RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 NCAPGQ9BPX3 1015 aa15.52■□□□□ 0.08
COL4A3-202ENST00000396578 ADAMTS2O95450 1211 aa15.52■□□□□ 0.07
COL4A3-202ENST00000396578 BCRP11274 1271 aa15.52■□□□□ 0.07
COL4A3-202ENST00000396578 FAN1Q9Y2M0 1017 aa15.52■□□□□ 0.07
COL4A3-202ENST00000396578 PHLDB3Q6NSJ2 640 aa15.52■□□□□ 0.07
COL4A3-202ENST00000396578 KSR2Q6VAB6 950 aa15.52■□□□□ 0.07
COL4A3-202ENST00000396578 P3H4Q92791 437 aa15.52■□□□□ 0.07
COL4A3-202ENST00000396578 EXOC7Q9UPT5 735 aa15.52■□□□□ 0.07
COL4A3-202ENST00000396578 COG7P83436 770 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 ZSCAN26Q16670 478 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 MRPL50Q8N5N7 158 aaKnown RBP15.51■□□□□ 0.07
COL4A3-202ENST00000396578 NYXQ9GZU5 481 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 PPFIA4O75335 1185 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 LUC7L3O95232 432 aaKnown RBP15.51■□□□□ 0.07
COL4A3-202ENST00000396578 PPP2R5DQ14738 602 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 MGARPQ8TDB4 240 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 RPGRIP1Q96KN7 1286 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 NLRP3Q96P20 1036 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 CEP104O60308 925 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 BEND3Q5T5X7 828 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 RAPGEF3O95398 923 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 PPP2R5CQ13362 524 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 KRT71Q3SY84 523 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 ANO1Q5XXA6 986 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 PEX26Q7Z412 305 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 KLHL7Q8IXQ5 586 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 MLKLQ8NB16 471 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 RGS16O15492 202 aaPredicted RBP15.51■□□□□ 0.07
COL4A3-202ENST00000396578 ANXA1P04083 346 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 RPS6KB1P23443 525 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 CDAN1Q8IWY9 1227 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 DEXIO95424 95 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 STRN3Q13033 797 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 RPS6KA1Q15418 735 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 LMBR1LQ6UX01 489 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 MAIP1Q8WWC4 291 aa15.51■□□□□ 0.07
COL4A3-202ENST00000396578 HIP1RO75146 1068 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 SLC8A1P32418 973 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 FOXO3O43524 673 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 NLRP12P59046 1061 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 HAUS8Q9BT25 410 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 HELLSQ9NRZ9 838 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 DCUN1D2Q6PH85 259 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 COPS6Q7L5N1 327 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 MIGA1Q8NAN2 632 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 USP26Q9BXU7 913 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 CLSTN2Q9H4D0 955 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 CCDC169A6NNP5 214 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 CAPN7Q9Y6W3 813 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 RPS6KA2Q15349 733 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 CUTAO60888 179 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 STX2P32856 288 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 NUCKS1Q9H1E3 243 aaKnown RBP15.5■□□□□ 0.07
COL4A3-202ENST00000396578 KLHL14Q9P2G3 628 aa15.5■□□□□ 0.07
COL4A3-202ENST00000396578 DDX41Q9UJV9 622 aaKnown RBP15.5■□□□□ 0.07
COL4A3-202ENST00000396578 CBX8Q9HC52 389 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 MAPK8IP1Q9UQF2 711 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 HARSP12081 509 aaKnown RBP15.49■□□□□ 0.07
COL4A3-202ENST00000396578 CHMLP26374 656 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 PHBP35232 272 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 SLC12A2P55011 1212 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 TACO1Q9BSH4 297 aaKnown RBP15.49■□□□□ 0.07
COL4A3-202ENST00000396578 DISP3Q9P2K9 1392 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 ZNF202O95125 648 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 NSMCE1Q8WV22 266 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 PSMB7Q99436 277 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 CTTNBP2NLQ9P2B4 639 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 NESP48681 1621 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 ZBTB17Q13105 803 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 RPRD2Q5VT52 1461 aaKnown RBP15.49■□□□□ 0.07
COL4A3-202ENST00000396578 SOS1Q07889 1333 aaPredicted RBP15.49■□□□□ 0.07
COL4A3-202ENST00000396578 SP4Q02446 784 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 FCHSD1Q86WN1 690 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 RIPOR2Q9Y4F9 1068 aa15.49■□□□□ 0.07
COL4A3-202ENST00000396578 BRD3Q15059 726 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 MAGI1Q96QZ7 1491 aaPredicted RBP15.48■□□□□ 0.07
COL4A3-202ENST00000396578 CEP85Q6P2H3 762 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 LDHBP07195 334 aaKnown RBP15.48■□□□□ 0.07
COL4A3-202ENST00000396578 PLEKHM2Q8IWE5 1019 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 IQCDQ96DY2 449 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 KRT12Q99456 494 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 IFIH1Q9BYX4 1025 aaKnown RBP15.48■□□□□ 0.07
COL4A3-202ENST00000396578 DCTPP1Q9H773 170 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 GOLGA8KD6RF30 607 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 WDR46O15213 610 aaKnown RBP15.48■□□□□ 0.07
COL4A3-202ENST00000396578 POSTNQ15063 836 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 SFMBT2Q5VUG0 894 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 DACT3Q96B18 629 aaPredicted RBP15.48■□□□□ 0.07
COL4A3-202ENST00000396578 TRIM6Q9C030 488 aaPredicted RBP15.48■□□□□ 0.07
COL4A3-202ENST00000396578 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.48■□□□□ 0.07
COL4A3-202ENST00000396578 ARHGAP42A6NI28 874 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 SMIM24O75264 130 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 KRT3P12035 628 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 CTNNA1P35221 906 aaKnown RBP15.48■□□□□ 0.07
COL4A3-202ENST00000396578 PPARDQ03181 441 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 PA2G4Q9UQ80 394 aaKnown RBP15.48■□□□□ 0.07
COL4A3-202ENST00000396578 USTQ9Y2C2 406 aa15.48■□□□□ 0.07
COL4A3-202ENST00000396578 SND1Q7KZF4 910 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL4A3-202ENST00000396578 SAR1BQ9Y6B6 198 aa15.47■□□□□ 0.07
COL4A3-202ENST00000396578 MAN1A1P33908 653 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms