RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 EYA3Q99504 573 aa25.89■■□□□ 1.74
HMGA2-203ENST00000393578 NT5C2P49902 561 aa25.89■■□□□ 1.73
HMGA2-203ENST00000393578 PDE4BQ07343 736 aa25.89■■□□□ 1.73
HMGA2-203ENST00000393578 TTC6Q86TZ1 520 aa25.89■■□□□ 1.73
HMGA2-203ENST00000393578 CCDC144CPQ8IYA2 1237 aa25.89■■□□□ 1.73
HMGA2-203ENST00000393578 CFAP45Q9UL16 551 aa25.89■■□□□ 1.73
HMGA2-203ENST00000393578 PRDM1O75626 825 aa25.88■■□□□ 1.73
HMGA2-203ENST00000393578 PLCG2P16885 1265 aa25.88■■□□□ 1.73
HMGA2-203ENST00000393578 BTDP43251 543 aa25.88■■□□□ 1.73
HMGA2-203ENST00000393578 C12orf60Q5U649 245 aa25.88■■□□□ 1.73
HMGA2-203ENST00000393578 TFIP11Q9UBB9 837 aaKnown RBP25.88■■□□□ 1.73
HMGA2-203ENST00000393578 USP17L8P0C7I0 530 aa25.87■■□□□ 1.73
HMGA2-203ENST00000393578 CYP2D6P10635 497 aa25.87■■□□□ 1.73
HMGA2-203ENST00000393578 GUCY1B3Q02153 619 aa25.87■■□□□ 1.73
HMGA2-203ENST00000393578 ATL3Q6DD88 541 aa25.87■■□□□ 1.73
HMGA2-203ENST00000393578 ENAHQ8N8S7 591 aaPredicted RBP25.87■■□□□ 1.73
HMGA2-203ENST00000393578 SPATA32Q96LK8 384 aa25.87■■□□□ 1.73
HMGA2-203ENST00000393578 GAKO14976 1311 aa25.87■■□□□ 1.73
HMGA2-203ENST00000393578 CCDC196A0A1B0GTZ2 297 aa25.87■■□□□ 1.73
HMGA2-203ENST00000393578 IARSP41252 1262 aaKnown RBP25.87■■□□□ 1.73
HMGA2-203ENST00000393578 AMOTL1Q8IY63 956 aa25.87■■□□□ 1.73
HMGA2-203ENST00000393578 ZNF654Q8IZM8 581 aa25.87■■□□□ 1.73
HMGA2-203ENST00000393578 CNKSR1Q969H4 720 aa25.87■■□□□ 1.73
HMGA2-203ENST00000393578 EVX2Q03828 476 aa25.86■■□□□ 1.73
HMGA2-203ENST00000393578 PPP2R5BQ15173 497 aa25.86■■□□□ 1.73
HMGA2-203ENST00000393578 RTN1Q16799 776 aa25.86■■□□□ 1.73
HMGA2-203ENST00000393578 LEO1Q8WVC0 666 aaPredicted RBP25.86■■□□□ 1.73
HMGA2-203ENST00000393578 GRPEL1Q9HAV7 217 aa25.86■■□□□ 1.73
HMGA2-203ENST00000393578 STK36Q9NRP7 1315 aa25.86■■□□□ 1.73
HMGA2-203ENST00000393578 IFNAR1P17181 557 aa25.86■■□□□ 1.73
HMGA2-203ENST00000393578 TGFBRAP1Q8WUH2 860 aa25.86■■□□□ 1.73
HMGA2-203ENST00000393578 FANCBQ8NB91 859 aa25.85■■□□□ 1.73
HMGA2-203ENST00000393578 PHKBQ93100 1093 aa25.85■■□□□ 1.73
HMGA2-203ENST00000393578 ROBO3Q96MS0 1386 aa25.85■■□□□ 1.73
HMGA2-203ENST00000393578 XRCC6P12956 609 aaKnown RBP eCLIP25.84■■□□□ 1.73
HMGA2-203ENST00000393578 IFIT1BQ5T764 474 aaKnown RBP25.84■■□□□ 1.73
HMGA2-203ENST00000393578 MYH15Q9Y2K3 1946 aa25.84■■□□□ 1.73
HMGA2-203ENST00000393578 G3V3G9 751 aa25.84■■□□□ 1.73
HMGA2-203ENST00000393578 SSRP1Q08945 709 aaKnown RBP25.84■■□□□ 1.73
HMGA2-203ENST00000393578 DOK7Q18PE1 504 aa25.84■■□□□ 1.73
HMGA2-203ENST00000393578 DCAF8Q5TAQ9 597 aa25.84■■□□□ 1.73
HMGA2-203ENST00000393578 DEFB132Q7Z7B7 95 aa25.84■■□□□ 1.73
HMGA2-203ENST00000393578 ALG1Q9BT22 464 aa25.84■■□□□ 1.73
HMGA2-203ENST00000393578 NAV1Q8NEY1 1877 aa25.83■■□□□ 1.73
HMGA2-203ENST00000393578 FMNL1O95466 1100 aaPredicted RBP25.83■■□□□ 1.73
HMGA2-203ENST00000393578 CHRNA5P30532 468 aa25.83■■□□□ 1.73
HMGA2-203ENST00000393578 TEX11Q8IYF3 940 aa25.83■■□□□ 1.73
HMGA2-203ENST00000393578 ZNF396Q96N95 335 aaPredicted RBP25.83■■□□□ 1.73
HMGA2-203ENST00000393578 SLX4Q8IY92 1834 aa25.83■■□□□ 1.72
HMGA2-203ENST00000393578 DLEC1Q9Y238 1755 aa25.82■■□□□ 1.72
HMGA2-203ENST00000393578 OTUD7BQ6GQQ9 843 aa25.82■■□□□ 1.72
HMGA2-203ENST00000393578 PODNQ7Z5L7 613 aa25.82■■□□□ 1.72
HMGA2-203ENST00000393578 CATIPQ7Z7H3 387 aa25.82■■□□□ 1.72
HMGA2-203ENST00000393578 ILDR1Q86SU0 546 aaPredicted RBP25.82■■□□□ 1.72
HMGA2-203ENST00000393578 SYCE3A1L190 88 aa25.82■■□□□ 1.72
HMGA2-203ENST00000393578 RHBDL3P58872 404 aa25.82■■□□□ 1.72
HMGA2-203ENST00000393578 CCDC183Q5T5S1 534 aa25.82■■□□□ 1.72
HMGA2-203ENST00000393578 BRAPQ7Z569 592 aa25.82■■□□□ 1.72
HMGA2-203ENST00000393578 WASF1Q92558 559 aa25.82■■□□□ 1.72
HMGA2-203ENST00000393578 FBXW7Q969H0 707 aa25.82■■□□□ 1.72
HMGA2-203ENST00000393578 LRSAM1Q6UWE0 723 aa25.81■■□□□ 1.72
HMGA2-203ENST00000393578 MAPKAPK5Q8IW41 473 aa25.81■■□□□ 1.72
HMGA2-203ENST00000393578 CERS5Q8N5B7 392 aa25.81■■□□□ 1.72
HMGA2-203ENST00000393578 NUP133Q8WUM0 1156 aa25.81■■□□□ 1.72
HMGA2-203ENST00000393578 SLC26A6Q9BXS9 759 aa25.81■■□□□ 1.72
HMGA2-203ENST00000393578 CDK5RAP2Q96SN8 1893 aa25.81■■□□□ 1.72
HMGA2-203ENST00000393578 CALM1P0DP23 149 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 CALM2P0DP24 149 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 CALM3P0DP25 149 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 TRIM22Q8IYM9 498 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 DAGLAQ9Y4D2 1042 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 GOLGA6L4A6NEF3 574 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 TSPY2A6NKD2 308 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 FAM47AQ5JRC9 791 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 C7orf43Q8WVR3 580 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 AIFM3Q96NN9 605 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 GJB4Q9NTQ9 266 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 RCOR1Q9UKL0 485 aa25.8■■□□□ 1.72
HMGA2-203ENST00000393578 POLR3DP05423 398 aaPredicted RBP25.79■■□□□ 1.72
HMGA2-203ENST00000393578 CC2D2BQ6DHV5 1058 aa25.79■■□□□ 1.72
HMGA2-203ENST00000393578 CRACR2BQ8N4Y2 399 aaPredicted RBP25.79■■□□□ 1.72
HMGA2-203ENST00000393578 PDGFDQ9GZP0 370 aaPredicted RBP25.79■■□□□ 1.72
HMGA2-203ENST00000393578 FLT1P17948 1338 aa25.79■■□□□ 1.72
HMGA2-203ENST00000393578 DDAH1O94760 285 aa25.78■■□□□ 1.72
HMGA2-203ENST00000393578 LETM1O95202 739 aaPredicted RBP25.78■■□□□ 1.72
HMGA2-203ENST00000393578 SLC4A8Q2Y0W8 1093 aa25.78■■□□□ 1.72
HMGA2-203ENST00000393578 TPRNQ4KMQ1 711 aa25.78■■□□□ 1.72
HMGA2-203ENST00000393578 NBPF11Q86T75 865 aa25.78■■□□□ 1.72
HMGA2-203ENST00000393578 KIF23Q02241 960 aaPredicted RBP25.78■■□□□ 1.72
HMGA2-203ENST00000393578 TROAPQ12815 778 aa25.78■■□□□ 1.72
HMGA2-203ENST00000393578 TRIM29Q14134 588 aa25.78■■□□□ 1.72
HMGA2-203ENST00000393578 KRT40Q6A162 431 aa25.78■■□□□ 1.72
HMGA2-203ENST00000393578 MKNK2Q9HBH9 465 aa25.78■■□□□ 1.72
HMGA2-203ENST00000393578 ZNF287Q9HBT7 754 aa25.78■■□□□ 1.72
HMGA2-203ENST00000393578 TTF2Q9UNY4 1162 aaKnown RBP25.78■■□□□ 1.72
HMGA2-203ENST00000393578 DDX60LQ5H9U9 1706 aaKnown RBP25.78■■□□□ 1.72
HMGA2-203ENST00000393578 PLCD1P51178 756 aa25.77■■□□□ 1.72
HMGA2-203ENST00000393578 KLHL34Q8N239 644 aa25.77■■□□□ 1.72
HMGA2-203ENST00000393578 SLC16A10Q8TF71 515 aa25.77■■□□□ 1.72
HMGA2-203ENST00000393578 DYNLL2Q96FJ2 89 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms