RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 FTSJ3Q8IY81 847 aaKnown RBP16.67■□□□□ 0.26
SCAF11-203ENST00000395453 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.67■□□□□ 0.26
SCAF11-203ENST00000395453 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
SCAF11-203ENST00000395453 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
SCAF11-203ENST00000395453 ATRNL1Q5VV63 1379 aa16.66■□□□□ 0.26
SCAF11-203ENST00000395453 ADGRA2Q96PE1 1338 aa16.66■□□□□ 0.26
SCAF11-203ENST00000395453 GPR75-ASB3A0A0A6YYF3 556 aa16.66■□□□□ 0.26
SCAF11-203ENST00000395453 RGS3P49796 1198 aa16.66■□□□□ 0.26
SCAF11-203ENST00000395453 MNX1P50219 401 aaPredicted RBP16.66■□□□□ 0.26
SCAF11-203ENST00000395453 PI16Q6UXB8 463 aa16.66■□□□□ 0.26
SCAF11-203ENST00000395453 ERICH6Q7L0X2 663 aa16.66■□□□□ 0.26
SCAF11-203ENST00000395453 SLAIN1Q8ND83 568 aa16.66■□□□□ 0.26
SCAF11-203ENST00000395453 MROH7-TTC4A0A0A0MT08 1334 aa16.65■□□□□ 0.26
SCAF11-203ENST00000395453 SGPL1O95470 568 aa16.65■□□□□ 0.26
SCAF11-203ENST00000395453 UQCRFS1P1P0C7P4 283 aa16.65■□□□□ 0.26
SCAF11-203ENST00000395453 MCAMP43121 646 aa16.65■□□□□ 0.26
SCAF11-203ENST00000395453 FCGRTP55899 365 aa16.65■□□□□ 0.26
SCAF11-203ENST00000395453 NOL9Q5SY16 702 aaKnown RBP16.65■□□□□ 0.26
SCAF11-203ENST00000395453 SH3BP5LQ7L8J4 393 aa16.65■□□□□ 0.26
SCAF11-203ENST00000395453 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
SCAF11-203ENST00000395453 NSUN4Q96CB9 384 aaKnown RBP16.65■□□□□ 0.26
SCAF11-203ENST00000395453 KCNH4Q9UQ05 1017 aa16.65■□□□□ 0.26
SCAF11-203ENST00000395453 PHF20L1A8MW92 1017 aa16.64■□□□□ 0.25
SCAF11-203ENST00000395453 SOX1O00570 391 aaPredicted RBP16.64■□□□□ 0.25
SCAF11-203ENST00000395453 SURF6O75683 361 aaKnown RBP16.64■□□□□ 0.25
SCAF11-203ENST00000395453 MAP4K4O95819 1239 aaPredicted RBP16.64■□□□□ 0.25
SCAF11-203ENST00000395453 BTDP43251 543 aa16.64■□□□□ 0.25
SCAF11-203ENST00000395453 RHBDL3P58872 404 aa16.64■□□□□ 0.25
SCAF11-203ENST00000395453 PRKCZQ05513 592 aa16.64■□□□□ 0.25
SCAF11-203ENST00000395453 TNNI3KQ59H18 835 aa16.64■□□□□ 0.25
SCAF11-203ENST00000395453 TBC1D9Q6ZT07 1266 aa16.64■□□□□ 0.25
SCAF11-203ENST00000395453 LRCH3Q96II8 777 aa16.64■□□□□ 0.25
SCAF11-203ENST00000395453 PARK7Q99497 189 aaKnown RBP16.64■□□□□ 0.25
SCAF11-203ENST00000395453 UNC93B1Q9H1C4 597 aa16.64■□□□□ 0.25
SCAF11-203ENST00000395453 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
SCAF11-203ENST00000395453 DDX4Q9NQI0 724 aaKnown RBP16.64■□□□□ 0.25
SCAF11-203ENST00000395453 FPGT-TNNI3KV9GXZ4 949 aa16.64■□□□□ 0.25
SCAF11-203ENST00000395453 LDHCP07864 332 aa16.63■□□□□ 0.25
SCAF11-203ENST00000395453 STAP2Q9UGK3 403 aa16.63■□□□□ 0.25
SCAF11-203ENST00000395453 DDTLA6NHG4 134 aaPredicted RBP16.62■□□□□ 0.25
SCAF11-203ENST00000395453 TFRCP02786 760 aaKnown RBP16.62■□□□□ 0.25
SCAF11-203ENST00000395453 GSTO1P78417 241 aa16.62■□□□□ 0.25
SCAF11-203ENST00000395453 LHX8Q68G74 356 aa16.62■□□□□ 0.25
SCAF11-203ENST00000395453 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
SCAF11-203ENST00000395453 DBNDD2Q9BQY9 259 aa16.62■□□□□ 0.25
SCAF11-203ENST00000395453 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
SCAF11-203ENST00000395453 ADCY3O60266 1144 aa16.61■□□□□ 0.25
SCAF11-203ENST00000395453 BCRP11274 1271 aa16.61■□□□□ 0.25
SCAF11-203ENST00000395453 OS9Q13438 667 aaPredicted RBP16.61■□□□□ 0.25
SCAF11-203ENST00000395453 MOGSQ13724 837 aa16.61■□□□□ 0.25
SCAF11-203ENST00000395453 GPR153Q6NV75 609 aa16.61■□□□□ 0.25
SCAF11-203ENST00000395453 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
SCAF11-203ENST00000395453 PANK1Q8TE04 598 aa16.61■□□□□ 0.25
SCAF11-203ENST00000395453 GABRQQ9UN88 632 aa16.61■□□□□ 0.25
SCAF11-203ENST00000395453 CXCL11O14625 94 aa16.6■□□□□ 0.25
SCAF11-203ENST00000395453 CCDC158Q5M9N0 1113 aa16.6■□□□□ 0.25
SCAF11-203ENST00000395453 RAI14Q9P0K7 980 aa16.6■□□□□ 0.25
SCAF11-203ENST00000395453 LRP2BPQ9P2M1 347 aa16.6■□□□□ 0.25
SCAF11-203ENST00000395453 TBC1D12O60347 775 aa16.59■□□□□ 0.25
SCAF11-203ENST00000395453 IGSF3O75054 1194 aa16.59■□□□□ 0.25
SCAF11-203ENST00000395453 INHAP05111 366 aa16.59■□□□□ 0.25
SCAF11-203ENST00000395453 CYP2E1P05181 493 aaPredicted RBP16.59■□□□□ 0.25
SCAF11-203ENST00000395453 CYP2C8P10632 490 aa16.59■□□□□ 0.25
SCAF11-203ENST00000395453 PICALMQ13492 652 aa16.59■□□□□ 0.25
SCAF11-203ENST00000395453 TTC39AQ5SRH9 613 aa16.59■□□□□ 0.25
SCAF11-203ENST00000395453 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
SCAF11-203ENST00000395453 PXYLP1Q8TE99 480 aa16.59■□□□□ 0.25
SCAF11-203ENST00000395453 DEFB118Q96PH6 123 aa16.59■□□□□ 0.25
SCAF11-203ENST00000395453 SNRKQ9NRH2 765 aa16.59■□□□□ 0.25
SCAF11-203ENST00000395453 CTNND1O60716 968 aaKnown RBP16.58■□□□□ 0.24
SCAF11-203ENST00000395453 SLURP2P0DP57 97 aa16.58■□□□□ 0.24
SCAF11-203ENST00000395453 MS4A1P11836 297 aa16.58■□□□□ 0.24
SCAF11-203ENST00000395453 PTPRAP18433 802 aa16.58■□□□□ 0.24
SCAF11-203ENST00000395453 BMP8BP34820 402 aa16.58■□□□□ 0.24
SCAF11-203ENST00000395453 FLT3LGP49771 235 aa16.58■□□□□ 0.24
SCAF11-203ENST00000395453 IRF5Q13568 498 aa16.58■□□□□ 0.24
SCAF11-203ENST00000395453 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
SCAF11-203ENST00000395453 SCYL3Q8IZE3 742 aa16.58■□□□□ 0.24
SCAF11-203ENST00000395453 EAF2Q96CJ1 260 aaPredicted RBP16.58■□□□□ 0.24
SCAF11-203ENST00000395453 DBNLQ9UJU6 430 aaKnown RBP16.58■□□□□ 0.24
SCAF11-203ENST00000395453 COL2A1P02458 1487 aaPredicted RBP16.58■□□□□ 0.24
SCAF11-203ENST00000395453 ELNP15502 786 aa16.57■□□□□ 0.24
SCAF11-203ENST00000395453 PPP4CP60510 307 aa16.57■□□□□ 0.24
SCAF11-203ENST00000395453 FASTKD5Q7L8L6 764 aaKnown RBP16.57■□□□□ 0.24
SCAF11-203ENST00000395453 DEFB123Q8N688 67 aa16.57■□□□□ 0.24
SCAF11-203ENST00000395453 PAWRQ96IZ0 340 aaKnown RBP16.57■□□□□ 0.24
SCAF11-203ENST00000395453 PAK6Q9NQU5 681 aaPredicted RBP16.57■□□□□ 0.24
SCAF11-203ENST00000395453 AFG3L2Q9Y4W6 797 aa16.57■□□□□ 0.24
SCAF11-203ENST00000395453 ZHX2Q9Y6X8 837 aa16.57■□□□□ 0.24
SCAF11-203ENST00000395453 MGAMO43451 1857 aa16.57■□□□□ 0.24
SCAF11-203ENST00000395453 MYO5AQ9Y4I1 1855 aaKnown RBP16.56■□□□□ 0.24
SCAF11-203ENST00000395453 TNPO2O14787 897 aaKnown RBP16.56■□□□□ 0.24
SCAF11-203ENST00000395453 ZAP70P43403 619 aa16.56■□□□□ 0.24
SCAF11-203ENST00000395453 NAA16Q6N069 864 aaPredicted RBP16.56■□□□□ 0.24
SCAF11-203ENST00000395453 NECAB2Q7Z6G3 386 aa16.56■□□□□ 0.24
SCAF11-203ENST00000395453 GDF15Q99988 308 aa16.56■□□□□ 0.24
SCAF11-203ENST00000395453 CRISPLD2Q9H0B8 497 aa16.56■□□□□ 0.24
SCAF11-203ENST00000395453 CCDC8Q9H0W5 538 aaPredicted RBP16.56■□□□□ 0.24
SCAF11-203ENST00000395453 OSBPL5Q9H0X9 879 aaPredicted RBP16.56■□□□□ 0.24
SCAF11-203ENST00000395453 PICK1Q9NRD5 415 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms