RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 GIPC1O14908 333 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 KRT86O43790 486 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 SEC24DO94855 1032 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 KLHL18O94889 574 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 KRT8P05787 483 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 CTNNA1P35221 906 aaKnown RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 ESRRGP62508 458 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 HIF1AQ16665 826 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ANO4Q32M45 955 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 KRT71Q3SY84 523 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 MMEL1Q495T6 779 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 TMTC4Q5T4D3 741 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 NUTM2GQ5VZR2 741 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 TMED8Q6PL24 325 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 ADAT2Q7Z6V5 191 aaKnown RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 EFCAB13Q8IY85 973 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 RNF217Q8TC41 542 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 LEO1Q8WVC0 666 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 L3MBTL2Q969R5 705 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 DACH2Q96NX9 599 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ASCC2Q9H1I8 757 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 RNF39Q9H2S5 420 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 CD2APQ9Y5K6 639 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 CFLARO15519 480 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ZMYND10O75800 440 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 OCA2Q04671 838 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 SSRP1Q08945 709 aaKnown RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 GOLGA8FQ08AF8 430 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 GOLGA8DPQ0D2H9 430 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 TBL3Q12788 808 aaKnown RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 KLHL40Q2TBA0 621 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 ZSCAN29Q8IWY8 852 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 CHMP6Q96FZ7 201 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 NEK1Q96PY6 1258 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 SCAND2PQ9GZW5 306 aaPredicted RBP3.63□□□□□ -1.83
PHF3-202ENST00000393387 CXorf56Q9H5V9 222 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 DIABLOQ9NR28 239 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 SPG7Q9UQ90 795 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 USTQ9Y2C2 406 aa3.63□□□□□ -1.83
PHF3-202ENST00000393387 IPO5O00410 1097 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 LSM1O15116 133 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 FMNL1O95466 1100 aaPredicted RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 NBPF9Q3BBW0 867 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 LLGL2Q6P1M3 1020 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 CASC4Q6P4E1 433 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 RGS9BPQ6ZS82 235 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 CTAGE3PQ8IX95 158 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 ARMC2Q8NEN0 867 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 ATP6V0A1Q93050 837 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 DHX58Q96C10 678 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 SDCCAG3Q96C92 435 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 PHACTR3Q96KR7 559 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 LRRC2Q9BYS8 371 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 DPH5Q9H2P9 285 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 GNL3LQ9NVN8 582 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 DACT1Q9NYF0 836 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 ASIC3Q9UHC3 531 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 FAM13AO94988 1023 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 ECE1P42892 770 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 ST13P50502 369 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 HDLBPQ00341 1268 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 BTKQ06187 659 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 TYRO3Q06418 890 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 GRAMD1BQ3KR37 738 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 BEND3Q5T5X7 828 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 CAPRIN2Q6IMN6 1127 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 BTNL9Q6UXG8 535 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 JARID2Q92833 1246 aaPredicted RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 PPP1R14BQ96C90 147 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 GCC1Q96CN9 775 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 KLHL29Q96CT2 875 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 PAWRQ96IZ0 340 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 CCDC42Q96M95 316 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 CCDC90BQ9GZT6 254 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 ATP11BQ9Y2G3 1177 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 KIF1CO43896 1103 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 TRIM37O94972 964 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 TROVE2P10155 538 aaKnown RBP eCLIP3.62□□□□□ -1.83
PHF3-202ENST00000393387 DNM1Q05193 864 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 FAPQ12884 760 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 PPP4R3AQ6IN85 833 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 WASF1Q92558 559 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 RUNDC1Q96C34 613 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 PKD2L1Q9P0L9 805 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 NFKBIL1Q9UBC1 381 aaPredicted RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 SEC63Q9UGP8 760 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 ADAMTS8Q9UP79 889 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 ANKRD30AQ9BXX3 1397 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 RAB3GAP2Q9H2M9 1393 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 LINC00854A0A1B0GVQ3 168 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 SYNDIG1LA6NDD5 238 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 TADA3O75528 432 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 IDH1O75874 414 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 UBE2HP62256 183 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 HDAC1Q13547 482 aaPredicted RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 CEP55Q53EZ4 464 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 RBM26Q5T8P6 1007 aaKnown RBP3.62□□□□□ -1.83
PHF3-202ENST00000393387 C20orf194Q5TEA3 1177 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 GGT6Q6P531 493 aa3.62□□□□□ -1.83
PHF3-202ENST00000393387 LVRNQ6Q4G3 990 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms