RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 RGPD2P0DJD1 1756 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 ZAP70P43403 619 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 HAND2P61296 217 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 FOXP4Q8IVH2 680 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 KIF18AQ8NI77 898 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 MYH8P13535 1937 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 EIF6P56537 245 aaKnown RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 OTUD7AQ8TE49 926 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 VPS33BQ9H267 617 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 MYO10Q9HD67 2058 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 HDLBPQ00341 1268 aaKnown RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 ASPRV1Q53RT3 343 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 TTLL5Q6EMB2 1281 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 FANCBQ8NB91 859 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 CCDC150Q8NCX0 1101 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 RNF214Q8ND24 703 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 KLHDC4Q8TBB5 520 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 IWS1Q96ST2 819 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 KNTC1P50748 2209 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 MPHOSPH10O00566 681 aaKnown RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 PARP1P09874 1014 aaKnown RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 SYCP1Q15431 976 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 PPP4R3AQ6IN85 833 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 KANSL2Q9H9L4 492 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 N4BP2Q86UW6 1770 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 A0A0D9SFI3 127 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 SERPINB2P05120 415 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 SMARCA1P28370 1054 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 ARID4AP29374 1257 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 FSIP1Q8NA03 581 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 PCMTD1Q96MG8 357 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 ATP2B1P20020 1258 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 CEBPZQ03701 1054 aaKnown RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 TSG101Q99816 390 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 PAXBP1Q9Y5B6 917 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 PHLPP1O60346 1717 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 RPL13P26373 211 aaKnown RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 DACT1Q9NYF0 836 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 IMPACTQ9P2X3 320 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 APOA5Q6Q788 366 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 MNS1Q8NEH6 495 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 UBE2Q2Q8WVN8 375 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 MASTLQ96GX5 879 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 HERC5Q9UII4 1024 aaKnown RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 KDM6AO15550 1401 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 CUTAO60888 179 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 CDR1P51861 262 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 MYSM1Q5VVJ2 828 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 KRT79Q5XKE5 535 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 TMEM87AQ8NBN3 555 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 SLC17A8Q8NDX2 589 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 PLVAPQ9BX97 442 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 PI4KBQ9UBF8 816 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 PKD1L3Q7Z443 1732 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 MRC1P22897 1456 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 FOSP01100 380 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 TIGD1Q96MW7 591 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 ITGB4P16144 1822 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 PPARAQ07869 468 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 KRT26Q7Z3Y9 468 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 KRT25Q7Z3Z0 450 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 SP8Q8IXZ3 490 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 CHURC1Q8WUH1 139 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 STAG1Q8WVM7 1258 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 ZSCAN10Q96SZ4 725 aaPredicted RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 NUCKS1Q9H1E3 243 aaKnown RBP3.85□□□□□ -1.79
VPS13C-203ENST00000395896 ANTXR1Q9H6X2 564 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 MINPP1Q9UNW1 487 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 GON4LQ3T8J9 2241 aa3.85□□□□□ -1.79
VPS13C-203ENST00000395896 NOSTRINQ8IVI9 506 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 NIM1KQ8IY84 436 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF594Q96JF6 807 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-203ENST00000395896 ASNSP08243 561 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 NAPAP54920 295 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 DNM1Q05193 864 aaKnown RBP3.84□□□□□ -1.79
VPS13C-203ENST00000395896 CCDC96Q2M329 555 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 HSP90B2PQ58FF3 399 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 CREBRFQ8IUR6 639 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 PLSCR1O15162 318 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 TOP1P11387 765 aaKnown RBP3.84□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF654Q8IZM8 581 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 HELBQ8NG08 1087 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-203ENST00000395896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.84□□□□□ -1.792e-6■■□□□ 13.1
VPS13C-203ENST00000395896 KDM4FA0A1W2PPD8 638 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 USP17L12C9JPN9 530 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 USP17L21D6R901 530 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 ZSCAN23Q3MJ62 389 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 HS2ST1Q7LGA3 356 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 USP48Q86UV5 1035 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 PRIMPOLQ96LW4 560 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 STRBPQ96SI9 672 aaKnown RBP3.84□□□□□ -1.79
VPS13C-203ENST00000395896 TTLL1O95922 423 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 LMOD1P29536 600 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-203ENST00000395896 STAT6P42226 847 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 TRIM14Q14142 442 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 ME3Q16798 604 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 ARHGAP29Q52LW3 1261 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 LARGE2Q8N3Y3 721 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 PNMA1Q8ND90 353 aa3.84□□□□□ -1.79
VPS13C-203ENST00000395896 SRRTQ9BXP5 876 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms