RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 GADL1Q6ZQY3 521 aa22.09■■□□□ 1.13
CXCL12-204ENST00000395793 TRIM75PA6NK02 468 aa22.08■■□□□ 1.13
CXCL12-204ENST00000395793 SLC9C1Q4G0N8 1177 aa22.08■■□□□ 1.13
CXCL12-204ENST00000395793 SH3TC2Q8TF17 1288 aa22.08■■□□□ 1.13
CXCL12-204ENST00000395793 PARK7Q99497 189 aaKnown RBP22.08■■□□□ 1.13
CXCL12-204ENST00000395793 BRCA2P51587 3418 aa22.08■■□□□ 1.13
CXCL12-204ENST00000395793 MYH1P12882 1939 aa22.08■■□□□ 1.12
CXCL12-204ENST00000395793 FLT1P17948 1338 aa22.07■■□□□ 1.12
CXCL12-204ENST00000395793 EN2P19622 333 aaPredicted RBP22.07■■□□□ 1.12
CXCL12-204ENST00000395793 PSMC4P43686 418 aa22.07■■□□□ 1.12
CXCL12-204ENST00000395793 DYNLL1P63167 89 aaKnown RBP22.07■■□□□ 1.12
CXCL12-204ENST00000395793 FASTKD5Q7L8L6 764 aaKnown RBP22.07■■□□□ 1.12
CXCL12-204ENST00000395793 MAPKAPK5Q8IW41 473 aa22.07■■□□□ 1.12
CXCL12-204ENST00000395793 TGFBRAP1Q8WUH2 860 aa22.07■■□□□ 1.12
CXCL12-204ENST00000395793 DNAJC18Q9H819 358 aa22.07■■□□□ 1.12
CXCL12-204ENST00000395793 BAG3O95817 575 aa22.06■■□□□ 1.12
CXCL12-204ENST00000395793 OSBPP22059 807 aa22.06■■□□□ 1.12
CXCL12-204ENST00000395793 CAP2P40123 477 aa22.06■■□□□ 1.12
CXCL12-204ENST00000395793 AACSQ86V21 672 aa22.06■■□□□ 1.12
CXCL12-204ENST00000395793 SIRT2Q8IXJ6 389 aa22.06■■□□□ 1.12
CXCL12-204ENST00000395793 NOL10Q9BSC4 688 aaKnown RBP22.06■■□□□ 1.12
CXCL12-204ENST00000395793 ANTXR1Q9H6X2 564 aa22.06■■□□□ 1.12
CXCL12-204ENST00000395793 IL1RAPL2Q9NP60 686 aa22.06■■□□□ 1.12
CXCL12-204ENST00000395793 COG6Q9Y2V7 657 aa22.06■■□□□ 1.12
CXCL12-204ENST00000395793 GNRH1P01148 92 aa22.05■■□□□ 1.12
CXCL12-204ENST00000395793 JAG1P78504 1218 aa22.05■■□□□ 1.12
CXCL12-204ENST00000395793 TREML2Q5T2D2 321 aa22.05■■□□□ 1.12
CXCL12-204ENST00000395793 SRRDQ9UH36 339 aa22.05■■□□□ 1.12
CXCL12-204ENST00000395793 DDX60LQ5H9U9 1706 aaKnown RBP22.04■■□□□ 1.12
CXCL12-204ENST00000395793 IDH1O75874 414 aaKnown RBP22.04■■□□□ 1.12
CXCL12-204ENST00000395793 MYCP01106 439 aaPredicted RBP22.04■■□□□ 1.12
CXCL12-204ENST00000395793 PLCG2P16885 1265 aa22.04■■□□□ 1.12
CXCL12-204ENST00000395793 CYP7A1P22680 504 aa22.04■■□□□ 1.12
CXCL12-204ENST00000395793 SHROOM1Q2M3G4 852 aaPredicted RBP22.04■■□□□ 1.12
CXCL12-204ENST00000395793 ERC1Q8IUD2 1116 aa22.04■■□□□ 1.12
CXCL12-204ENST00000395793 RHPN1Q8TCX5 695 aa22.04■■□□□ 1.12
CXCL12-204ENST00000395793 ZBTB40Q9NUA8 1239 aa22.04■■□□□ 1.12
CXCL12-204ENST00000395793 HERC5Q9UII4 1024 aaKnown RBP22.04■■□□□ 1.12
CXCL12-204ENST00000395793 SLC45A1Q9Y2W3 748 aa22.04■■□□□ 1.12
CXCL12-204ENST00000395793 MKI67P46013 3256 aaKnown RBP22.03■■□□□ 1.12
CXCL12-204ENST00000395793 PRMT2P55345 433 aa22.03■■□□□ 1.12
CXCL12-204ENST00000395793 SPP2Q13103 211 aa22.03■■□□□ 1.12
CXCL12-204ENST00000395793 PRPF38BQ5VTL8 546 aaKnown RBP22.03■■□□□ 1.12
CXCL12-204ENST00000395793 DHX36Q9H2U1 1008 aaKnown RBP22.03■■□□□ 1.12
CXCL12-204ENST00000395793 PI4KBQ9UBF8 816 aa22.03■■□□□ 1.12
CXCL12-204ENST00000395793 PALD1Q9ULE6 856 aa22.03■■□□□ 1.12
CXCL12-204ENST00000395793 AGTPBP1Q9UPW5 1226 aa22.03■■□□□ 1.12
CXCL12-204ENST00000395793 DOCK3Q8IZD9 2030 aa22.02■■□□□ 1.12
CXCL12-204ENST00000395793 FMNL1O95466 1100 aaPredicted RBP22.02■■□□□ 1.12
CXCL12-204ENST00000395793 MS4A1P11836 297 aa22.02■■□□□ 1.12
CXCL12-204ENST00000395793 NBPF11Q86T75 865 aa22.02■■□□□ 1.12
CXCL12-204ENST00000395793 METTL16Q86W50 562 aaKnown RBP22.02■■□□□ 1.12
CXCL12-204ENST00000395793 MIGA1Q8NAN2 632 aa22.02■■□□□ 1.12
CXCL12-204ENST00000395793 SAP30BPQ9UHR5 308 aaKnown RBP22.02■■□□□ 1.12
CXCL12-204ENST00000395793 DDX19BQ9UMR2 479 aa22.02■■□□□ 1.12
CXCL12-204ENST00000395793 MYPNQ86TC9 1320 aa22.02■■□□□ 1.12
CXCL12-204ENST00000395793 IGSF3O75054 1194 aa22.01■■□□□ 1.11
CXCL12-204ENST00000395793 PRKCZQ05513 592 aa22.01■■□□□ 1.11
CXCL12-204ENST00000395793 SLC4A8Q2Y0W8 1093 aa22.01■■□□□ 1.11
CXCL12-204ENST00000395793 MAGEB6Q8N7X4 407 aa22.01■■□□□ 1.11
CXCL12-204ENST00000395793 ZNF280CQ8ND82 737 aa22.01■■□□□ 1.11
CXCL12-204ENST00000395793 TMEM106CQ9BVX2 250 aa22.01■■□□□ 1.11
CXCL12-204ENST00000395793 RCAN3Q9UKA8 241 aa22.01■■□□□ 1.11
CXCL12-204ENST00000395793 NAV1Q8NEY1 1877 aa22■■□□□ 1.11
CXCL12-204ENST00000395793 USP17L5A8MUK1 530 aa22■■□□□ 1.11
CXCL12-204ENST00000395793 APBB1O00213 710 aa22■■□□□ 1.11
CXCL12-204ENST00000395793 HMGCS2P54868 508 aa22■■□□□ 1.11
CXCL12-204ENST00000395793 MTFR1Q15390 333 aa22■■□□□ 1.11
CXCL12-204ENST00000395793 RPAP2Q8IXW5 612 aaPredicted RBP22■■□□□ 1.11
CXCL12-204ENST00000395793 PROCA1Q8NCQ7 364 aaPredicted RBP22■■□□□ 1.11
CXCL12-204ENST00000395793 GABRQQ9UN88 632 aa22■■□□□ 1.11
CXCL12-204ENST00000395793 SLC34A2O95436 690 aa21.99■■□□□ 1.11
CXCL12-204ENST00000395793 HSP90AB4PQ58FF6 505 aa21.99■■□□□ 1.11
CXCL12-204ENST00000395793 C20orf194Q5TEA3 1177 aa21.99■■□□□ 1.11
CXCL12-204ENST00000395793 GDF11O95390 407 aa21.98■■□□□ 1.11
CXCL12-204ENST00000395793 HOXD10P28358 340 aa21.98■■□□□ 1.11
CXCL12-204ENST00000395793 FCGRTP55899 365 aa21.98■■□□□ 1.11
CXCL12-204ENST00000395793 SH3D19Q5HYK7 790 aa21.98■■□□□ 1.11
CXCL12-204ENST00000395793 FOXP4Q8IVH2 680 aaPredicted RBP21.98■■□□□ 1.11
CXCL12-204ENST00000395793 SMCR8Q8TEV9 937 aaPredicted RBP21.98■■□□□ 1.11
CXCL12-204ENST00000395793 KIF1BPQ96EK5 621 aa21.98■■□□□ 1.11
CXCL12-204ENST00000395793 TBC1D2Q9BYX2 928 aa21.98■■□□□ 1.11
CXCL12-204ENST00000395793 GRK4P32298 578 aa21.97■■□□□ 1.11
CXCL12-204ENST00000395793 RAET1EQ8TD07 263 aa21.97■■□□□ 1.11
CXCL12-204ENST00000395793 RIOK1Q9BRS2 568 aaKnown RBP21.97■■□□□ 1.11
CXCL12-204ENST00000395793 MAP3K12Q12852 859 aa21.96■■□□□ 1.11
CXCL12-204ENST00000395793 MTMR2Q13614 643 aa21.96■■□□□ 1.11
CXCL12-204ENST00000395793 CRACR2BQ8N4Y2 399 aaPredicted RBP21.96■■□□□ 1.11
CXCL12-204ENST00000395793 ANKRD13CQ8N6S4 541 aa21.96■■□□□ 1.11
CXCL12-204ENST00000395793 SHISA4Q96DD7 197 aa21.96■■□□□ 1.11
CXCL12-204ENST00000395793 WDR18Q9BV38 432 aa21.96■■□□□ 1.11
CXCL12-204ENST00000395793 ZBTB21Q9ULJ3 1066 aa21.96■■□□□ 1.11
CXCL12-204ENST00000395793 PLXNB2O15031 1838 aa21.95■■□□□ 1.1
CXCL12-204ENST00000395793 HMMRO75330 724 aa21.95■■□□□ 1.1
CXCL12-204ENST00000395793 ASNSP08243 561 aa21.95■■□□□ 1.1
CXCL12-204ENST00000395793 CLASRPQ8N2M8 674 aaKnown RBP21.95■■□□□ 1.1
CXCL12-204ENST00000395793 EDC3Q96F86 508 aaKnown RBP21.95■■□□□ 1.1
CXCL12-204ENST00000395793 ASCC2Q9H1I8 757 aaPredicted RBP21.95■■□□□ 1.1
CXCL12-204ENST00000395793 AS3MTQ9HBK9 375 aa21.95■■□□□ 1.1
CXCL12-204ENST00000395793 HLA-DOAP06340 250 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms