007 ANTXR2P58335 489 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 C1QTNF8P60827 252 aa12.67□□□□□ -0.38
NUP98-205ENST00000397007 EXOSC10Q01780 885 aaKnown RBP12.67□□□□□ -0.38
NUP98-205ENST00000397007 SUPT20HL1Q3ZLR7 823 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms