RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 TBC1D10CQ8IV04 446 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 TM6SF1Q9BZW5 370 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 HACL1Q9UJ83 578 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 CNTNAP1P78357 1384 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 E7EWF7 191 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 CYP2D6P10635 497 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 HIRAP54198 1017 aaPredicted RBP17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 ADCK5Q3MIX3 580 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 STAG1Q8WVM7 1258 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 DHX36Q9H2U1 1008 aaKnown RBP17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 VEZTQ9HBM0 779 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 SAP30BPQ9UHR5 308 aaKnown RBP17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 POLR2AP24928 1970 aaKnown RBP17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 IQCA1LA6NCM1 817 aa17.5■□□□□ 0.39
TM9SF1-202ENST00000396854 POLR3DP05423 398 aaPredicted RBP17.5■□□□□ 0.39
TM9SF1-202ENST00000396854 FGRP09769 529 aa17.5■□□□□ 0.39
TM9SF1-202ENST00000396854 PCP11498 1178 aaKnown RBP17.5■□□□□ 0.39
TM9SF1-202ENST00000396854 CTDSPL2Q05D32 466 aa17.5■□□□□ 0.39
TM9SF1-202ENST00000396854 AKNAD1Q5T1N1 836 aa17.5■□□□□ 0.39
TM9SF1-202ENST00000396854 ZFPM1Q8IX07 1006 aa17.5■□□□□ 0.39
TM9SF1-202ENST00000396854 TCP10L2B9ZVM9 353 aa17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 PLCD1P51178 756 aa17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 TCP10Q12799 353 aa17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 TNFAIP1Q13829 316 aa17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 TTC6Q86TZ1 520 aa17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 FAM151AQ8WW52 585 aa17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 RNF41Q9H4P4 317 aaPredicted RBP17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 SMIM22K7EJ46 135 aa17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 SLC3A2P08195 630 aaKnown RBP17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 PSMA5P28066 241 aa17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 EVX2Q03828 476 aa17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 KLHL40Q2TBA0 621 aa17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 USP50Q70EL3 339 aaPredicted RBP17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 JAKMIP1Q96N16 626 aaKnown RBP17.49■□□□□ 0.39
TM9SF1-202ENST00000396854 ASTN2O75129 1339 aaPredicted RBP17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 PITPNM2Q9BZ72 1349 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 POTECB2RU33 542 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 EPHX2P34913 555 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 TNNI2P48788 182 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 SH3BP5LQ7L8J4 393 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 NEK1Q96PY6 1258 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 EHD4Q9H223 541 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 ZSWIM6Q9HCJ5 1215 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 TAOK2Q9UL54 1235 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 TACC3Q9Y6A5 838 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 DDTLA6NHG4 134 aaPredicted RBP17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 HLA-DOAP06340 250 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 MFSD6Q6ZSS7 791 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 GAS2L3Q86XJ1 694 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 APOBEC3FQ8IUX4 373 aaKnown RBP17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 CNNM2Q9H8M5 875 aa17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.48■□□□□ 0.39
TM9SF1-202ENST00000396854 NEDD4P46934 1319 aa17.47■□□□□ 0.39
TM9SF1-202ENST00000396854 CASTP20810 708 aaKnown RBP17.47■□□□□ 0.39
TM9SF1-202ENST00000396854 MCM2P49736 904 aa17.47■□□□□ 0.39
TM9SF1-202ENST00000396854 GABPAQ06546 454 aa17.47■□□□□ 0.39
TM9SF1-202ENST00000396854 SLC4A8Q2Y0W8 1093 aa17.47■□□□□ 0.39
TM9SF1-202ENST00000396854 ANGEL2Q5VTE6 544 aaKnown RBP17.47■□□□□ 0.39
TM9SF1-202ENST00000396854 NCOA7Q8NI08 942 aa17.47■□□□□ 0.39
TM9SF1-202ENST00000396854 TAF1DQ9H5J8 278 aaPredicted RBP17.47■□□□□ 0.39
TM9SF1-202ENST00000396854 HMGB1P09429 215 aaKnown RBP17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 NT5C2P49902 561 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 PDE4BQ07343 736 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 C16orf86Q6ZW13 317 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 GGA3Q9NZ52 723 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 PI4KBQ9UBF8 816 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 PGAP2Q9UHJ9 254 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 ORC4O43929 436 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 TRDNQ13061 729 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 RUFY3Q7L099 469 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 METTL16Q86W50 562 aaKnown RBP17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 MB21D2Q8IYB1 491 aaPredicted RBP17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 KRT23Q9C075 422 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 SERPINB13Q9UIV8 391 aa17.46■□□□□ 0.39
TM9SF1-202ENST00000396854 NEK4P51957 841 aa17.45■□□□□ 0.38
TM9SF1-202ENST00000396854 RASA3Q14644 834 aa17.45■□□□□ 0.38
TM9SF1-202ENST00000396854 RALYLQ86SE5 291 aaKnown RBP17.45■□□□□ 0.38
TM9SF1-202ENST00000396854 ZSCAN29Q8IWY8 852 aaPredicted RBP17.45■□□□□ 0.38
TM9SF1-202ENST00000396854 ZC3H15Q8WU90 426 aaKnown RBP17.45■□□□□ 0.38
TM9SF1-202ENST00000396854 DYNLL2Q96FJ2 89 aa17.45■□□□□ 0.38
TM9SF1-202ENST00000396854 INCENPQ9NQS7 918 aa17.45■□□□□ 0.38
TM9SF1-202ENST00000396854 GREB1LQ9C091 1923 aaPredicted RBP17.45■□□□□ 0.38
TM9SF1-202ENST00000396854 RPS6KB1P23443 525 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 COL9A3Q14050 684 aaPredicted RBP17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 PNMA8AQ86V59 439 aaPredicted RBP17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 UPF3BQ9BZI7 483 aaKnown RBP17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 TMEM39BQ9GZU3 492 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 ZNF287Q9HBT7 754 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 SWAP70Q9UH65 585 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 PPP2R3BQ9Y5P8 575 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 DHX32Q7L7V1 743 aaKnown RBP17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 FOXP4Q8IVH2 680 aaPredicted RBP17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 STK11IPQ8N1F8 1099 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 TEPSINQ96N21 525 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 CSRNP1Q96S65 589 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 DEFB129Q9H1M3 183 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 DDX49Q9Y6V7 483 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms