RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 PLEKHH2Q8IVE3 1493 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 SLC12A2P55011 1212 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 OTUD7BQ6GQQ9 843 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 IFNL2Q8IZJ0 200 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 AFAP1L2Q8N4X5 818 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 TAB2Q9NYJ8 693 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 LIN9Q5TKA1 542 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 METTL13Q8N6R0 699 aa13.62□□□□□ -0.23
SIN3A-202ENST00000394947 NCOA5Q9HCD5 579 aaKnown RBP13.62□□□□□ -0.23
SIN3A-202ENST00000394947 ESYT2A0FGR8 921 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 PRPF6O94906 941 aaKnown RBP13.61□□□□□ -0.23
SIN3A-202ENST00000394947 GSTA1P08263 222 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 GSTA2P09210 222 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 TBC1D10BQ4KMP7 808 aaPredicted RBP13.61□□□□□ -0.23
SIN3A-202ENST00000394947 MYCT1Q8N699 235 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 SEPT8Q92599 483 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 SNRPA1P09661 255 aaKnown RBP13.61□□□□□ -0.23
SIN3A-202ENST00000394947 ATP1A2P50993 1020 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 UBL4BQ8N7F7 174 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 NAP1L4Q99733 375 aaKnown RBP13.61□□□□□ -0.23
SIN3A-202ENST00000394947 ZC3H12CQ9C0D7 883 aaKnown RBP13.61□□□□□ -0.23
SIN3A-202ENST00000394947 OLA1Q9NTK5 396 aaKnown RBP13.61□□□□□ -0.23
SIN3A-202ENST00000394947 FNDC3AQ9Y2H6 1198 aaKnown RBP13.61□□□□□ -0.23
SIN3A-202ENST00000394947 RTL9Q8NET4 1388 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 TSNAXIP1Q2TAA8 658 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 NDUFB9Q9Y6M9 179 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 COBLO75128 1261 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 ABCB4P21439 1286 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 CREB3L3Q68CJ9 461 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 JADE1Q6IE81 842 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 NSMCE1Q8WV22 266 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 GBP5Q96PP8 586 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 RIOK1Q9BRS2 568 aaKnown RBP13.61□□□□□ -0.23
SIN3A-202ENST00000394947 ARMT1Q9H993 441 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 ATAD2Q6PL18 1390 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 LDHBP07195 334 aaKnown RBP13.61□□□□□ -0.23
SIN3A-202ENST00000394947 HELLSQ9NRZ9 838 aa13.61□□□□□ -0.23
SIN3A-202ENST00000394947 AQRO60306 1485 aaKnown RBP eCLIP13.6□□□□□ -0.235e-7■■■■■ 32.2
SIN3A-202ENST00000394947 PIK3R4Q99570 1358 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 MYCP01106 439 aaPredicted RBP13.6□□□□□ -0.23
SIN3A-202ENST00000394947 PAGR1Q9BTK6 254 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 ZBBXA8MT70 800 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 CDR2Q01850 454 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 FAM47CQ5HY64 1035 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 TYW1BQ6NUM6 668 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 PARD3BQ8TEW8 1205 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 VCXQ9H320 206 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.6□□□□□ -0.23
SIN3A-202ENST00000394947 CCDC125Q86Z20 511 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 TRMT44Q8IYL2 757 aaKnown RBP13.6□□□□□ -0.23
SIN3A-202ENST00000394947 PARP3Q9Y6F1 533 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 A0A1B0GUA9 196 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 RPSAP08865 295 aaKnown RBP13.6□□□□□ -0.23
SIN3A-202ENST00000394947 SERPINB6P35237 376 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 CTDSPL2Q05D32 466 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 DZIP3Q86Y13 1208 aaKnown RBP13.6□□□□□ -0.23
SIN3A-202ENST00000394947 AMOTL2Q9Y2J4 779 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 FANCD2Q9BXW9 1451 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 CALUO43852 315 aaPredicted RBP13.6□□□□□ -0.23
SIN3A-202ENST00000394947 PRDM1O75626 825 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 NUCB1Q02818 461 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 FAM173BQ6P4H8 233 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 TMTC2Q8N394 836 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 MCUQ8NE86 351 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 CSRNP2Q9H175 543 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 PICK1Q9NRD5 415 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 ZKSCAN5Q9Y2L8 839 aa13.6□□□□□ -0.23
SIN3A-202ENST00000394947 MBD4O95243 580 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 KRT81Q14533 505 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 B4GALNT4Q76KP1 1039 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 PALM2Q8IXS6 379 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 CCDC13Q8IYE1 715 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 MICAL1Q8TDZ2 1067 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 ZNF653Q96CK0 615 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 BUB1O43683 1085 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 GNAQP50148 359 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 SMTNP53814 917 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
SIN3A-202ENST00000394947 MRPL44Q9H9J2 332 aaKnown RBP13.59□□□□□ -0.23
SIN3A-202ENST00000394947 SYNRGQ9UMZ2 1314 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 PDE1AP54750 535 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 ZBTB41Q5SVQ8 909 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 KRT12Q99456 494 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 RIPOR2Q9Y4F9 1068 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 IFNB1P01574 187 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 OATP04181 439 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 RILPL1Q5EBL4 403 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 SLF1Q9BQI6 1058 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 OGFRQ9NZT2 677 aa13.59□□□□□ -0.23
SIN3A-202ENST00000394947 ARHGEF35A5YM69 484 aa13.58□□□□□ -0.23
SIN3A-202ENST00000394947 ACTN4O43707 911 aaKnown RBP13.58□□□□□ -0.23
SIN3A-202ENST00000394947 OAS2P29728 719 aaKnown RBP13.58□□□□□ -0.23
SIN3A-202ENST00000394947 CSGALNACT2Q8N6G5 542 aa13.58□□□□□ -0.23
SIN3A-202ENST00000394947 RSAD2Q8WXG1 361 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms