RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 EAPPQ56P03 285 aaPredicted RBP17.78■□□□□ 0.44
SCAF11-204ENST00000395454 SDR42E1Q8WUS8 393 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 CRNKL1Q9BZJ0 848 aaKnown RBP17.78■□□□□ 0.44
SCAF11-204ENST00000395454 NMRK2Q9NPI5 230 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 TMOD2Q9NZR1 351 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 SLC4A4Q9Y6R1 1079 aa17.78■□□□□ 0.44
SCAF11-204ENST00000395454 PRKAB2O43741 272 aa17.77■□□□□ 0.44
SCAF11-204ENST00000395454 USP5P45974 858 aa17.77■□□□□ 0.44
SCAF11-204ENST00000395454 TMEM87AQ8NBN3 555 aa17.77■□□□□ 0.44
SCAF11-204ENST00000395454 TGFBRAP1Q8WUH2 860 aa17.77■□□□□ 0.44
SCAF11-204ENST00000395454 LLPHQ9BRT6 129 aaKnown RBP17.77■□□□□ 0.44
SCAF11-204ENST00000395454 MTMR6Q9Y217 621 aa17.77■□□□□ 0.44
SCAF11-204ENST00000395454 ASTN2O75129 1339 aaPredicted RBP17.77■□□□□ 0.44
SCAF11-204ENST00000395454 ECM29Q5VYK3 1845 aa17.76■□□□□ 0.43
SCAF11-204ENST00000395454 ZNF213O14771 459 aa17.76■□□□□ 0.43
SCAF11-204ENST00000395454 APPP05067 770 aa17.76■□□□□ 0.43
SCAF11-204ENST00000395454 GNAT2P19087 354 aa17.76■□□□□ 0.43
SCAF11-204ENST00000395454 PDCP20941 246 aa17.76■□□□□ 0.43
SCAF11-204ENST00000395454 PICALMQ13492 652 aa17.76■□□□□ 0.43
SCAF11-204ENST00000395454 SPDYE2Q495Y8 402 aa17.76■□□□□ 0.43
SCAF11-204ENST00000395454 USP50Q70EL3 339 aaPredicted RBP17.76■□□□□ 0.43
SCAF11-204ENST00000395454 BRF1Q92994 677 aa17.76■□□□□ 0.43
SCAF11-204ENST00000395454 ZNF274Q96GC6 653 aaPredicted RBP17.76■□□□□ 0.43
SCAF11-204ENST00000395454 ZNF70Q9UC06 446 aaPredicted RBP17.76■□□□□ 0.43
SCAF11-204ENST00000395454 PATL2C9JE40 543 aaKnown RBP17.76■□□□□ 0.43
SCAF11-204ENST00000395454 NFIAQ12857 509 aa17.76■□□□□ 0.43
SCAF11-204ENST00000395454 PNMA8AQ86V59 439 aaPredicted RBP17.76■□□□□ 0.43
SCAF11-204ENST00000395454 SMARCC2Q8TAQ2 1214 aa17.76■□□□□ 0.43
SCAF11-204ENST00000395454 SCAF8Q9UPN6 1271 aaKnown RBP17.76■□□□□ 0.43
SCAF11-204ENST00000395454 FSD2A1L4K1 749 aa17.75■□□□□ 0.43
SCAF11-204ENST00000395454 TCP10L2B9ZVM9 353 aa17.75■□□□□ 0.43
SCAF11-204ENST00000395454 WDHD1O75717 1129 aaPredicted RBP17.75■□□□□ 0.43
SCAF11-204ENST00000395454 F13A1P00488 732 aa17.75■□□□□ 0.43
SCAF11-204ENST00000395454 ANGEL2Q5VTE6 544 aaKnown RBP17.75■□□□□ 0.43
SCAF11-204ENST00000395454 MAPKAPK5Q8IW41 473 aa17.75■□□□□ 0.43
SCAF11-204ENST00000395454 NCOA7Q8NI08 942 aa17.75■□□□□ 0.43
SCAF11-204ENST00000395454 GPBP1L1Q9HC44 474 aaPredicted RBP17.75■□□□□ 0.43
SCAF11-204ENST00000395454 EPB41L4AQ9HCS5 686 aaPredicted RBP17.75■□□□□ 0.43
SCAF11-204ENST00000395454 GGA3Q9NZ52 723 aa17.75■□□□□ 0.43
SCAF11-204ENST00000395454 ISY1Q9ULR0 285 aaKnown RBP17.75■□□□□ 0.43
SCAF11-204ENST00000395454 CDK5RAP2Q96SN8 1893 aa17.75■□□□□ 0.43
SCAF11-204ENST00000395454 YY1P25490 414 aa17.74■□□□□ 0.43
SCAF11-204ENST00000395454 MCM5P33992 734 aa17.74■□□□□ 0.43
SCAF11-204ENST00000395454 TCP10Q12799 353 aa17.74■□□□□ 0.43
SCAF11-204ENST00000395454 CHMP4CQ96CF2 233 aa17.74■□□□□ 0.43
SCAF11-204ENST00000395454 GSG1L2A8MUP6 293 aa17.74■□□□□ 0.43
SCAF11-204ENST00000395454 DDX4Q9NQI0 724 aaKnown RBP17.74■□□□□ 0.43
SCAF11-204ENST00000395454 ATP6V1DQ9Y5K8 247 aa17.74■□□□□ 0.43
SCAF11-204ENST00000395454 FLT1P17948 1338 aa17.74■□□□□ 0.43
SCAF11-204ENST00000395454 ANTXR2P58335 489 aa17.73■□□□□ 0.43
SCAF11-204ENST00000395454 HAND2P61296 217 aa17.73■□□□□ 0.43
SCAF11-204ENST00000395454 SCRN1Q12765 414 aa17.73■□□□□ 0.43
SCAF11-204ENST00000395454 TBC1D10CQ8IV04 446 aa17.73■□□□□ 0.43
SCAF11-204ENST00000395454 IDI2Q9BXS1 227 aa17.73■□□□□ 0.43
SCAF11-204ENST00000395454 NACAP1Q9BZK3 213 aa17.73■□□□□ 0.43
SCAF11-204ENST00000395454 DCP1AQ9NPI6 582 aaPredicted RBP17.73■□□□□ 0.43
SCAF11-204ENST00000395454 ATP8A2Q9NTI2 1148 aa17.73■□□□□ 0.43
SCAF11-204ENST00000395454 POLR2AP24928 1970 aaKnown RBP17.73■□□□□ 0.43
SCAF11-204ENST00000395454 BAZ2AQ9UIF9 1905 aaKnown RBP17.73■□□□□ 0.43
SCAF11-204ENST00000395454 FOCADQ5VW36 1801 aa17.73■□□□□ 0.43
SCAF11-204ENST00000395454 TDO2P48775 406 aa17.72■□□□□ 0.43
SCAF11-204ENST00000395454 IFNL3Q8IZI9 196 aa17.72■□□□□ 0.43
SCAF11-204ENST00000395454 LRRC2Q9BYS8 371 aa17.72■□□□□ 0.43
SCAF11-204ENST00000395454 FAM198AQ9UFP1 575 aa17.72■□□□□ 0.43
SCAF11-204ENST00000395454 CLEC11AQ9Y240 323 aa17.72■□□□□ 0.43
SCAF11-204ENST00000395454 POTEIP0CG38 1075 aa17.72■□□□□ 0.43
SCAF11-204ENST00000395454 POTEJP0CG39 1038 aa17.72■□□□□ 0.43
SCAF11-204ENST00000395454 TNFAIP1Q13829 316 aa17.72■□□□□ 0.43
SCAF11-204ENST00000395454 SLC4A8Q2Y0W8 1093 aa17.72■□□□□ 0.43
SCAF11-204ENST00000395454 DCPSQ96C86 337 aaKnown RBP17.72■□□□□ 0.43
SCAF11-204ENST00000395454 NAPBQ9H115 298 aa17.72■□□□□ 0.43
SCAF11-204ENST00000395454 DDX49Q9Y6V7 483 aaKnown RBP17.72■□□□□ 0.43
SCAF11-204ENST00000395454 PDIA3P30101 505 aaKnown RBP17.71■□□□□ 0.43
SCAF11-204ENST00000395454 APOBRQ0VD83 1088 aa17.71■□□□□ 0.43
SCAF11-204ENST00000395454 APOBEC3FQ8IUX4 373 aaKnown RBP17.71■□□□□ 0.43
SCAF11-204ENST00000395454 ZC3H15Q8WU90 426 aaKnown RBP17.71■□□□□ 0.43
SCAF11-204ENST00000395454 CHAMP1Q96JM3 812 aa17.71■□□□□ 0.43
SCAF11-204ENST00000395454 MCM9Q9NXL9 1143 aa17.71■□□□□ 0.43
SCAF11-204ENST00000395454 SAP30BPQ9UHR5 308 aaKnown RBP17.71■□□□□ 0.43
SCAF11-204ENST00000395454 NAV1Q8NEY1 1877 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 PRC1O43663 620 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 PRPF40AO75400 957 aaKnown RBP17.7■□□□□ 0.42
SCAF11-204ENST00000395454 MBD3O95983 291 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 TNNI2P48788 182 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 FGD1P98174 961 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 FOXD4L5Q5VV16 416 aaPredicted RBP17.7■□□□□ 0.42
SCAF11-204ENST00000395454 FKBP1CQ5VVH2 108 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
SCAF11-204ENST00000395454 RALYLQ86SE5 291 aaKnown RBP17.7■□□□□ 0.42
SCAF11-204ENST00000395454 ZSCAN29Q8IWY8 852 aaPredicted RBP17.7■□□□□ 0.42
SCAF11-204ENST00000395454 NSUN7Q8NE18 718 aaKnown RBP17.7■□□□□ 0.42
SCAF11-204ENST00000395454 FOXD4L4Q8WXT5 416 aaPredicted RBP17.7■□□□□ 0.42
SCAF11-204ENST00000395454 OSBPL5Q9H0X9 879 aaPredicted RBP17.7■□□□□ 0.42
SCAF11-204ENST00000395454 CTDNEP1O95476 244 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 HMGN5P82970 282 aaKnown RBP17.7■□□□□ 0.42
SCAF11-204ENST00000395454 STK3Q13188 491 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 RASA3Q14644 834 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 ZFPM1Q8IX07 1006 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 GPT2Q8TD30 523 aa17.7■□□□□ 0.42
SCAF11-204ENST00000395454 TMEM39BQ9GZU3 492 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms