RNA–Protein interactions for RNA: ENST00000394327.2

NUP58-204, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-204ENST00000394327 LRRFIP2Q9Y608 721 aaKnown RBP7.79□□□□□ -1.16
NUP58-204ENST00000394327 USP3Q9Y6I4 520 aa7.79□□□□□ -1.16
NUP58-204ENST00000394327 RTL9Q8NET4 1388 aa7.79□□□□□ -1.16
NUP58-204ENST00000394327 ABCC12Q96J65 1359 aa7.79□□□□□ -1.16
NUP58-204ENST00000394327 C10orf71Q711Q0 1435 aa7.79□□□□□ -1.16
NUP58-204ENST00000394327 FAM196BA6NMK8 535 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 HMMRO75330 724 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 LGR5O75473 907 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 ATG7O95352 703 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 GNRH1P01148 92 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 GDF10P55107 478 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 CTSWP56202 376 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 MTX1Q13505 466 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 RABL6Q3YEC7 729 aaPredicted RBP7.78□□□□□ -1.16
NUP58-204ENST00000394327 FOXD4L5Q5VV16 416 aaPredicted RBP7.78□□□□□ -1.16
NUP58-204ENST00000394327 CCDC102BQ68D86 513 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 CYP2U1Q7Z449 544 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 RPAP2Q8IXW5 612 aaPredicted RBP7.78□□□□□ -1.16
NUP58-204ENST00000394327 SIX5Q8N196 739 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 TPCN2Q8NHX9 752 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 SUCLG2Q96I99 432 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 NLRP3Q96P20 1036 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 BRIP1Q9BX63 1249 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 SPON1Q9HCB6 807 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 ZNF358Q9NW07 568 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 GMPR2Q9P2T1 348 aaKnown RBP7.78□□□□□ -1.16
NUP58-204ENST00000394327 LRRC37AA6NMS7 1700 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 MYH13Q9UKX3 1938 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 PDE6BP35913 854 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 DPYDQ12882 1025 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 CCDC152Q4G0S7 254 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 LARGE2Q8N3Y3 721 aa7.78□□□□□ -1.16
NUP58-204ENST00000394327 TSEN34Q9BSV6 310 aaKnown RBP7.78□□□□□ -1.16
NUP58-204ENST00000394327 FHDC1Q9C0D6 1143 aaPredicted RBP7.78□□□□□ -1.16
NUP58-204ENST00000394327 BICC1Q9H694 974 aaKnown RBP7.78□□□□□ -1.16
NUP58-204ENST00000394327 SOBPA7XYQ1 873 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 INHAP05111 366 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 CSF1RP07333 972 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 HCLS1P14317 486 aaPredicted RBP7.77□□□□□ -1.17
NUP58-204ENST00000394327 FOXO4P98177 505 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 SF3B3Q15393 1217 aaKnown RBP7.77□□□□□ -1.17
NUP58-204ENST00000394327 CEP85Q6P2H3 762 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 TRIM50Q86XT4 487 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 ANKRD44Q8N8A2 993 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 TTLL11Q8NHH1 800 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 JARID2Q92833 1246 aaPredicted RBP7.77□□□□□ -1.17
NUP58-204ENST00000394327 RPGRQ92834 1020 aaKnown RBP7.77□□□□□ -1.17
NUP58-204ENST00000394327 KAZALD1Q96I82 304 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 SERTAD1Q9UHV2 236 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 CHMP3Q9Y3E7 222 aa7.77□□□□□ -1.17
NUP58-204ENST00000394327 ARAP2Q8WZ64 1704 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 SLX4Q8IY92 1834 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 KLRG2A4D1S0 409 aaPredicted RBP7.76□□□□□ -1.17
NUP58-204ENST00000394327 SRGAP3O43295 1099 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 BMP2P12643 396 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 EPHA4P54764 986 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 ATP8B2P98198 1209 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 CLN3Q13286 438 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 IFIT5Q13325 482 aaKnown RBP7.76□□□□□ -1.17
NUP58-204ENST00000394327 CHD4Q14839 1912 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 CCDC57Q2TAC2 916 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 CRY2Q49AN0 593 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 EPHA10Q5JZY3 1008 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 LMBR1LQ6UX01 489 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 ANKMY2Q8IV38 441 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 ZNF295-AS1Q8N0V1 137 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 SYNE4Q8N205 404 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 CNKSR1Q969H4 720 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 CDC5LQ99459 802 aaKnown RBP7.76□□□□□ -1.17
NUP58-204ENST00000394327 ESYT1Q9BSJ8 1104 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 CD2APQ9Y5K6 639 aa7.76□□□□□ -1.17
NUP58-204ENST00000394327 AK9Q5TCS8 1911 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 CCDC88AQ3V6T2 1871 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 ANKRD18BA2A2Z9 1011 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 H0YIN7 160 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 MEN1O00255 615 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 SNRPBP14678 240 aaKnown RBP7.75□□□□□ -1.17
NUP58-204ENST00000394327 NPR1P16066 1061 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 HOXA10P31260 410 aaPredicted RBP7.75□□□□□ -1.17
NUP58-204ENST00000394327 TGFB2P61812 414 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 INSM1Q01101 510 aaPredicted RBP7.75□□□□□ -1.17
NUP58-204ENST00000394327 CENPCQ03188 943 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 HDAC1Q13547 482 aaPredicted RBP7.75□□□□□ -1.17
NUP58-204ENST00000394327 TMEM164Q5U3C3 297 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 DDX46Q7L014 1031 aaKnown RBP7.75□□□□□ -1.17
NUP58-204ENST00000394327 SSH3Q8TE77 659 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 RBM17Q96I25 401 aaKnown RBP7.75□□□□□ -1.17
NUP58-204ENST00000394327 RWDD1Q9H446 243 aaPredicted RBP7.75□□□□□ -1.17
NUP58-204ENST00000394327 GREM2Q9H772 168 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 PPP4R2Q9NY27 417 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 NOVA2Q9UNW9 492 aaKnown RBP7.75□□□□□ -1.17
NUP58-204ENST00000394327 FER1L6Q2WGJ9 1857 aa7.75□□□□□ -1.17
NUP58-204ENST00000394327 PNMA6EA0A0J9YXQ4 647 aa7.74□□□□□ -1.17
NUP58-204ENST00000394327 TMEM88BA6NKF7 163 aa7.74□□□□□ -1.17
NUP58-204ENST00000394327 ITGA6P23229 1130 aa7.74□□□□□ -1.17
NUP58-204ENST00000394327 ALDH1B1P30837 517 aa7.74□□□□□ -1.17
NUP58-204ENST00000394327 ATP1A2P50993 1020 aa7.74□□□□□ -1.17
NUP58-204ENST00000394327 ELOAQ14241 798 aaKnown RBP7.74□□□□□ -1.17
NUP58-204ENST00000394327 HSP90AB4PQ58FF6 505 aa7.74□□□□□ -1.17
NUP58-204ENST00000394327 TAF7LQ5H9L4 462 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms