RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 RPS8P62241 208 aaKnown RBP19.17■□□□□ 0.66
TRIM39-205ENST00000396551 LRMPQ12912 555 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 CCDC144BQ3MJ40 725 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 CEP57L1Q8IYX8 460 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 AOPEPQ8N6M6 819 aa19.17■□□□□ 0.66
TRIM39-205ENST00000396551 UQCRHLA0A096LP55 91 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 ERICH2A1L162 156 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 GNPATO15228 680 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 UQCRHP07919 91 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 SETDB2Q96T68 719 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 NYXQ9GZU5 481 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 CLIP2Q9UDT6 1046 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 HPSEQ9Y251 543 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 THSD7AQ9UPZ6 1657 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 DLEC1Q9Y238 1755 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 MMP1P03956 469 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 DPCR1Q3MIW9 517 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 CCDC82Q8N4S0 544 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 CRACR2BQ8N4Y2 399 aaPredicted RBP19.16■□□□□ 0.66
TRIM39-205ENST00000396551 KCNJ14Q9UNX9 436 aa19.16■□□□□ 0.66
TRIM39-205ENST00000396551 TNRC6CQ9HCJ0 1690 aaKnown RBP19.16■□□□□ 0.66
TRIM39-205ENST00000396551 BECN2A8MW95 431 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 TNKSO95271 1327 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 DNTTIP2Q5QJE6 756 aaKnown RBP19.15■□□□□ 0.66
TRIM39-205ENST00000396551 FAM182BQ5T319 152 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 NBPF5PQ86XG9 351 aaPredicted RBP19.15■□□□□ 0.66
TRIM39-205ENST00000396551 TMTC2Q8N394 836 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 NLRP3Q96P20 1036 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 BTBD18B2RXH4 712 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 FANCBQ8NB91 859 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 WASF1Q92558 559 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 CLIC6Q96NY7 704 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 SLC3A2P08195 630 aaKnown RBP19.15■□□□□ 0.66
TRIM39-205ENST00000396551 NUP133Q8WUM0 1156 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 NSUN4Q96CB9 384 aaKnown RBP19.15■□□□□ 0.66
TRIM39-205ENST00000396551 UBAC1Q9BSL1 405 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 BRIP1Q9BX63 1249 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 TFCP2L1Q9NZI6 479 aa19.15■□□□□ 0.66
TRIM39-205ENST00000396551 RCAN1P53805 252 aa19.14■□□□□ 0.66
TRIM39-205ENST00000396551 NOSTRINQ8IVI9 506 aa19.14■□□□□ 0.66
TRIM39-205ENST00000396551 ESR2Q92731 530 aa19.14■□□□□ 0.66
TRIM39-205ENST00000396551 MRFAP1L1Q96HT8 127 aa19.14■□□□□ 0.66
TRIM39-205ENST00000396551 FAM237AA0A1B0GTK4 181 aa19.14■□□□□ 0.65
TRIM39-205ENST00000396551 TOB1P50616 345 aaPredicted RBP19.14■□□□□ 0.65
TRIM39-205ENST00000396551 EVX2Q03828 476 aa19.14■□□□□ 0.65
TRIM39-205ENST00000396551 FNBP4Q8N3X1 1017 aaPredicted RBP19.14■□□□□ 0.65
TRIM39-205ENST00000396551 LY75O60449 1722 aa19.14■□□□□ 0.65
TRIM39-205ENST00000396551 TM4SF1P30408 202 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 RESP18Q5W5W9 173 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 DIS3L2Q8IYB7 885 aaKnown RBP19.13■□□□□ 0.65
TRIM39-205ENST00000396551 TRIM22Q8IYM9 498 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.13■□□□□ 0.65
TRIM39-205ENST00000396551 LAMB1P07942 1786 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 MAST2Q6P0Q8 1798 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 BIN1O00499 593 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 SEMA3EO15041 775 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 ZPR1O75312 459 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 DEXIO95424 95 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 ENAHQ8N8S7 591 aaPredicted RBP19.13■□□□□ 0.65
TRIM39-205ENST00000396551 JMYQ8N9B5 988 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 TIGD1Q96MW7 591 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 SYKP43405 635 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 MECOMQ03112 1051 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 GLIPR1L2Q4G1C9 344 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 CTR9Q6PD62 1173 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 CACTINQ8WUQ7 758 aaKnown RBP19.13■□□□□ 0.65
TRIM39-205ENST00000396551 ARHGEF1Q92888 912 aaKnown RBP19.13■□□□□ 0.65
TRIM39-205ENST00000396551 SHISA4Q96DD7 197 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 CCNL1Q9UK58 526 aaPredicted RBP19.13■□□□□ 0.65
TRIM39-205ENST00000396551 CCDC88AQ3V6T2 1871 aa19.13■□□□□ 0.65
TRIM39-205ENST00000396551 SBF2Q86WG5 1849 aa19.12■□□□□ 0.65
TRIM39-205ENST00000396551 NLRP12P59046 1061 aa19.12■□□□□ 0.65
TRIM39-205ENST00000396551 NAT10Q9H0A0 1025 aaKnown RBP19.12■□□□□ 0.65
TRIM39-205ENST00000396551 CCDC196A0A1B0GTZ2 297 aa19.12■□□□□ 0.65
TRIM39-205ENST00000396551 PRDM1O75626 825 aa19.12■□□□□ 0.65
TRIM39-205ENST00000396551 FGRP09769 529 aa19.12■□□□□ 0.65
TRIM39-205ENST00000396551 SLC51AQ86UW1 340 aa19.12■□□□□ 0.65
TRIM39-205ENST00000396551 TXNRD3Q86VQ6 643 aa19.12■□□□□ 0.65
TRIM39-205ENST00000396551 ZSCAN10Q96SZ4 725 aaPredicted RBP19.12■□□□□ 0.65
TRIM39-205ENST00000396551 BPIFA3Q9BQP9 254 aa19.12■□□□□ 0.65
TRIM39-205ENST00000396551 PDS5AQ29RF7 1337 aaKnown RBP19.12■□□□□ 0.65
TRIM39-205ENST00000396551 HIBADHP31937 336 aaKnown RBP19.12■□□□□ 0.65
TRIM39-205ENST00000396551 RBM6P78332 1123 aaKnown RBP19.12■□□□□ 0.65
TRIM39-205ENST00000396551 IRS2Q9Y4H2 1338 aa19.11■□□□□ 0.65
TRIM39-205ENST00000396551 CUTAO60888 179 aa19.11■□□□□ 0.65
TRIM39-205ENST00000396551 RTCBQ9Y3I0 505 aaKnown RBP19.11■□□□□ 0.65
TRIM39-205ENST00000396551 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
TRIM39-205ENST00000396551 PRDX5P30044 214 aa19.11■□□□□ 0.65
TRIM39-205ENST00000396551 NR5A1Q13285 461 aa19.11■□□□□ 0.65
TRIM39-205ENST00000396551 TPTE2Q6XPS3 522 aa19.11■□□□□ 0.65
TRIM39-205ENST00000396551 ANKRD2Q9GZV1 360 aa19.11■□□□□ 0.65
TRIM39-205ENST00000396551 FOXP1Q9H334 677 aaPredicted RBP19.11■□□□□ 0.65
TRIM39-205ENST00000396551 OXER1Q8TDS5 423 aa19.1■□□□□ 0.65
TRIM39-205ENST00000396551 USP17L12C9JPN9 530 aa19.1■□□□□ 0.65
TRIM39-205ENST00000396551 USP17L21D6R901 530 aa19.1■□□□□ 0.65
TRIM39-205ENST00000396551 FUT2Q10981 343 aa19.1■□□□□ 0.65
TRIM39-205ENST00000396551 ARID5BQ14865 1188 aa19.1■□□□□ 0.65
TRIM39-205ENST00000396551 SAFBQ15424 915 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRIM39-205ENST00000396551 AATFQ9NY61 560 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRIM39-205ENST00000396551 TUBE1Q9UJT0 475 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms