RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 SLC9C1Q4G0N8 1177 aa22.37■■□□□ 1.17
PDLIM7-205ENST00000393551 EXOC6BQ9Y2D4 811 aa22.37■■□□□ 1.17
PDLIM7-205ENST00000393551 TRIM75PA6NK02 468 aa22.36■■□□□ 1.17
PDLIM7-205ENST00000393551 GNRH1P01148 92 aa22.36■■□□□ 1.17
PDLIM7-205ENST00000393551 PSMC4P43686 418 aa22.36■■□□□ 1.17
PDLIM7-205ENST00000393551 FASTKD5Q7L8L6 764 aaKnown RBP22.36■■□□□ 1.17
PDLIM7-205ENST00000393551 SH3TC2Q8TF17 1288 aa22.36■■□□□ 1.17
PDLIM7-205ENST00000393551 PARK7Q99497 189 aaKnown RBP22.36■■□□□ 1.17
PDLIM7-205ENST00000393551 NDUFB9Q9Y6M9 179 aa22.36■■□□□ 1.17
PDLIM7-205ENST00000393551 GADL1Q6ZQY3 521 aa22.35■■□□□ 1.17
PDLIM7-205ENST00000393551 OSBPP22059 807 aa22.34■■□□□ 1.17
PDLIM7-205ENST00000393551 PRPF38BQ5VTL8 546 aaKnown RBP22.34■■□□□ 1.17
PDLIM7-205ENST00000393551 TGFBRAP1Q8WUH2 860 aa22.34■■□□□ 1.17
PDLIM7-205ENST00000393551 ANTXR1Q9H6X2 564 aa22.34■■□□□ 1.17
PDLIM7-205ENST00000393551 DNAJC18Q9H819 358 aa22.34■■□□□ 1.17
PDLIM7-205ENST00000393551 SRRDQ9UH36 339 aa22.34■■□□□ 1.17
PDLIM7-205ENST00000393551 LOC285556D6RIA3 1793 aa22.33■■□□□ 1.17
PDLIM7-205ENST00000393551 BAG3O95817 575 aa22.33■■□□□ 1.17
PDLIM7-205ENST00000393551 CAP2P40123 477 aa22.33■■□□□ 1.17
PDLIM7-205ENST00000393551 DYNLL1P63167 89 aaKnown RBP22.33■■□□□ 1.17
PDLIM7-205ENST00000393551 JAG1P78504 1218 aa22.33■■□□□ 1.17
PDLIM7-205ENST00000393551 TREML2Q5T2D2 321 aa22.33■■□□□ 1.17
PDLIM7-205ENST00000393551 NBPF11Q86T75 865 aa22.33■■□□□ 1.17
PDLIM7-205ENST00000393551 MAPKAPK5Q8IW41 473 aa22.33■■□□□ 1.17
PDLIM7-205ENST00000393551 SIRT2Q8IXJ6 389 aa22.33■■□□□ 1.17
PDLIM7-205ENST00000393551 SLC45A1Q9Y2W3 748 aa22.33■■□□□ 1.17
PDLIM7-205ENST00000393551 DOCK3Q8IZD9 2030 aa22.33■■□□□ 1.16
PDLIM7-205ENST00000393551 FLT1P17948 1338 aa22.32■■□□□ 1.16
PDLIM7-205ENST00000393551 MYCP01106 439 aaPredicted RBP22.32■■□□□ 1.16
PDLIM7-205ENST00000393551 METTL16Q86W50 562 aaKnown RBP22.32■■□□□ 1.16
PDLIM7-205ENST00000393551 NOL10Q9BSC4 688 aaKnown RBP22.32■■□□□ 1.16
PDLIM7-205ENST00000393551 PI4KBQ9UBF8 816 aa22.32■■□□□ 1.16
PDLIM7-205ENST00000393551 SLC34A2O95436 690 aa22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 FMNL1O95466 1100 aaPredicted RBP22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 PLCG2P16885 1265 aa22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 PRMT2P55345 433 aa22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 SPP2Q13103 211 aa22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 SHROOM1Q2M3G4 852 aaPredicted RBP22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 AACSQ86V21 672 aa22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 DHX36Q9H2U1 1008 aaKnown RBP22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 IL1RAPL2Q9NP60 686 aa22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 ZBTB40Q9NUA8 1239 aa22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 HERC5Q9UII4 1024 aaKnown RBP22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 PALD1Q9ULE6 856 aa22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 AGTPBP1Q9UPW5 1226 aa22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 COG6Q9Y2V7 657 aa22.31■■□□□ 1.16
PDLIM7-205ENST00000393551 MYH1P12882 1939 aa22.3■■□□□ 1.16
PDLIM7-205ENST00000393551 IGSF3O75054 1194 aa22.3■■□□□ 1.16
PDLIM7-205ENST00000393551 CYP7A1P22680 504 aa22.3■■□□□ 1.16
PDLIM7-205ENST00000393551 ZNF280CQ8ND82 737 aa22.3■■□□□ 1.16
PDLIM7-205ENST00000393551 RHPN1Q8TCX5 695 aa22.3■■□□□ 1.16
PDLIM7-205ENST00000393551 TMEM106CQ9BVX2 250 aa22.3■■□□□ 1.16
PDLIM7-205ENST00000393551 IDH1O75874 414 aaKnown RBP22.29■■□□□ 1.16
PDLIM7-205ENST00000393551 PRKCZQ05513 592 aa22.29■■□□□ 1.16
PDLIM7-205ENST00000393551 MTFR1Q15390 333 aa22.29■■□□□ 1.16
PDLIM7-205ENST00000393551 ERC1Q8IUD2 1116 aa22.29■■□□□ 1.16
PDLIM7-205ENST00000393551 GABRQQ9UN88 632 aa22.29■■□□□ 1.16
PDLIM7-205ENST00000393551 MYPNQ86TC9 1320 aa22.29■■□□□ 1.16
PDLIM7-205ENST00000393551 MAGEB6Q8N7X4 407 aa22.28■■□□□ 1.16
PDLIM7-205ENST00000393551 MIGA1Q8NAN2 632 aa22.28■■□□□ 1.16
PDLIM7-205ENST00000393551 PROCA1Q8NCQ7 364 aaPredicted RBP22.28■■□□□ 1.16
PDLIM7-205ENST00000393551 SAP30BPQ9UHR5 308 aaKnown RBP22.28■■□□□ 1.16
PDLIM7-205ENST00000393551 USP17L5A8MUK1 530 aa22.27■■□□□ 1.16
PDLIM7-205ENST00000393551 MS4A1P11836 297 aa22.27■■□□□ 1.16
PDLIM7-205ENST00000393551 HOXD10P28358 340 aa22.27■■□□□ 1.16
PDLIM7-205ENST00000393551 HMGCS2P54868 508 aa22.27■■□□□ 1.16
PDLIM7-205ENST00000393551 FCGRTP55899 365 aa22.27■■□□□ 1.16
PDLIM7-205ENST00000393551 SLC4A8Q2Y0W8 1093 aa22.27■■□□□ 1.16
PDLIM7-205ENST00000393551 FOXP4Q8IVH2 680 aaPredicted RBP22.27■■□□□ 1.16
PDLIM7-205ENST00000393551 SH3D19Q5HYK7 790 aa22.26■■□□□ 1.15
PDLIM7-205ENST00000393551 RPAP2Q8IXW5 612 aaPredicted RBP22.26■■□□□ 1.15
PDLIM7-205ENST00000393551 SMCR8Q8TEV9 937 aaPredicted RBP22.26■■□□□ 1.15
PDLIM7-205ENST00000393551 DDX19BQ9UMR2 479 aa22.26■■□□□ 1.15
PDLIM7-205ENST00000393551 GRK4P32298 578 aa22.25■■□□□ 1.15
PDLIM7-205ENST00000393551 ANKRD13CQ8N6S4 541 aa22.25■■□□□ 1.15
PDLIM7-205ENST00000393551 RAET1EQ8TD07 263 aa22.25■■□□□ 1.15
PDLIM7-205ENST00000393551 WDR18Q9BV38 432 aa22.25■■□□□ 1.15
PDLIM7-205ENST00000393551 TBC1D2Q9BYX2 928 aa22.25■■□□□ 1.15
PDLIM7-205ENST00000393551 RCAN3Q9UKA8 241 aa22.25■■□□□ 1.15
PDLIM7-205ENST00000393551 APBB1O00213 710 aa22.24■■□□□ 1.15
PDLIM7-205ENST00000393551 GDF11O95390 407 aa22.24■■□□□ 1.15
PDLIM7-205ENST00000393551 HSP90AB4PQ58FF6 505 aa22.24■■□□□ 1.15
PDLIM7-205ENST00000393551 C20orf194Q5TEA3 1177 aa22.24■■□□□ 1.15
PDLIM7-205ENST00000393551 SHISA4Q96DD7 197 aa22.24■■□□□ 1.15
PDLIM7-205ENST00000393551 CEP290O15078 2479 aa22.24■■□□□ 1.15
PDLIM7-205ENST00000393551 DDX60LQ5H9U9 1706 aaKnown RBP22.23■■□□□ 1.15
PDLIM7-205ENST00000393551 ASNSP08243 561 aa22.23■■□□□ 1.15
PDLIM7-205ENST00000393551 MTMR2Q13614 643 aa22.23■■□□□ 1.15
PDLIM7-205ENST00000393551 CRACR2BQ8N4Y2 399 aaPredicted RBP22.23■■□□□ 1.15
PDLIM7-205ENST00000393551 KIF1BPQ96EK5 621 aa22.23■■□□□ 1.15
PDLIM7-205ENST00000393551 RIOK1Q9BRS2 568 aaKnown RBP22.23■■□□□ 1.15
PDLIM7-205ENST00000393551 FLT3LGP49771 235 aa22.22■■□□□ 1.15
PDLIM7-205ENST00000393551 BACE1P56817 501 aa22.22■■□□□ 1.15
PDLIM7-205ENST00000393551 MAP3K12Q12852 859 aa22.22■■□□□ 1.15
PDLIM7-205ENST00000393551 ASCC2Q9H1I8 757 aaPredicted RBP22.22■■□□□ 1.15
PDLIM7-205ENST00000393551 AS3MTQ9HBK9 375 aa22.22■■□□□ 1.15
PDLIM7-205ENST00000393551 ZBTB21Q9ULJ3 1066 aa22.22■■□□□ 1.15
PDLIM7-205ENST00000393551 FAM110CQ1W6H9 321 aa22.21■■□□□ 1.15
PDLIM7-205ENST00000393551 PNMA3Q9UL41 463 aa22.21■■□□□ 1.15
PDLIM7-205ENST00000393551 TNPO2O14787 897 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms