RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TRIM28Q13263 835 aaKnown RBP21.46■■□□□ 1.03
HOXC6-202ENST00000394331 CFAP100Q494V2 611 aa21.46■■□□□ 1.03
HOXC6-202ENST00000394331 E7EWF7 191 aa21.45■■□□□ 1.03
HOXC6-202ENST00000394331 KCNG4Q8TDN1 519 aa21.45■■□□□ 1.03
HOXC6-202ENST00000394331 DPF2Q92785 391 aa21.45■■□□□ 1.03
HOXC6-202ENST00000394331 FBXW7Q969H0 707 aa21.45■■□□□ 1.03
HOXC6-202ENST00000394331 RNF40O75150 1001 aa21.45■■□□□ 1.02
HOXC6-202ENST00000394331 TUBE1Q9UJT0 475 aa21.45■■□□□ 1.02
HOXC6-202ENST00000394331 ANKRD65E5RJM6 399 aa21.45■■□□□ 1.02
HOXC6-202ENST00000394331 TOGARAM2Q6ZUX3 1019 aa21.45■■□□□ 1.02
HOXC6-202ENST00000394331 ZNF274Q96GC6 653 aaPredicted RBP21.45■■□□□ 1.02
HOXC6-202ENST00000394331 PUS3Q9BZE2 481 aaKnown RBP21.45■■□□□ 1.02
HOXC6-202ENST00000394331 TJP1Q07157 1748 aa21.44■■□□□ 1.02
HOXC6-202ENST00000394331 YEATS4O95619 227 aa21.44■■□□□ 1.02
HOXC6-202ENST00000394331 ZFYP08048 801 aaPredicted RBP21.44■■□□□ 1.02
HOXC6-202ENST00000394331 TTLL5Q6EMB2 1281 aa21.44■■□□□ 1.02
HOXC6-202ENST00000394331 PRPF38AQ8NAV1 312 aaKnown RBP21.44■■□□□ 1.02
HOXC6-202ENST00000394331 TEX13AQ9BXU3 409 aaPredicted RBP21.44■■□□□ 1.02
HOXC6-202ENST00000394331 SOS2Q07890 1332 aaPredicted RBP21.44■■□□□ 1.02
HOXC6-202ENST00000394331 SETQ01105 290 aaPredicted RBP21.44■■□□□ 1.02
HOXC6-202ENST00000394331 SPEF2Q9C093 1822 aa21.44■■□□□ 1.02
HOXC6-202ENST00000394331 SALL1Q9NSC2 1324 aa21.43■■□□□ 1.02
HOXC6-202ENST00000394331 A0A1B0GVL5 298 aa21.43■■□□□ 1.02
HOXC6-202ENST00000394331 PTPDC1A2A3K4 754 aa21.43■■□□□ 1.02
HOXC6-202ENST00000394331 ILDR1Q86SU0 546 aaPredicted RBP21.43■■□□□ 1.02
HOXC6-202ENST00000394331 VSNL1P62760 191 aa21.43■■□□□ 1.02
HOXC6-202ENST00000394331 TTC39AQ5SRH9 613 aa21.43■■□□□ 1.02
HOXC6-202ENST00000394331 FBXL16Q8N461 479 aa21.43■■□□□ 1.02
HOXC6-202ENST00000394331 TC2NQ8N9U0 490 aa21.43■■□□□ 1.02
HOXC6-202ENST00000394331 SYF2O95926 243 aaKnown RBP21.42■■□□□ 1.02
HOXC6-202ENST00000394331 CCDC175P0C221 793 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 SF3B2Q13435 895 aaKnown RBP21.42■■□□□ 1.02
HOXC6-202ENST00000394331 LINC00301Q8NCQ3 95 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 PAPPAQ13219 1627 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 LRRIQ3A6PVS8 624 aaPredicted RBP21.42■■□□□ 1.02
HOXC6-202ENST00000394331 EBAG9O00559 213 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 FKBP4Q02790 459 aaKnown RBP eCLIP21.42■■□□□ 1.02
HOXC6-202ENST00000394331 WHAMMP3Q1A5X7 153 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 PLA2G12BQ9BX93 195 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 TMOD3Q9NYL9 352 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 FAM169AQ9Y6X4 670 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 PPP1R12AO14974 1030 aaPredicted RBP21.42■■□□□ 1.02
HOXC6-202ENST00000394331 CTDNEP1O95476 244 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 PCCAP05165 728 aaPredicted RBP21.42■■□□□ 1.02
HOXC6-202ENST00000394331 PIP4K2BP78356 416 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 SUGCTQ9HAC7 445 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 POLR3EQ9NVU0 708 aa21.42■■□□□ 1.02
HOXC6-202ENST00000394331 CDHR2Q9BYE9 1310 aa21.41■■□□□ 1.02
HOXC6-202ENST00000394331 KIF6Q6ZMV9 814 aa21.41■■□□□ 1.02
HOXC6-202ENST00000394331 GNL3LQ9NVN8 582 aaKnown RBP21.41■■□□□ 1.02
HOXC6-202ENST00000394331 M0R2C6 588 aa21.41■■□□□ 1.02
HOXC6-202ENST00000394331 MCM3P25205 808 aa21.41■■□□□ 1.02
HOXC6-202ENST00000394331 EVA1CP58658 441 aa21.41■■□□□ 1.02
HOXC6-202ENST00000394331 XAGE2Q96GT9 111 aa21.41■■□□□ 1.02
HOXC6-202ENST00000394331 ZNF202O95125 648 aa21.4■■□□□ 1.02
HOXC6-202ENST00000394331 PDIA3P30101 505 aaKnown RBP21.4■■□□□ 1.02
HOXC6-202ENST00000394331 HSP90AB3PQ58FF7 597 aa21.4■■□□□ 1.02
HOXC6-202ENST00000394331 EGFL6Q8IUX8 553 aa21.4■■□□□ 1.02
HOXC6-202ENST00000394331 OSBP2Q969R2 916 aa21.4■■□□□ 1.02
HOXC6-202ENST00000394331 INTS13Q9NVM9 706 aa21.4■■□□□ 1.02
HOXC6-202ENST00000394331 RAI14Q9P0K7 980 aa21.4■■□□□ 1.02
HOXC6-202ENST00000394331 KIF3CO14782 793 aa21.4■■□□□ 1.02
HOXC6-202ENST00000394331 LIG3P49916 1009 aa21.4■■□□□ 1.02
HOXC6-202ENST00000394331 CCT2P78371 535 aaKnown RBP21.4■■□□□ 1.02
HOXC6-202ENST00000394331 ABCC12Q96J65 1359 aa21.4■■□□□ 1.02
HOXC6-202ENST00000394331 KIF5CO60282 957 aa21.39■■□□□ 1.02
HOXC6-202ENST00000394331 TBC1D22AQ8WUA7 517 aa21.39■■□□□ 1.02
HOXC6-202ENST00000394331 NAA15Q9BXJ9 866 aaKnown RBP21.39■■□□□ 1.02
HOXC6-202ENST00000394331 PUF60Q9UHX1 559 aaKnown RBP21.39■■□□□ 1.02
HOXC6-202ENST00000394331 TMEM232C9JQI7 657 aa21.39■■□□□ 1.01
HOXC6-202ENST00000394331 CALRP27797 417 aaKnown RBP21.39■■□□□ 1.01
HOXC6-202ENST00000394331 IFIT5Q13325 482 aaKnown RBP21.39■■□□□ 1.01
HOXC6-202ENST00000394331 IMMTQ16891 758 aaKnown RBP21.39■■□□□ 1.01
HOXC6-202ENST00000394331 KIF4BQ2VIQ3 1234 aa21.39■■□□□ 1.01
HOXC6-202ENST00000394331 SPECC1LQ69YQ0 1117 aa21.39■■□□□ 1.01
HOXC6-202ENST00000394331 GBP6Q6ZN66 633 aa21.39■■□□□ 1.01
HOXC6-202ENST00000394331 ZBTB38Q8NAP3 1195 aaPredicted RBP21.39■■□□□ 1.01
HOXC6-202ENST00000394331 CABS1Q96KC9 395 aa21.39■■□□□ 1.01
HOXC6-202ENST00000394331 MRPL44Q9H9J2 332 aaKnown RBP21.39■■□□□ 1.01
HOXC6-202ENST00000394331 STRN4Q9NRL3 753 aa21.39■■□□□ 1.01
HOXC6-202ENST00000394331 CSF1RP07333 972 aa21.39■■□□□ 1.01
HOXC6-202ENST00000394331 GPTP24298 496 aa21.39■■□□□ 1.01
HOXC6-202ENST00000394331 WASHC4Q2M389 1173 aa21.39■■□□□ 1.01
HOXC6-202ENST00000394331 ZNF330Q9Y3S2 320 aaPredicted RBP21.39■■□□□ 1.01
HOXC6-202ENST00000394331 CTAGE15A4D2H0 777 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 BIN1O00499 593 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 PHACTR2O75167 634 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 CTAGE8P0CG41 777 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 CMA1P23946 247 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 MAP9Q49MG5 647 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 WWC2Q6AWC2 1192 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 CTAGE6Q86UF2 777 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 CTAGE4Q8IX94 777 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 PANX2Q96RD6 677 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 PLEKHA4Q9H4M7 779 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 ZSWIM4Q9H7M6 989 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 GOLGA8FQ08AF8 430 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 GOLGA8DPQ0D2H9 430 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 NEDD9Q14511 834 aa21.38■■□□□ 1.01
HOXC6-202ENST00000394331 SMARCC1Q92922 1105 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms