RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 USP44Q9H0E7 712 aa13.61□□□□□ -0.23
VTI1BP2-201ENST00000394154 TTYH1Q9H313 450 aaPredicted RBP13.61□□□□□ -0.23
VTI1BP2-201ENST00000394154 IGHDP01880 384 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 CASP7P55210 303 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 SMAD3P84022 425 aaKnown RBP13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 TRIM32Q13049 653 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 GCKRQ14397 625 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 DNAH12Q6ZR08 3092 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 TBC1D22AQ8WUA7 517 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 FAM151AQ8WW52 585 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 MRIQ9BWK5 157 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 C1orf115Q9H7X2 142 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 C9orf78Q9NZ63 289 aaPredicted RBP13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 PTPRFP10586 1907 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 AK9Q5TCS8 1911 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 SYNGAP1Q96PV0 1343 aa13.6□□□□□ -0.23
VTI1BP2-201ENST00000394154 GYG1P46976 350 aa13.59□□□□□ -0.23
VTI1BP2-201ENST00000394154 GRIK5Q16478 980 aa13.59□□□□□ -0.23
VTI1BP2-201ENST00000394154 MAP3K21Q5TCX8 1036 aa13.59□□□□□ -0.23
VTI1BP2-201ENST00000394154 APOBEC3HQ6NTF7 200 aaKnown RBP13.59□□□□□ -0.23
VTI1BP2-201ENST00000394154 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
VTI1BP2-201ENST00000394154 ZHX2Q9Y6X8 837 aa13.59□□□□□ -0.23
VTI1BP2-201ENST00000394154 LTBP2Q14767 1821 aa13.59□□□□□ -0.23
VTI1BP2-201ENST00000394154 MAST3O60307 1309 aa13.59□□□□□ -0.23
VTI1BP2-201ENST00000394154 HMMRO75330 724 aa13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 PRKAR2AP13861 404 aaKnown RBP13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 UBE4AQ14139 1066 aa13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 SCYL3Q8IZE3 742 aa13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 ANKRD44Q8N8A2 993 aa13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 TRIB2Q92519 343 aa13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 FAM84BQ96KN1 310 aaPredicted RBP13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 PICK1Q9NRD5 415 aa13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 PRKAG2Q9UGJ0 569 aa13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 GJD2Q9UKL4 321 aa13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 PNMA3Q9UL41 463 aa13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 AFG3L2Q9Y4W6 797 aa13.58□□□□□ -0.24
VTI1BP2-201ENST00000394154 GRM8O00222 908 aa13.57□□□□□ -0.24
VTI1BP2-201ENST00000394154 SHHQ15465 462 aa13.57□□□□□ -0.24
VTI1BP2-201ENST00000394154 LDHAL6AQ6ZMR3 332 aa13.57□□□□□ -0.24
VTI1BP2-201ENST00000394154 CNNM1Q9NRU3 951 aa13.57□□□□□ -0.24
VTI1BP2-201ENST00000394154 AGTPBP1Q9UPW5 1226 aa13.57□□□□□ -0.24
VTI1BP2-201ENST00000394154 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
VTI1BP2-201ENST00000394154 PLXNB2O15031 1838 aa13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 ABCB7O75027 752 aa13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 PTPRAP18433 802 aa13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 GCLCP48506 637 aaPredicted RBP13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 TCP10Q12799 353 aa13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 CHAF1AQ13111 956 aaPredicted RBP13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 TAF7LQ5H9L4 462 aa13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 CEP85Q6P2H3 762 aa13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 HHIPL2Q6UWX4 724 aa13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 VPS37DQ86XT2 251 aa13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 USP38Q8NB14 1042 aa13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 ATXN2LQ8WWM7 1075 aaKnown RBP13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 SUGT1Q9Y2Z0 365 aa13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 LRRFIP2Q9Y608 721 aaKnown RBP13.56□□□□□ -0.24
VTI1BP2-201ENST00000394154 FRAT2O75474 233 aaPredicted RBP13.55□□□□□ -0.24
VTI1BP2-201ENST00000394154 NBPF7P0C2Y1 421 aaPredicted RBP13.55□□□□□ -0.24
VTI1BP2-201ENST00000394154 ATP8B2P98198 1209 aa13.55□□□□□ -0.24
VTI1BP2-201ENST00000394154 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
VTI1BP2-201ENST00000394154 ADAMTS19Q8TE59 1207 aa13.55□□□□□ -0.24
VTI1BP2-201ENST00000394154 UTYO14607 1347 aa13.55□□□□□ -0.24
VTI1BP2-201ENST00000394154 PHF20L1A8MW92 1017 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 FOXO4P98177 505 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 CCDC57Q2TAC2 916 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 LHX8Q68G74 356 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 SIRT2Q8IXJ6 389 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 C1QTNF1Q9BXJ1 281 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 IQSEC3Q9UPP2 1182 aaPredicted RBP13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 FRMPD3Q5JV73 1810 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 PHIPQ8WWQ0 1821 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 DOCK2Q92608 1830 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 DOCK1Q14185 1865 aa13.54□□□□□ -0.24
VTI1BP2-201ENST00000394154 TRIM75PA6NK02 468 aa13.53□□□□□ -0.24
VTI1BP2-201ENST00000394154 XRCC5P13010 732 aaKnown RBP13.53□□□□□ -0.24
VTI1BP2-201ENST00000394154 CYP2B6P20813 491 aa13.53□□□□□ -0.24
VTI1BP2-201ENST00000394154 FBXO33Q7Z6M2 555 aa13.53□□□□□ -0.24
VTI1BP2-201ENST00000394154 SMC5Q8IY18 1101 aa13.53□□□□□ -0.24
VTI1BP2-201ENST00000394154 SOCS4Q8WXH5 440 aa13.53□□□□□ -0.24
VTI1BP2-201ENST00000394154 ZNF594Q96JF6 807 aaPredicted RBP13.53□□□□□ -0.24
VTI1BP2-201ENST00000394154 ASB2Q96Q27 587 aa13.53□□□□□ -0.24
VTI1BP2-201ENST00000394154 UHRF1Q96T88 793 aaPredicted RBP13.53□□□□□ -0.24
VTI1BP2-201ENST00000394154 SENP6Q9GZR1 1112 aaPredicted RBP13.53□□□□□ -0.24
VTI1BP2-201ENST00000394154 ZKSCAN1P17029 563 aaPredicted RBP13.52□□□□□ -0.25
VTI1BP2-201ENST00000394154 CACNB2Q08289 660 aaPredicted RBP13.52□□□□□ -0.25
VTI1BP2-201ENST00000394154 CAVIN4Q5BKX8 364 aa13.52□□□□□ -0.25
VTI1BP2-201ENST00000394154 TREML2Q5T2D2 321 aa13.52□□□□□ -0.25
VTI1BP2-201ENST00000394154 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
VTI1BP2-201ENST00000394154 NUDT12Q9BQG2 462 aa13.52□□□□□ -0.25
VTI1BP2-201ENST00000394154 DCTPP1Q9H773 170 aa13.52□□□□□ -0.25
VTI1BP2-201ENST00000394154 THEGQ9P2T0 379 aa13.52□□□□□ -0.25
VTI1BP2-201ENST00000394154 LOC285556D6RIA3 1793 aa13.51□□□□□ -0.25
VTI1BP2-201ENST00000394154 ATRNL1Q5VV63 1379 aa13.51□□□□□ -0.25
VTI1BP2-201ENST00000394154 CCND3P30281 292 aaPredicted RBP13.51□□□□□ -0.25
VTI1BP2-201ENST00000394154 NFIAQ12857 509 aa13.51□□□□□ -0.25
VTI1BP2-201ENST00000394154 PABPC4Q13310 644 aaKnown RBP eCLIP13.51□□□□□ -0.25
VTI1BP2-201ENST00000394154 CDC42EP5Q6NZY7 148 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms