RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 DNAJC18Q9H819 358 aa9.29□□□□□ -0.92
HMGB3P1-201ENST00000393368 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMGB3P1-201ENST00000393368 COL2A1P02458 1487 aaPredicted RBP9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 CCL15-CCL14A0A0B4J2E2 113 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 UNCXA6NJT0 531 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 CA12O43570 354 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 JAG1P78504 1218 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 CCL15Q16663 113 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 ERO1BQ86YB8 467 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 IFNL1Q8IU54 200 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 SMC5Q8IY18 1101 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 BRI3BPQ8WY22 251 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 PUS7LQ9H0K6 701 aaKnown RBP9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 RWDD1Q9H446 243 aaPredicted RBP9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 PRDM10Q9NQV6 1147 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 SAGE1Q9NXZ1 904 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 SIPA1L1O43166 1804 aa9.28□□□□□ -0.92
HMGB3P1-201ENST00000393368 SMIM22K7EJ46 135 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 GDF11O95390 407 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 CYP2D6P10635 497 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 MAP3K10Q02779 954 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 PPIL2Q13356 520 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 DGKZQ13574 1117 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 AAMPQ13685 434 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 NOL9Q5SY16 702 aaKnown RBP9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 REM2Q8IYK8 340 aaPredicted RBP9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 SCYL3Q8IZE3 742 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 TNS4Q8IZW8 715 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 FAM43AQ8N2R8 423 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 KBTBD3Q8NAB2 608 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 ZHX2Q9Y6X8 837 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.93
HMGB3P1-201ENST00000393368 CDK5RAP2Q96SN8 1893 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 CYP2D7A0A087X1C5 515 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 TRIM75PA6NK02 468 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 M0R2C6 588 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 IGSF3O75054 1194 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 GLRX3O76003 335 aaKnown RBP9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 PTPRAP18433 802 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 PLCD1P51178 756 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 GTF2A2P52657 109 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 PDE1AP54750 535 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 PPATQ06203 517 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 CRHR2Q13324 411 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 CHD1LQ86WJ1 897 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 CRACR2BQ8N4Y2 399 aaPredicted RBP9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 SEC62Q99442 399 aaKnown RBP9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 FSD1Q9BTV5 496 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 TRIM34Q9BYJ4 488 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 CRNKL1Q9BZJ0 848 aaKnown RBP9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 DHX36Q9H2U1 1008 aaKnown RBP9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 PICK1Q9NRD5 415 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 PI4KBQ9UBF8 816 aa9.26□□□□□ -0.93
HMGB3P1-201ENST00000393368 DDX60LQ5H9U9 1706 aaKnown RBP9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 AK9Q5TCS8 1911 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 BTBD19C9JJ37 291 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 ERC2O15083 957 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 RNF113AO15541 343 aaKnown RBP9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 TBC1D12O60347 775 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 CTNND1O60716 968 aaKnown RBP9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 POLR3DP05423 398 aaPredicted RBP9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 HLA-DOAP06340 250 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 NUCB1Q02818 461 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 SNAPC2Q13487 334 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 MOGSQ13724 837 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 UBE3CQ15386 1083 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 CHRDL2Q6WN34 429 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 SLC44A5Q8NCS7 719 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 ZNF296Q8WUU4 475 aaPredicted RBP9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 OSBP2Q969R2 916 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 DCP1AQ9NPI6 582 aaPredicted RBP9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 MCM9Q9NXL9 1143 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 SLC4A4Q9Y6R1 1079 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 FOCADQ5VW36 1801 aa9.25□□□□□ -0.93
HMGB3P1-201ENST00000393368 NAV1Q8NEY1 1877 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 GPR25O00155 361 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 ECM2O94769 699 aaPredicted RBP9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 CETPP11597 493 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 CAP2P40123 477 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 INHBEP58166 350 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 ZSCAN25Q6NSZ9 544 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 TMED8Q6PL24 325 aaPredicted RBP9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 METTL16Q86W50 562 aaKnown RBP9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 CERS3Q8IU89 383 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 DYNLL2Q96FJ2 89 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 STAP2Q9UGK3 403 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 HERC5Q9UII4 1024 aaKnown RBP9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 KCNH4Q9UQ05 1017 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 AFG3L2Q9Y4W6 797 aa9.24□□□□□ -0.93
HMGB3P1-201ENST00000393368 DOCK1Q14185 1865 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 LAMB1P07942 1786 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 GPAA1O43292 621 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 ALDH1A1P00352 501 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 PDE4AP27815 886 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 SHMT1P34896 483 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 CAP1Q01518 475 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 SPP2Q13103 211 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms