RNA–Protein interactions for RNA: ENST00000393648.6

FGFR4-203, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FGFR4, Length 2,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-203ENST00000393648 FUCA2Q9BTY2 467 aa20.2■□□□□ 0.82
FGFR4-203ENST00000393648 METAP2P50579 478 aaKnown RBP eCLIP20.2■□□□□ 0.829e-6■■■■□ 23.9
FGFR4-203ENST00000393648 PHKBQ93100 1093 aa20.2■□□□□ 0.82
FGFR4-203ENST00000393648 SPATA32Q96LK8 384 aa20.2■□□□□ 0.82
FGFR4-203ENST00000393648 LEMD3Q9Y2U8 911 aa20.2■□□□□ 0.82
FGFR4-203ENST00000393648 WDR19Q8NEZ3 1342 aa20.2■□□□□ 0.82
FGFR4-203ENST00000393648 UBE2Q2LH0YL09 131 aa20.19■□□□□ 0.82
FGFR4-203ENST00000393648 STAG1Q8WVM7 1258 aa20.19■□□□□ 0.82
FGFR4-203ENST00000393648 RBM17Q96I25 401 aaKnown RBP20.19■□□□□ 0.82
FGFR4-203ENST00000393648 USP17L12C9JPN9 530 aa20.19■□□□□ 0.82
FGFR4-203ENST00000393648 USP17L21D6R901 530 aa20.19■□□□□ 0.82
FGFR4-203ENST00000393648 DIXDC1Q155Q3 683 aa20.19■□□□□ 0.82
FGFR4-203ENST00000393648 TMEM87BQ96K49 555 aa20.19■□□□□ 0.82
FGFR4-203ENST00000393648 DHX16O60231 1041 aaKnown RBP20.18■□□□□ 0.82
FGFR4-203ENST00000393648 RXRBP28702 533 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 DZIP1Q86YF9 867 aaKnown RBP20.18■□□□□ 0.82
FGFR4-203ENST00000393648 LEO1Q8WVC0 666 aaPredicted RBP20.18■□□□□ 0.82
FGFR4-203ENST00000393648 KRT23Q9C075 422 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 CAPN2P17655 700 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 TPD52L1Q16890 204 aaPredicted RBP20.18■□□□□ 0.82
FGFR4-203ENST00000393648 KMT5BQ4FZB7 885 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 LUZP1Q86V48 1076 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 CNNM2Q9H8M5 875 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 PLSCR1O15162 318 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 ZBTB43O43298 467 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 CERS3Q8IU89 383 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 CCDC82Q8N4S0 544 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 POLLQ9UGP5 575 aa20.18■□□□□ 0.82
FGFR4-203ENST00000393648 CTR9Q6PD62 1173 aa20.17■□□□□ 0.82
FGFR4-203ENST00000393648 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
FGFR4-203ENST00000393648 SYCP1Q15431 976 aa20.17■□□□□ 0.82
FGFR4-203ENST00000393648 CMTR1Q8N1G2 835 aaKnown RBP20.17■□□□□ 0.82
FGFR4-203ENST00000393648 TRIM34Q9BYJ4 488 aa20.17■□□□□ 0.82
FGFR4-203ENST00000393648 SLC12A7Q9Y666 1083 aa20.17■□□□□ 0.82
FGFR4-203ENST00000393648 CCDC69A6NI79 296 aa20.16■□□□□ 0.82
FGFR4-203ENST00000393648 C6orf229H3BNL8 230 aa20.16■□□□□ 0.82
FGFR4-203ENST00000393648 POLR3DP05423 398 aaPredicted RBP20.16■□□□□ 0.82
FGFR4-203ENST00000393648 CYP2D6P10635 497 aa20.16■□□□□ 0.82
FGFR4-203ENST00000393648 ILDR1Q86SU0 546 aaPredicted RBP20.16■□□□□ 0.82
FGFR4-203ENST00000393648 C8orf76Q96K31 380 aa20.16■□□□□ 0.82
FGFR4-203ENST00000393648 ZSCAN16Q9H4T2 348 aaPredicted RBP20.16■□□□□ 0.82
FGFR4-203ENST00000393648 FAM217BQ9NTX9 383 aaPredicted RBP20.16■□□□□ 0.82
FGFR4-203ENST00000393648 GGA1Q9UJY5 639 aa20.16■□□□□ 0.82
FGFR4-203ENST00000393648 LDHBP07195 334 aaKnown RBP20.16■□□□□ 0.82
FGFR4-203ENST00000393648 LIG1P18858 919 aa20.16■□□□□ 0.82
FGFR4-203ENST00000393648 CAMK4Q16566 473 aa20.16■□□□□ 0.82
FGFR4-203ENST00000393648 PAXIP1Q6ZW49 1069 aaPredicted RBP20.16■□□□□ 0.82
FGFR4-203ENST00000393648 ZNF804AQ7Z570 1209 aa20.16■□□□□ 0.82
FGFR4-203ENST00000393648 SCAND2PQ9GZW5 306 aaPredicted RBP20.16■□□□□ 0.82
FGFR4-203ENST00000393648 DCP1AQ9NPI6 582 aaPredicted RBP20.16■□□□□ 0.82
FGFR4-203ENST00000393648 MYH13Q9UKX3 1938 aa20.15■□□□□ 0.82
FGFR4-203ENST00000393648 GOLGA8AA7E2F4 631 aa20.15■□□□□ 0.82
FGFR4-203ENST00000393648 RANBP6O60518 1105 aaKnown RBP20.15■□□□□ 0.82
FGFR4-203ENST00000393648 SGMS1Q86VZ5 419 aa20.15■□□□□ 0.82
FGFR4-203ENST00000393648 BAZ2AQ9UIF9 1905 aaKnown RBP20.15■□□□□ 0.82
FGFR4-203ENST00000393648 BBOX1O75936 387 aa20.15■□□□□ 0.82
FGFR4-203ENST00000393648 MMP10P09238 476 aa20.15■□□□□ 0.82
FGFR4-203ENST00000393648 PGBD1Q96JS3 809 aa20.15■□□□□ 0.82
FGFR4-203ENST00000393648 CD209Q9NNX6 404 aa20.15■□□□□ 0.82
FGFR4-203ENST00000393648 RIMBP2O15034 1052 aa20.14■□□□□ 0.82
FGFR4-203ENST00000393648 CCDC192P0DO97 292 aa20.14■□□□□ 0.82
FGFR4-203ENST00000393648 LIFRP42702 1097 aa20.14■□□□□ 0.82
FGFR4-203ENST00000393648 WTAPQ15007 396 aa20.14■□□□□ 0.82
FGFR4-203ENST00000393648 NLGN1Q8N2Q7 840 aa20.14■□□□□ 0.82
FGFR4-203ENST00000393648 TBC1D16Q8TBP0 767 aa20.14■□□□□ 0.82
FGFR4-203ENST00000393648 USP28Q96RU2 1077 aa20.14■□□□□ 0.82
FGFR4-203ENST00000393648 RNF41Q9H4P4 317 aaPredicted RBP20.14■□□□□ 0.82
FGFR4-203ENST00000393648 PDS5AQ29RF7 1337 aaKnown RBP20.14■□□□□ 0.81
FGFR4-203ENST00000393648 GOLGA6L4A6NEF3 574 aa20.14■□□□□ 0.81
FGFR4-203ENST00000393648 HOXA10P31260 410 aaPredicted RBP20.14■□□□□ 0.81
FGFR4-203ENST00000393648 NUP133Q8WUM0 1156 aa20.14■□□□□ 0.81
FGFR4-203ENST00000393648 BRIP1Q9BX63 1249 aa20.14■□□□□ 0.81
FGFR4-203ENST00000393648 CALCOCO1Q9P1Z2 691 aa20.14■□□□□ 0.81
FGFR4-203ENST00000393648 FBXO18Q8NFZ0 1043 aa20.13■□□□□ 0.81
FGFR4-203ENST00000393648 WDR66Q8TBY9 1149 aa20.13■□□□□ 0.81
FGFR4-203ENST00000393648 UBAC1Q9BSL1 405 aa20.13■□□□□ 0.81
FGFR4-203ENST00000393648 CRNKL1Q9BZJ0 848 aaKnown RBP20.13■□□□□ 0.81
FGFR4-203ENST00000393648 ZNF215Q9UL58 517 aaPredicted RBP20.13■□□□□ 0.81
FGFR4-203ENST00000393648 NTRK3Q16288 839 aa20.13■□□□□ 0.81
FGFR4-203ENST00000393648 ZNF397Q8NF99 534 aaPredicted RBP20.13■□□□□ 0.81
FGFR4-203ENST00000393648 PAXBP1Q9Y5B6 917 aa20.13■□□□□ 0.81
FGFR4-203ENST00000393648 USP17L8P0C7I0 530 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 CEP135Q66GS9 1140 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 CHMP4CQ96CF2 233 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 TRIM5Q9C035 493 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 ANAPC4Q9UJX5 808 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 ELP1O95163 1332 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 ERICH2A1L162 156 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 ATP2B4P23634 1241 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 SART3Q15020 963 aaKnown RBP20.12■□□□□ 0.81
FGFR4-203ENST00000393648 ELF2Q15723 593 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 FBXO38Q6PIJ6 1188 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 ESR2Q92731 530 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 TNKSO95271 1327 aa20.12■□□□□ 0.81
FGFR4-203ENST00000393648 KLRG2A4D1S0 409 aaPredicted RBP20.11■□□□□ 0.81
FGFR4-203ENST00000393648 NMT2O60551 498 aa20.11■□□□□ 0.81
FGFR4-203ENST00000393648 FAM47AQ5JRC9 791 aa20.11■□□□□ 0.81
FGFR4-203ENST00000393648 SPTY2D1Q68D10 685 aaPredicted RBP20.11■□□□□ 0.81
FGFR4-203ENST00000393648 SH3RF3Q8TEJ3 882 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms