RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 SNAP23O00161 211 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 DEXIO95424 95 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 XBP1P17861 261 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 U2AF2P26368 475 aaKnown RBP eCLIP8.32□□□□□ -1.084e-6■■■■■ 27.7
SMAD1-202ENST00000394092 CDC27P30260 824 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 GYG1P46976 350 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 DHX8Q14562 1220 aaKnown RBP8.32□□□□□ -1.08
SMAD1-202ENST00000394092 NTRK3Q16288 839 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 RRP12Q5JTH9 1297 aaKnown RBP8.32□□□□□ -1.08
SMAD1-202ENST00000394092 DNTTIP2Q5QJE6 756 aaKnown RBP8.32□□□□□ -1.08
SMAD1-202ENST00000394092 TPTE2Q6XPS3 522 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 NBPF5PQ86XG9 351 aaPredicted RBP8.32□□□□□ -1.08
SMAD1-202ENST00000394092 PLA2G4DQ86XP0 818 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 DRC7Q8IY82 874 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 C8orf37Q96NL8 207 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 NOL10Q9BSC4 688 aaKnown RBP8.32□□□□□ -1.08
SMAD1-202ENST00000394092 SLC26A6Q9BXS9 759 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 MINPP1Q9UNW1 487 aa8.32□□□□□ -1.08
SMAD1-202ENST00000394092 SPATA31A6Q5VVP1 1343 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 NEMFO60524 1076 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 SLC3A2P08195 630 aaKnown RBP8.31□□□□□ -1.08
SMAD1-202ENST00000394092 CALM1P0DP23 149 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 CALM2P0DP24 149 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 CALM3P0DP25 149 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 RPS8P62241 208 aaKnown RBP8.31□□□□□ -1.08
SMAD1-202ENST00000394092 NOLC1Q14978 699 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMAD1-202ENST00000394092 IQCB1Q15051 598 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 LCE2DQ5TA82 110 aaPredicted RBP8.31□□□□□ -1.08
SMAD1-202ENST00000394092 TBC1D9BQ66K14 1250 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 IQCA1Q86XH1 822 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 MIGA1Q8NAN2 632 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 SPC24Q8NBT2 197 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 PHKBQ93100 1093 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 MRFAP1L1Q96HT8 127 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 BPIFA3Q9BQP9 254 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 RIOK1Q9BRS2 568 aaKnown RBP8.31□□□□□ -1.08
SMAD1-202ENST00000394092 FOXP1Q9H334 677 aaPredicted RBP8.31□□□□□ -1.08
SMAD1-202ENST00000394092 TTC12Q9H892 705 aaPredicted RBP8.31□□□□□ -1.08
SMAD1-202ENST00000394092 SPTLC3Q9NUV7 552 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 CEP131Q9UPN4 1083 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
SMAD1-202ENST00000394092 R3HCC1Q9Y3T6 440 aaKnown RBP8.31□□□□□ -1.08
SMAD1-202ENST00000394092 NAV1Q8NEY1 1877 aa8.31□□□□□ -1.08
SMAD1-202ENST00000394092 A0A1B0GVL5 298 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 GNPATO15228 680 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 AP5Z1O43299 807 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 PRKAB2O43741 272 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 RANBP6O60518 1105 aaKnown RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 CUTAO60888 179 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 MMP1P03956 469 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 POTEJP0CG39 1038 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 C7P10643 843 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 PFKFB1P16118 471 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 RXRAP19793 462 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 NDUFA8P51970 172 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 RBM6P78332 1123 aaKnown RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 AKAP17AQ02040 695 aaKnown RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 RILPL1Q5EBL4 403 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 SPTY2D1Q68D10 685 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 BICDL1Q6ZP65 573 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 C11orf57Q6ZUT1 292 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 FBXO33Q7Z6M2 555 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 NOSTRINQ8IVI9 506 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 CCDC144CPQ8IYA2 1237 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 ZNF654Q8IZM8 581 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 FNBP4Q8N3X1 1017 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 FAM84BQ96KN1 310 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 PRIMPOLQ96LW4 560 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 RNF26Q9BY78 433 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 CRNKL1Q9BZJ0 848 aaKnown RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 RBM28Q9NW13 759 aaKnown RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 KIAA1468Q9P260 1216 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 CLIP2Q9UDT6 1046 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 HOOK1Q9UJC3 728 aaKnown RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 CCNL1Q9UK58 526 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 TNKSO95271 1327 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 TNRC6CQ9HCJ0 1690 aaKnown RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 FAM237AA0A1B0GTK4 181 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 MINDY4BA8MYZ0 360 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 NPHP1O15259 732 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 DDAH1O94760 285 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 ZNF202O95125 648 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 HIBADHP31937 336 aaKnown RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 SYKP43405 635 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 CHAF1AQ13111 956 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 AXDND1Q5T1B0 1012 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 C3orf67Q6ZVT6 689 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 CATIPQ7Z7H3 387 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 FANCBQ8NB91 859 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 KIAA1524Q8TCG1 905 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 SDR42E1Q8WUS8 393 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 SLC39A7Q92504 469 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 CELF1Q92879 486 aaKnown RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 AIFM3Q96NN9 605 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 MYL10Q9BUA6 226 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 BCL2L12Q9HB09 334 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 SENP2Q9HC62 589 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 ANO8Q9HCE9 1232 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms