RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 NCAPHQ15003 741 aa10.64□□□□□ -0.71
CDRT1-203ENST00000395667 LONRF3Q496Y0 759 aa10.64□□□□□ -0.71
CDRT1-203ENST00000395667 ESR2Q92731 530 aa10.64□□□□□ -0.71
CDRT1-203ENST00000395667 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
CDRT1-203ENST00000395667 DNAJC5Q9H3Z4 198 aa10.64□□□□□ -0.71
CDRT1-203ENST00000395667 TUBE1Q9UJT0 475 aa10.64□□□□□ -0.71
CDRT1-203ENST00000395667 IKBKBO14920 756 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 FANCCQ00597 558 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 KRBA2Q6ZNG9 492 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 ADGRA1Q86SQ6 560 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 CRACR2BQ8N4Y2 399 aaPredicted RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 FANCBQ8NB91 859 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 CCDC150Q8NCX0 1101 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 HOOK1Q9UJC3 728 aaKnown RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 THRAP3Q9Y2W1 955 aaKnown RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 CTIFO43310 598 aaKnown RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 SERPINC1P01008 464 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 MYL5Q02045 173 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 CAVIN4Q5BKX8 364 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 RILPL1Q5EBL4 403 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 BICDL1Q6ZP65 573 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 PDCL2Q8N4E4 241 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 COL16A1Q07092 1604 aaPredicted RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 MYH14Q7Z406 1995 aaKnown RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 ECM29Q5VYK3 1845 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 TNKSO95271 1327 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 FAM237AA0A1B0GTK4 181 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 NUTM2BA6NNL0 878 aaPredicted RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 NUTM2EB1AL46 878 aaPredicted RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 ATP1A3P13637 1013 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 NR5A1Q13285 461 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 ERFEQ4G0M1 354 aa10.63□□□□□ -0.71
CDRT1-203ENST00000395667 METTL16Q86W50 562 aaKnown RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 NUTM2AQ8IVF1 878 aaPredicted RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 CCAR2Q8N163 923 aaKnown RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 CCDC94Q9BW85 323 aaPredicted RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 FOXP1Q9H334 677 aaPredicted RBP10.63□□□□□ -0.71
CDRT1-203ENST00000395667 TOB1P50616 345 aaPredicted RBP10.62□□□□□ -0.71
CDRT1-203ENST00000395667 SMARCC1Q92922 1105 aaPredicted RBP10.62□□□□□ -0.71
CDRT1-203ENST00000395667 MTA3Q9BTC8 594 aa10.62□□□□□ -0.71
CDRT1-203ENST00000395667 PCDHA5Q9Y5H7 936 aa10.62□□□□□ -0.71
CDRT1-203ENST00000395667 WTIPA6NIX2 430 aaPredicted RBP10.62□□□□□ -0.71
CDRT1-203ENST00000395667 UBASH3AP57075 661 aa10.62□□□□□ -0.71
CDRT1-203ENST00000395667 CFAP100Q494V2 611 aa10.62□□□□□ -0.71
CDRT1-203ENST00000395667 BCL11BQ9C0K0 894 aaPredicted RBP10.62□□□□□ -0.71
CDRT1-203ENST00000395667 TIAM2Q8IVF5 1701 aa10.62□□□□□ -0.71
CDRT1-203ENST00000395667 ROBO1Q9Y6N7 1651 aa10.62□□□□□ -0.71
CDRT1-203ENST00000395667 NID2Q14112 1375 aa10.62□□□□□ -0.71
CDRT1-203ENST00000395667 CBFA2T2O43439 604 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 KCNQ2O43526 872 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 XBP1P17861 261 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 RCAN1P53805 252 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 UBE4AQ14139 1066 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 DHX8Q14562 1220 aaKnown RBP10.61□□□□□ -0.71
CDRT1-203ENST00000395667 PPP4R3BQ5MIZ7 849 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 ARMCX5Q6P1M9 558 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 C3orf67Q6ZVT6 689 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 CABP5Q9NP86 173 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 PCDHB6Q9Y5E3 794 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 PHLPP1O60346 1717 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 ZNF804BA4D1E1 1349 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 WNK3Q9BYP7 1800 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 CYP2D7A0A087X1C5 515 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 SMIM22K7EJ46 135 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 POLR2DO15514 142 aaKnown RBP10.61□□□□□ -0.71
CDRT1-203ENST00000395667 DYNLL1P63167 89 aaKnown RBP10.61□□□□□ -0.71
CDRT1-203ENST00000395667 GRIN1Q05586 938 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 NYAP1Q6ZVC0 841 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 PDILTQ8N807 584 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 OXER1Q8TDS5 423 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 CEP131Q9UPN4 1083 aa10.61□□□□□ -0.71
CDRT1-203ENST00000395667 FOXN1O15353 648 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 PRDM1O75626 825 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 PTPREP23469 700 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 IFIT1BQ5T764 474 aaKnown RBP10.6□□□□□ -0.71
CDRT1-203ENST00000395667 CLEC4GQ6UXB4 293 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 CATIPQ7Z7H3 387 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 BSDC1Q9NW68 430 aaPredicted RBP10.6□□□□□ -0.71
CDRT1-203ENST00000395667 FBXO2Q9UK22 296 aaPredicted RBP10.6□□□□□ -0.71
CDRT1-203ENST00000395667 hCG_1642624A0A1W2PR95 340 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 POSTNQ15063 836 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 IQCA1Q86XH1 822 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
CDRT1-203ENST00000395667 ENAHQ8N8S7 591 aaPredicted RBP10.6□□□□□ -0.71
CDRT1-203ENST00000395667 KIF18AQ8NI77 898 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 ZSCAN10Q96SZ4 725 aaPredicted RBP10.6□□□□□ -0.71
CDRT1-203ENST00000395667 RNF26Q9BY78 433 aaPredicted RBP10.6□□□□□ -0.71
CDRT1-203ENST00000395667 VPS54Q9P1Q0 977 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 ANAPC4Q9UJX5 808 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 MINPP1Q9UNW1 487 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 KCNQ4P56696 695 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 NCBP1Q09161 790 aaKnown RBP10.6□□□□□ -0.71
CDRT1-203ENST00000395667 PPP2R5BQ15173 497 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 SEC23AQ15436 765 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 RIOK1Q9BRS2 568 aaKnown RBP10.6□□□□□ -0.71
CDRT1-203ENST00000395667 HSD3B7Q9H2F3 369 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 FANCLQ9NW38 375 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 SERTAD1Q9UHV2 236 aa10.6□□□□□ -0.71
CDRT1-203ENST00000395667 MYH2Q9UKX2 1941 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms