RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
ATN1-202ENST00000396684 RRP36Q96EU6 259 aaKnown RBP13.69□□□□□ -0.22
ATN1-202ENST00000396684 LIFRP42702 1097 aa13.69□□□□□ -0.22
ATN1-202ENST00000396684 FBXO33Q7Z6M2 555 aa13.69□□□□□ -0.22
ATN1-202ENST00000396684 GADD45BO75293 160 aaPredicted RBP13.68□□□□□ -0.22
ATN1-202ENST00000396684 TPM1P09493 284 aa13.68□□□□□ -0.22
ATN1-202ENST00000396684 SYKP43405 635 aa13.68□□□□□ -0.22
ATN1-202ENST00000396684 AFDNP55196 1824 aaKnown RBP13.68□□□□□ -0.22
ATN1-202ENST00000396684 SMC2O95347 1197 aa13.68□□□□□ -0.22
ATN1-202ENST00000396684 MB21D2Q8IYB1 491 aaPredicted RBP13.68□□□□□ -0.22
ATN1-202ENST00000396684 STAG1Q8WVM7 1258 aa13.68□□□□□ -0.22
ATN1-202ENST00000396684 PKD1L3Q7Z443 1732 aa13.68□□□□□ -0.22
ATN1-202ENST00000396684 TAF6LQ9Y6J9 622 aa13.68□□□□□ -0.22
ATN1-202ENST00000396684 USP17L8P0C7I0 530 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 EIF6P56537 245 aaKnown RBP13.67□□□□□ -0.22
ATN1-202ENST00000396684 RILPL1Q5EBL4 403 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 RBM26Q5T8P6 1007 aaKnown RBP13.67□□□□□ -0.22
ATN1-202ENST00000396684 VGLL2Q8N8G2 317 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 WDR19Q8NEZ3 1342 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 ANO1Q5XXA6 986 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 PDILTQ8N807 584 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 FBXO18Q8NFZ0 1043 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 NSUN4Q96CB9 384 aaKnown RBP13.67□□□□□ -0.22
ATN1-202ENST00000396684 PANK2Q9BZ23 570 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 PNMA1Q8ND90 353 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 TBC1D16Q8TBP0 767 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 NEDD4P46934 1319 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 PRKCSHP14314 528 aaPredicted RBP13.67□□□□□ -0.22
ATN1-202ENST00000396684 DLGAP5Q15398 846 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 COL23A1Q86Y22 540 aaPredicted RBP13.67□□□□□ -0.22
ATN1-202ENST00000396684 CMTR1Q8N1G2 835 aaKnown RBP13.67□□□□□ -0.22
ATN1-202ENST00000396684 CCDC43Q96MW1 224 aaKnown RBP13.67□□□□□ -0.22
ATN1-202ENST00000396684 C6orf50Q9HD87 102 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 LRRC4BQ9NT99 713 aa13.67□□□□□ -0.22
ATN1-202ENST00000396684 ZNF76P36508 570 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 KCNB2Q92953 911 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 ATP6V0A2Q9Y487 856 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATN1-202ENST00000396684 ZNF165P49910 485 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 STX1AQ16623 288 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 TTLL6Q8N841 843 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 SPC24Q8NBT2 197 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 hCG_1642624A0A1W2PR95 340 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 DDAH1O94760 285 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 CCDC93Q567U6 631 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 RAB34Q9BZG1 259 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 ANO8Q9HCE9 1232 aaPredicted RBP13.66□□□□□ -0.22
ATN1-202ENST00000396684 DCP1AQ9NPI6 582 aaPredicted RBP13.66□□□□□ -0.22
ATN1-202ENST00000396684 INCENPQ9NQS7 918 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 KCNJ14Q9UNX9 436 aa13.66□□□□□ -0.22
ATN1-202ENST00000396684 CAVIN2O95810 425 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 GNA11P29992 359 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 EXOSC10Q01780 885 aaKnown RBP13.65□□□□□ -0.22
ATN1-202ENST00000396684 MYSM1Q5VVJ2 828 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 CYB5R4Q7L1T6 521 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 SMTNL1A8MU46 457 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 SH3RF3Q8TEJ3 882 aaPredicted RBP13.65□□□□□ -0.22
ATN1-202ENST00000396684 CUL5Q93034 780 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 RIC1Q4ADV7 1423 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 BIN1O00499 593 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 KLRK1P26718 216 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 TNNI2P48788 182 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 PODNQ7Z5L7 613 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 TCP11L1Q9NUJ3 509 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 USP25Q9UHP3 1055 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 BCS1LQ9Y276 419 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 LTBP4Q8N2S1 1624 aa13.65□□□□□ -0.22
ATN1-202ENST00000396684 PLSCR1O15162 318 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 IGSF3O75054 1194 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 SERPINC1P01008 464 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 TMEM266Q2M3C6 531 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 LZTS2Q9BRK4 669 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 VPS54Q9P1Q0 977 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 C21orf2O43822 256 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 UBA7P41226 1012 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 STIM1Q13586 685 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 TSR1Q2NL82 804 aaKnown RBP13.64□□□□□ -0.23
ATN1-202ENST00000396684 KRI1Q8N9T8 703 aaKnown RBP13.64□□□□□ -0.23
ATN1-202ENST00000396684 USP28Q96RU2 1077 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 YEATS4O95619 227 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 KRT18P05783 430 aaKnown RBP13.64□□□□□ -0.23
ATN1-202ENST00000396684 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 SLC15A2Q16348 729 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 KANK3Q6NY19 840 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 GPCPD1Q9NPB8 672 aa13.64□□□□□ -0.23
ATN1-202ENST00000396684 A0A1B0GVL5 298 aa13.63□□□□□ -0.23
ATN1-202ENST00000396684 ZNF445P59923 1031 aa13.63□□□□□ -0.23
ATN1-202ENST00000396684 DYNLL2Q96FJ2 89 aa13.63□□□□□ -0.23
ATN1-202ENST00000396684 PYM1Q9BRP8 204 aaKnown RBP13.63□□□□□ -0.23
ATN1-202ENST00000396684 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
ATN1-202ENST00000396684 USP17L3A6NCW0 530 aa13.63□□□□□ -0.23
ATN1-202ENST00000396684 USP17L4A6NCW7 530 aa13.63□□□□□ -0.23
ATN1-202ENST00000396684 IFNAR1P17181 557 aa13.63□□□□□ -0.23
ATN1-202ENST00000396684 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
ATN1-202ENST00000396684 UVSSAQ2YD98 709 aa13.63□□□□□ -0.23
ATN1-202ENST00000396684 USP17L1Q7RTZ2 530 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms